Homologs of GFF232 from Variovorax sp. SCN45

Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
SEED: Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
KEGG: lysine decarboxylase

169 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) cofit 100 100
o Variovorax sp. OAS795 ABID97_RS16535 arginine/lysine/ornithine decarboxylase strong 98 100
o Acidovorax sp. GW101-3H11 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no data 87 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) sig. 85 99
o Herbaspirillum seropedicae SmR1 HSERO_RS17280 lysine decarboxylase no data 76 100
o Dechlorosoma suillum PS Dsui_1245 arginine/lysine/ornithine decarboxylase no data 73 99
o Methylophilus sp. DMC18 GFF1062 Biodegradative arginine decarboxylase no data 74 100
o Castellaniella sp019104865 MT123 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase no data 73 100
o Cupriavidus basilensis FW507-4G11 RR42_RS15940 lysine decarboxylase no data 72 99
o Ralstonia solanacearum GMI1000 RS_RS11875 lysine decarboxylase no data 72 99
o Ralstonia solanacearum PSI07 RPSI07_RS13045 lysine decarboxylase no data 72 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS16180 arginine/lysine/ornithine decarboxylase strong 72 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04325 lysine decarboxylase no data 72 99
o Ralstonia solanacearum UW163 UW163_RS09345 lysine decarboxylase no data 72 99
o Paraburkholderia graminis OAS925 ABIE53_001270 arginine decarboxylase no data 72 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00160 ornithine decarboxylase no data 72 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS25000 arginine/lysine/ornithine decarboxylase no data 72 100
o Burkholderia phytofirmans PsJN BPHYT_RS04980 lysine decarboxylase no data 72 99
o Rhizobium sp. OAE497 ABIE40_RS23760 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 47 100
o Sinorhizobium meliloti 1021 SMa0682 decarboxylase (lysine, ornithine, arginine) insig. 48 99
o Pseudomonas orientalis W4I3 QF045_RS14775 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 48 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) insig. 47 99
o Pseudomonas sp. S08-1 OH686_03560 Lysine decarboxylase, inducible cofit 47 99
o Pseudomonas fluorescens SBW25 PFLU_RS12930 lysine decarboxylase insig. 48 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12930 lysine decarboxylase insig. 48 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02693 Biodegradative arginine decarboxylase cofit 48 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) insig. 47 99
o Pseudomonas simiae WCS417 PS417_12240 lysine decarboxylase insig. 47 99
o Pseudomonas stutzeri RCH2 Psest_2075 Arginine/lysine/ornithine decarboxylases insig. 48 99
o Pseudomonas fluorescens FW300-N2E3 AO353_23560 lysine decarboxylase insig. 47 99
o Pseudomonas protegens RBAN4 FABNJH_16870 Biodegradative arginine decarboxylase insig. 47 99
o Pseudomonas sp. SVBP6 COO64_RS19270 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 47 99
o Pseudomonas segetis P6 ACVTMO_RS13885 Orn/Lys/Arg family decarboxylase cofit 46 99
o Pseudomonas aeruginosa PA14 IKLFDK_08840 lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA insig. 46 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS54900 ldcA;inference=COORDINATES lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA insig. 46 99
o Pseudomonas aeruginosa MRSN321 DY961_RS20820 ldcA;inference=COORDINATES lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA insig. 46 99
o Pseudomonas sp. BP01 JOY50_RS07070 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 46 99
o Pseudomonas putida KT2440 PP_4140 lysine decarboxylase insig. 45 100
  Pseudomonas segetis P6 ACVTMO_RS18305 Orn/Lys/Arg family decarboxylase cofit 41 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3776 Arginine decarboxylase (EC 4.1.1.19) / Ornithine decarboxylase (EC 4.1.1.17) insig. 38 95
