Homologs of Psest_1684 from Pseudomonas stutzeri RCH2

Predicted metal-binding, possibly nucleic acid-binding protein
SEED: COG1399 protein, clustered with ribosomal protein L32p
KEGG: uncharacterized protein

67 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_1684 Predicted metal-binding, possibly nucleic acid-binding protein no data 100 100
o Pseudomonas sp. RS175 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD no data 77 100
o Pseudomonas fluorescens FW300-N2C3 AO356_20145 metal-binding protein no data 75 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5948 COG1399 protein, clustered with ribosomal protein L32p no data 75 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2101 COG1399 protein, clustered with ribosomal protein L32p no data 74 100
o Pseudomonas putida KT2440 PP_1910 conserved protein of unknown function no data 75 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_455 COG1399 protein, clustered with ribosomal protein L32p no data 74 100
o Pseudomonas fluorescens FW300-N2E3 AO353_01385 metal-binding protein no data 74 100
o Pseudomonas simiae WCS417 PS417_21460 metal-binding protein no data 74 100
o Pseudomonas fluorescens SBW25 PFLU_RS23075 hypothetical protein insig. 73 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23075 hypothetical protein no data 73 100
o Pseudomonas syringae pv. syringae B728a Psyr_1643 Protein of unknown function DUF177 no data 74 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1643 Protein of unknown function DUF177 no data 74 100
  Pseudomonas sp. S08-1 OH686_22120 protein, clustered with ribosomal protein L32p no data 83 60
o Enterobacter sp. TBS_079 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD sig. 35 98
o Enterobacter asburiae PDN3 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein insig. 35 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD insig. 35 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3370 COG1399 protein, clustered with ribosomal protein L32p cofit 34 98
o Escherichia coli BL21 ECD_01084 DUF177 family protein strong 34 98
o Escherichia fergusonii Becca EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD strong 34 98
o Escherichia coli ECOR27 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD no data 34 98
o Escherichia coli ECOR38 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD strong 34 98
o Escherichia coli ECRC101 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD insig. 34 98
o Escherichia coli ECRC101 MCAODC_22960 yceD 23S rRNA accumulation protein YceD no data 34 98
o Escherichia coli ECRC102 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD sig. 34 98
o Escherichia coli ECRC62 BNILDI_19290 yceD 23S rRNA accumulation protein YceD no data 34 98
o Escherichia coli ECRC98 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD no data 34 98
o Escherichia coli ECRC99 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD no data 34 98
o Escherichia coli Nissle 1917 ECOLIN_RS06290 23S rRNA accumulation protein YceD insig. 34 98
o Escherichia coli BW25113 b1088 yceD hypothetical protein (NCBI) strong 34 98
o Dickeya dadantii 3937 DDA3937_RS13145 23S rRNA accumulation protein YceD strong 34 98
o Dickeya dianthicola 67-19 HGI48_RS13210 23S rRNA accumulation protein YceD insig. 34 98
o Alteromonas macleodii MIT1002 MIT1002_01728 hypothetical protein no data 35 98
o Pectobacterium carotovorum WPP14 HER17_RS08625 23S rRNA accumulation protein YceD insig. 34 98
o Dickeya dianthicola ME23 DZA65_RS13680 23S rRNA accumulation protein YceD no data 34 98
o Erwinia tracheiphila SCR3 LU632_RS14845 yceD 23S rRNA accumulation protein YceD insig. 33 98
o Klebsiella michiganensis M5al BWI76_RS11065 hypothetical protein no data 35 98
o Rahnella sp. WP5 EX31_RS24410 23S rRNA accumulation protein YceD cofit 32 98
o Pantoea sp. MT58 IAI47_12095 23S rRNA accumulation protein YceD no data 35 98
o Shewanella loihica PV-4 Shew_1598 hypothetical protein (RefSeq) no data 34 94
o Shewanella oneidensis MR-1 SO2781 conserved hypothetical protein (NCBI ptt file) no data 33 94
o Serratia liquefaciens MT49 IAI46_09765 23S rRNA accumulation protein YceD no data 33 98
o Shewanella sp. ANA-3 Shewana3_2563 hypothetical protein (RefSeq) no data 33 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06190 YceD family protein cofit 36 95
o Lysobacter sp. OAE881 ABIE51_RS13965 YceD family protein no data 33 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_10120 23S rRNA accumulation protein YceD no data 34 98
o Marinobacter adhaerens HP15 HP15_2217 protein containing DUF177 no data 36 95
o Shewanella amazonensis SB2B Sama_1985 hypothetical protein (RefSeq) no data 32 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4000.1 COG1399 protein, clustered with ribosomal protein L32p insig. 29 97
o Variovorax sp. OAS795 ABID97_RS08285 DUF177 domain-containing protein no data 34 94
o Acidovorax sp. GW101-3H11 Ac3H11_1583 COG1399 protein, clustered with ribosomal protein L32p cofit 30 94
o Dechlorosoma suillum PS Dsui_2443 putative metal-binding protein, possibly nucleic-acid binding protein insig. 32 92
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14405 metal-binding protein no data 33 97
o Ralstonia solanacearum UW163 UW163_RS11870 metal-binding protein no data 33 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS10120 YceD family protein insig. 36 74
o Herbaspirillum seropedicae SmR1 HSERO_RS09580 DNA-binding protein no data 32 85
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3330 COG1399 protein, clustered with ribosomal protein L32p no data 31 94
o Rhodanobacter sp. FW510-T8 OKGIIK_05695 Large ribosomal RNA subunit accumulation protein YceD insig. 35 86
o Kangiella aquimarina DSM 16071 B158DRAFT_1758 Predicted metal-binding, possibly nucleic acid-binding protein strong 29 95
o Ralstonia solanacearum GMI1000 RS_RS05185 metal-binding protein insig. 35 91
o Rhodanobacter denitrificans MT42 LRK55_RS00980 YceD family protein no data 34 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01205 YceD family protein no data 33 86
o Acinetobacter radioresistens SK82 MPMX26_02444 Large ribosomal RNA subunit accumulation protein YceD no data 33 99
o Castellaniella sp019104865 MT123 ABCV34_RS08395 YceD family protein insig. 27 93
o Ralstonia solanacearum PSI07 RPSI07_RS19055 metal-binding protein no data 34 91
  Variovorax sp. SCN45 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p insig. 33 68
  Cupriavidus basilensis FW507-4G11 RR42_RS14125 metal-binding protein strong 39 58