Homologs of GFF1139 from Variovorax sp. SCN45

Domain of unknown function / Efflux ABC transporter, permease protein
SEED: ABC-type multidrug transport system, permease component
KEGG: antibiotic transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1139 Domain of unknown function / Efflux ABC transporter, permease protein cofit 100 100
o Acidovorax sp. GW101-3H11 Ac3H11_500 ABC-type multidrug transport system, permease component sig. 72 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4706 ABC-type multidrug transport system, permease component insig. 51 89
o Acinetobacter baumannii LAC-4 RR41_RS04505 ABC transporter permease insig. 30 90
o Sphingobium sp. HT1-2 GFF5104 hypothetical protein cofit 36 89
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10090 ABC transporter permease strong 33 89
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02190 ABC transporter permease cofit 32 89
o Phocaeicola dorei CL03T12C01 ABI39_RS01380 ABC transporter permease insig. 31 89
  Sphingobium sp. HT1-2 GFF4737 Efflux ABC transporter, permease protein cofit 38 89
o Acinetobacter radioresistens SK82 MPMX26_02223 hypothetical protein no data 31 90
o Bacteroides stercoris CC31F HMPREF1181_RS06680 ABC transporter permease cofit 30 88
o Shewanella loihica PV-4 Shew_0414 ABC-2 type transporter (RefSeq) strong 35 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_08090 ABC transporter permease insig. 33 87
o Shewanella amazonensis SB2B Sama_0480 hypothetical protein (RefSeq) strong 33 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3864 ABC-type multidrug transport system, permease component insig. 38 89
o Bacteroides ovatus ATCC 8483 BACOVA_00760 ABC-2 type transporter insig. 33 93
  Bacteroides ovatus ATCC 8483 BACOVA_01125 ABC-2 type transporter strong 29 93
o Pectobacterium carotovorum WPP14 HER17_RS19375 ABC transporter permease insig. 33 87
o Bacteroides thetaiotaomicron VPI-5482 BT3902 conserved hypothetical protein (NCBI ptt file) strong 29 93
  Bacteroides stercoris CC31F HMPREF1181_RS10530 ABC transporter permease insig. 32 93
o Shewanella oneidensis MR-1 SO4087 conserved hypothetical protein (NCBI ptt file) strong 34 87
  Bacteroides thetaiotaomicron VPI-5482 BT0957 conserved hypothetical protein (NCBI ptt file) sig. 32 93
o Shewanella sp. ANA-3 Shewana3_3637 hypothetical protein (RefSeq) strong 32 87
o Azospirillum sp. SherDot2 MPMX19_04496 hypothetical protein insig. 33 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02385 ABC transporter permease cofit 40 83
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10210 ABC transporter permease insig. 29 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06105 ABC transporter permease sig. 26 89
  Phocaeicola dorei CL03T12C01 ABI39_RS17920 ABC transporter permease insig. 25 89
o Pseudomonas aeruginosa MRSN321 DY961_RS15935 ABC transporter permease insig. 28 83
o Pseudomonas aeruginosa PA14 IKLFDK_17450 ABC transporter permease insig. 28 83
o Pseudomonas aeruginosa PUPa3 DQ20_RS41145 ABC transporter permease insig. 28 83
o Serratia liquefaciens MT49 IAI46_02000 ABC transporter permease insig. 29 83
o Rahnella sp. WP5 EX31_RS08490 ABC transporter permease insig. 27 86
  Variovorax sp. SCN45 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein cofit 30 89
  Acidovorax sp. GW101-3H11 Ac3H11_501 ABC-type multidrug transport system, permease component strong 30 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_08085 ABC transporter permease insig. 27 84
  Pectobacterium carotovorum WPP14 HER17_RS19370 ABC transporter permease insig. 27 78
  Shewanella oneidensis MR-1 SO4088 conserved hypothetical protein (NCBI ptt file) strong 25 85
  Shewanella amazonensis SB2B Sama_0479 hypothetical protein (RefSeq) strong 28 79
  Shewanella sp. ANA-3 Shewana3_3638 ABC-2 type transporter (RefSeq) strong 25 85
  Bacteroides stercoris CC31F HMPREF1181_RS10530 ABC transporter permease insig. 25 79
  Azospirillum sp. SherDot2 MPMX19_04495 hypothetical protein insig. 36 37
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4707 ABC-type multidrug transport system, permease component insig. 28 85
  Bacteroides thetaiotaomicron VPI-5482 BT0564 putative ABC transporter permease protein (NCBI ptt file) insig. 22 93
  Marinobacter adhaerens HP15 HP15_1351 ABC-type multidrug transport system, permease component insig. 21 85
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS14420 ABC transporter permease insig. 27 85
  Shewanella oneidensis MR-1 SO1707 ABC transporter, permease protein, putative (NCBI ptt file) insig. 24 92
  Acinetobacter baumannii LAC-4 RR41_RS04510 ABC transporter permease insig. 23 60