o Klebsiella michiganensis M5al BWI76_RS05300 lysine decarboxylase LdcC insig. 39 95
o Escherichia coli BL21 ECD_04002 lysine decarboxylase, acid-inducible insig. 37 97
o Escherichia coli ECOR27 NOLOHH_04740 cadA lysine decarboxylase CadA insig. 37 97
o Escherichia coli ECRC100 OKFHMN_12475 cadA lysine decarboxylase CadA cofit 37 97
o Escherichia coli ECRC101 MCAODC_02985 cadA lysine decarboxylase CadA insig. 37 97
o Escherichia coli ECRC102 NIAGMN_10320 cadA lysine decarboxylase CadA insig. 37 97
o Escherichia coli ECRC62 BNILDI_06750 cadA lysine decarboxylase CadA insig. 37 97
o Escherichia coli ECRC98 JDDGAC_16110 cadA lysine decarboxylase CadA insig. 37 97
o Escherichia coli ECRC99 KEDOAH_15690 cadA lysine decarboxylase CadA no data 37 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03912 Inducible lysine decarboxylase insig. 37 97
o Escherichia coli BW25113 b4131 cadA lysine decarboxylase 1 (NCBI) sig. 37 97
o Escherichia fergusonii Becca EFB2_04465 Biodegradative arginine decarboxylase insig. 36 99
  Escherichia fergusonii Becca EFB2_04451 Inducible lysine decarboxylase insig. 37 97
o Escherichia coli ECOR38 HEPCGN_11110 cadA lysine decarboxylase CadA insig. 37 97
o Escherichia coli Nissle 1917 ECOLIN_RS23905 lysine decarboxylase CadA insig. 37 97
  Escherichia coli ECRC100 OKFHMN_12550 adiA arginine decarboxylase cofit 36 99
  Escherichia coli ECRC101 MCAODC_03060 adiA arginine decarboxylase insig. 36 99
  Escherichia coli ECRC102 NIAGMN_10395 adiA arginine decarboxylase insig. 36 99
  Escherichia coli ECRC98 JDDGAC_16185 adiA arginine decarboxylase insig. 36 99
  Escherichia coli ECRC99 KEDOAH_15615 adiA arginine decarboxylase no data 36 99
  Escherichia coli ECOR38 HEPCGN_11185 adiA arginine decarboxylase insig. 36 99
  Escherichia coli BW25113 b4117 adiA biodegradative arginine decarboxylase (RefSeq) insig. 36 99
  Escherichia coli ECOR27 NOLOHH_04815 adiA arginine decarboxylase insig. 36 99
  Escherichia coli ECRC62 BNILDI_06675 adiA arginine decarboxylase cofit 36 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03927 Biodegradative arginine decarboxylase insig. 36 99
o Klebsiella pneumoniae MKP103 KDGMDA_13545 lysine decarboxylase LdcC insig. 39 96
o Klebsiella pneumoniae MRSN742743 KFA93_RS12000 lysine decarboxylase LdcC insig. 38 96
o Serratia liquefaciens MT49 IAI46_20145 lysine decarboxylase CadA insig. 38 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS15760 lysine decarboxylase LdcC insig. 39 96
o Rahnella sp. WP5 EX31_RS12950 lysine decarboxylase LdcC cofit 39 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1473 Arginine decarboxylase, catabolic (EC 4.1.1.19) insig. 36 99
  Escherichia coli BL21 ECD_03988 arginine decarboxylase insig. 36 99
  Escherichia coli Nissle 1917 ECOLIN_RS23825 arginine decarboxylase insig. 36 99
o Pantoea sp. MT58 IAI47_15445 lysine decarboxylase LdcC cofit 39 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) insig. 39 95
  Klebsiella pneumoniae MKP103 KDGMDA_15475 lysine decarboxylase CadA insig. 38 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS03135 cadA;inference=COORDINATES lysine decarboxylase CadA insig. 38 95
  Klebsiella michiganensis M5al BWI76_RS07195 lysine decarboxylase CadA insig. 37 97
o Enterobacter asburiae PDN3 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases insig. 38 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) insig. 38 97
  Serratia liquefaciens MT49 IAI46_20175 lysine decarboxylase LdcC insig. 37 95
o Enterobacter sp. TBS_079 MPMX20_00870 Constitutive lysine decarboxylase insig. 38 95
  Escherichia coli ECOR38 HEPCGN_08080 ldcC lysine decarboxylase LdcC insig. 38 96
  Escherichia coli ECRC100 OKFHMN_10125 ldcC lysine decarboxylase LdcC cofit 38 96