  Shewanella sp. ANA-3 Shewana3_2748 ABC-2 type transporter (RefSeq) insig. 25 92
  Shewanella loihica PV-4 Shew_0413 ABC-2 type transporter (RefSeq) sig. 25 73
  Bacteroides thetaiotaomicron VPI-5482 BT0956 conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) strong 24 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10215 ABC transporter permease insig. 24 79
o Castellaniella sp019104865 MT123 ABCV34_RS01295 ABC transporter permease insig. 28 81
  Shewanella amazonensis SB2B Sama_3587 ABC transporter, permease protein, putative (RefSeq) insig. 24 81
o Cupriavidus basilensis FW507-4G11 RR42_RS02285 mannose-1-phosphate guanyltransferase insig. 23 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06100 ABC transporter permease insig. 23 78
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03450 ABC-2 type transport system permease protein insig. 23 82
o Lysobacter sp. OAE881 ABIE51_RS15475 ABC transporter permease insig. 23 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3863 ABC-type multidrug transport system, permease component insig. 30 86
  Paraburkholderia graminis OAS925 ABIE53_005374 ABC-2 type transport system permease protein insig. 23 79
  Phocaeicola dorei CL03T12C01 ABI39_RS17925 ABC transporter permease insig. 22 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_08340 ABC transporter permease insig. 23 81
  Bacteroides ovatus ATCC 8483 BACOVA_03723 ABC-2 type transporter insig. 22 94
  Shewanella loihica PV-4 Shew_0425 ABC-2 type transporter (RefSeq) insig. 25 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03845 ABC transporter permease sig. 22 94
  Sphingobium sp. HT1-2 GFF4736 hypothetical protein insig. 33 46
  Bacteroides ovatus ATCC 8483 BACOVA_01126 ABC-2 type transporter strong 27 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10095 ABC transporter permease strong 25 81
  Phocaeicola dorei CL03T12C01 ABI39_RS01375 ABC transporter permease insig. 25 79
o Dechlorosoma suillum PS Dsui_2340 ABC-type multidrug transport system, permease component cofit 24 81
  Bacteroides thetaiotaomicron VPI-5482 BT3903 conserved hypothetical protein (NCBI ptt file) strong 26 79
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS14190 ABC transporter permease sig. 27 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS17395 ABC transporter permease insig. 24 69
o Rhodanobacter denitrificans MT42 LRK55_RS13910 ABC transporter permease insig. 27 85
  Phocaeicola dorei CL03T12C01 ABI39_RS17380 ABC transporter permease insig. 22 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF692 ABC transport system, permease component YbhS insig. 21 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02185 ABC transporter permease cofit 25 79
  Azospirillum sp. SherDot2 MPMX19_01922 putative multidrug ABC transporter permease YbhS insig. 23 81
  Rahnella sp. WP5 EX31_RS00870 ABC transporter permease insig. 23 81
  Ralstonia solanacearum GMI1000 RS_RS00815 ABC transporter permease insig. 23 82
  Bacteroides ovatus ATCC 8483 BACOVA_00759 hypothetical protein insig. 21 71
  Pseudomonas aeruginosa PUPa3 DQ20_RS41150 ABC transporter permease insig. 27 64
  Pseudomonas aeruginosa PA14 IKLFDK_17455 antibiotic ABC transporter permease insig. 27 64
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10200 ABC transporter permease insig. 23 82
  Ralstonia solanacearum UW163 UW163_RS03380 ABC transporter permease insig. 23 82
o Xanthobacter sp. DMC5 GFF4621 putative multidrug ABC transporter permease YbhS insig. 22 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07745 ABC transporter permease insig. 22 78
  Erwinia tracheiphila SCR3 LU632_RS22030 ABC transporter permease insig. 21 78
  Pseudomonas aeruginosa MRSN321 DY961_RS15930 ABC transporter permease insig. 26 64
  Rhodanobacter denitrificans MT42 LRK55_RS13905 ABC transporter permease insig. 24 85
  Acinetobacter radioresistens SK82 MPMX26_02222 hypothetical protein no data 24 42
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02385 ABC transporter permease cofit 33 34
  Castellaniella sp019104865 MT123 ABCV34_RS01300 ABC transporter permease insig. 24 85
  Rahnella sp. WP5 EX31_RS08495 ABC transporter permease insig. 24 86
  Bacteroides stercoris CC31F HMPREF1181_RS06675 ABC transporter permease insig. 23 79
o Desulfovibrio vulgaris Hildenborough JW710 DVU0127 membrane protein, putative (TIGR) sig. 22 84
  Ralstonia sp. UNC404CL21Col ABZR87_RS05685 ABC transporter permease insig. 21 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14185 ABC transporter permease sig. 24 85
  Sinorhizobium meliloti 1021 SM_b21204 ABC transporter permease insig. 25 84
  Azospirillum brasilense Sp245 AZOBR_RS05700 mannose-1-phosphate guanyltransferase insig. 23 85