  Escherichia coli ECRC101 MCAODC_00640 ldcC lysine decarboxylase LdcC insig. 38 96
  Escherichia coli ECRC102 NIAGMN_07975 ldcC lysine decarboxylase LdcC insig. 38 96
  Escherichia coli ECRC99 KEDOAH_18030 ldcC lysine decarboxylase LdcC no data 38 96
  Escherichia coli ECOR27 NOLOHH_02470 ldcC lysine decarboxylase LdcC insig. 38 96
  Escherichia coli BL21 ECD_00184 lysine decarboxylase 2, constitutive cofit 38 96
  Escherichia coli ECRC62 BNILDI_09200 ldcC lysine decarboxylase LdcC insig. 38 96
  Escherichia coli ECRC98 JDDGAC_13720 ldcC lysine decarboxylase LdcC insig. 38 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03477 Constitutive lysine decarboxylase insig. 38 96
  Escherichia coli BW25113 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) insig. 38 96
  Escherichia coli Nissle 1917 ECOLIN_RS01010 lysine decarboxylase LdcC insig. 37 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_01445 lysine decarboxylase cofit 38 95
  Escherichia fergusonii Becca EFB2_03858 Constitutive lysine decarboxylase insig. 37 96
o Erwinia amylovora T8 OLJFJH_00545 lysine decarboxylase LdcC insig. 37 95
o Magnetospirillum magneticum AMB-1 AMB_RS05630 amino acid decarboxylase insig. 36 99
o Rhodopseudomonas palustris CGA009 TX73_010575 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 35 99
  Pseudomonas segetis P6 ACVTMO_RS18310 Orn/Lys/Arg family decarboxylase cofit 35 97
o Azospirillum brasilense Sp245 AZOBR_RS27535 amino acid decarboxylase insig. 35 99
o Azospirillum sp. SherDot2 MPMX19_05197 Inducible ornithine decarboxylase insig. 35 99
  Rhizobium sp. OAE497 ABIE40_RS23765 ornithine decarboxylase insig. 33 97
  Sinorhizobium meliloti 1021 SMa0680 amino acid (ornithine, lysine, arginine) decarboxylase insig. 33 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS33025 ornithine decarboxylase insig. 32 96
  Enterobacter asburiae PDN3 EX28DRAFT_2285 ornithine decarboxylase SpeF insig. 32 89
  Enterobacter sp. TBS_079 MPMX20_01336 Inducible ornithine decarboxylase insig. 32 89
  Shewanella sp. ANA-3 Shewana3_3871 ornithine decarboxylase (RefSeq) cofit 32 89
  Escherichia coli ECRC100 OKFHMN_07090 speF ornithine decarboxylase SpeF cofit 31 92
  Escherichia coli ECRC101 MCAODC_26305 speF ornithine decarboxylase SpeF insig. 31 92
  Escherichia coli ECRC102 NIAGMN_05145 speF ornithine decarboxylase SpeF insig. 31 92
  Escherichia coli ECRC98 JDDGAC_10740 speF ornithine decarboxylase SpeF insig. 31 92
  Escherichia coli ECRC99 KEDOAH_20880 speF ornithine decarboxylase SpeF no data 31 92
  Escherichia coli ECOR27 NOLOHH_23470 speF ornithine decarboxylase SpeF insig. 31 92
  Escherichia coli ECRC62 BNILDI_21475 speF ornithine decarboxylase SpeF cofit 31 92
  Escherichia coli Nissle 1917 ECOLIN_RS03740 ornithine decarboxylase SpeF no data 31 92
  Escherichia coli BL21 ECD_00649 ornithine decarboxylase isozyme, inducible insig. 31 90
  Klebsiella pneumoniae MKP103 KDGMDA_04675 ornithine decarboxylase insig. 32 91
  Escherichia fergusonii Becca EFB2_03404 Inducible ornithine decarboxylase insig. 31 92
  Escherichia coli BW25113 b0693 speF ornithine decarboxylase isozyme, inducible (NCBI) insig. 31 90
  Escherichia coli ECOR38 HEPCGN_01145 speF ornithine decarboxylase SpeF insig. 31 90
  Klebsiella pneumoniae MRSN742743 KFA93_RS12220 ornithine decarboxylase insig. 32 91
  Serratia liquefaciens MT49 IAI46_02040 ornithine decarboxylase SpeF insig. 31 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4604 Ornithine decarboxylase (EC 4.1.1.17) insig. 31 92
  Shewanella oneidensis MR-1 SO0314 speF ornithine decarboxylase, inducible (NCBI ptt file) cofit 31 89
  Klebsiella michiganensis M5al BWI76_RS24175 ornithine decarboxylase strong 31 91
  Enterobacter sp. TBS_079 MPMX20_03832 Constitutive ornithine decarboxylase insig. 32 91
  Shewanella amazonensis SB2B Sama_3334 ornithine decarboxylase (RefSeq) cofit 31 89
  Escherichia coli Nissle 1917 ECOLIN_RS16490 ornithine decarboxylase insig. 32 91
  Enterobacter asburiae PDN3 EX28DRAFT_3012 Arginine/lysine/ornithine decarboxylases insig. 32 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_19405 ornithine decarboxylase SpeF insig. 31 89
  Escherichia coli BW25113 b2965 speC ornithine decarboxylase isozyme (VIMSS) insig. 31 91
  Escherichia coli ECOR38 HEPCGN_18450 speC ornithine decarboxylase insig. 31 91
  Escherichia coli ECRC100 OKFHMN_19180 speC ornithine decarboxylase cofit 31 91
  Escherichia coli ECRC101 MCAODC_09700 speC ornithine decarboxylase insig. 31 91
  Escherichia coli ECRC102 NIAGMN_16945 speC ornithine decarboxylase insig. 31 91
  Escherichia coli ECRC98 JDDGAC_22810 speC ornithine decarboxylase insig. 31 91
  Escherichia coli ECRC99 KEDOAH_08960 speC ornithine decarboxylase no data 31 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00751 Constitutive ornithine decarboxylase insig. 31 91
  Escherichia coli BL21 ECD_02795 ornithine decarboxylase, constitutive cofit 31 91
  Serratia liquefaciens MT49 IAI46_21480 ornithine decarboxylase SpeF insig. 30 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3070 Ornithine decarboxylase (EC 4.1.1.17) insig. 34 81
  Escherichia fergusonii Becca EFB2_00937 Constitutive ornithine decarboxylase insig. 31 91
  Escherichia coli ECRC62 BNILDI_09625 speC ornithine decarboxylase insig. 31 91
  Escherichia coli ECOR27 NOLOHH_11040 speC ornithine decarboxylase insig. 31 91
  Erwinia amylovora T8 OLJFJH_08475 ornithine decarboxylase insig. 33 80
  Pectobacterium carotovorum WPP14 HER17_RS16680 ornithine decarboxylase insig. 33 82
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS03780 ornithine decarboxylase cofit 31 92
  Pantoea sp. MT58 IAI47_03545 ornithine decarboxylase insig. 32 80
  Dickeya dianthicola ME23 DZA65_RS05225 ornithine decarboxylase insig. 33 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03520 speF ornithine decarboxylase cofit 31 92
  Erwinia tracheiphila SCR3 LU632_RS05390 ornithine decarboxylase strong 31 92
  Dickeya dadantii 3937 DDA3937_RS04870 ornithine decarboxylase insig. 32 82
  Rahnella sp. WP5 EX31_RS02805 ornithine decarboxylase SpeF insig. 31 86
  Dickeya dianthicola 67-19 HGI48_RS04890 ornithine decarboxylase insig. 32 82
  Pseudomonas sp. BP01 JOY50_RS10670 ornithine decarboxylase insig. 28 79
  Alteromonas macleodii MIT1002 MIT1002_02902 Arginine decarboxylase insig. 27 84
  Kangiella aquimarina DSM 16071 B158DRAFT_0656 Arginine/lysine/ornithine decarboxylases insig. 32 48
  Mycobacterium tuberculosis H37Rv Rv2531c Probable amino acid decarboxylase sig. 27 75
  Cupriavidus basilensis FW507-4G11 RR42_RS26025 ornithine decarboxylase insig. 25 76
  Pseudomonas aeruginosa MRSN321 DY961_RS19080 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein insig. 31 39
  Pseudomonas aeruginosa PA14 IKLFDK_06405 lysine decarboxylase sig. 31 39
  Pseudomonas aeruginosa PUPa3 DQ20_RS53205 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme insig. 31 39
  Lysobacter sp. OAE881 ABIE51_RS09660 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme insig. 29 46
  Fusobacterium nucleatum SB010 HUW76_07545 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme strong 25 78
  Synechococcus elongatus PCC 7942 Synpcc7942_0707 cad arginine decarboxylase strong 27 39
  Synechocystis sp000284455 PCC 6803 SGL_RS02955 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme strong 25 43
  Kangiella aquimarina DSM 16071 B158DRAFT_0656 Arginine/lysine/ornithine decarboxylases insig. 41 10
  Synechocystis sp000284455 PCC 6803 SGL_RS02955 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme strong 40 7