| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Dickeya dianthicola ME23 | DZA65_RS13680 | | 23S rRNA accumulation protein YceD | no data | 100 | 100 |
| o | Dickeya dianthicola 67-19 | HGI48_RS13210 | | 23S rRNA accumulation protein YceD | insig. | 98 | 100 |
| o | Dickeya dadantii 3937 | DDA3937_RS13145 | | 23S rRNA accumulation protein YceD | strong | 97 | 100 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS08625 | | 23S rRNA accumulation protein YceD | insig. | 90 | 100 |
| o | Rahnella sp. WP5 | EX31_RS24410 | | 23S rRNA accumulation protein YceD | cofit | 83 | 99 |
| o | Escherichia coli BL21 | ECD_01084 | | DUF177 family protein | strong | 82 | 100 |
| o | Escherichia fergusonii Becca | EFB2_02887 | | Large ribosomal RNA subunit accumulation protein YceD | strong | 82 | 100 |
| o | Escherichia coli ECOR27 | NOLOHH_21130 | yceD | 23S rRNA accumulation protein YceD | sig. | 82 | 100 |
| o | Escherichia coli ECOR38 | HEPCGN_23880 | yceD | 23S rRNA accumulation protein YceD | strong | 82 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_03600 | yceD | 23S rRNA accumulation protein YceD | cofit | 82 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_22960 | yceD | 23S rRNA accumulation protein YceD | strong | 82 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_24230 | yceD | 23S rRNA accumulation protein YceD | strong | 82 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_19290 | yceD | 23S rRNA accumulation protein YceD | strong | 82 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_07260 | yceD | 23S rRNA accumulation protein YceD | strong | 82 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_24155 | yceD | 23S rRNA accumulation protein YceD | no data | 82 | 100 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS06290 | | 23S rRNA accumulation protein YceD | cofit | 82 | 100 |
| o | Escherichia coli BW25113 | b1088 | yceD | hypothetical protein (NCBI) | strong | 82 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02578 | | Large ribosomal RNA subunit accumulation protein YceD | insig. | 81 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3370 | | COG1399 protein, clustered with ribosomal protein L32p | cofit | 81 | 100 |
| o | Erwinia amylovora T8 | OLJFJH_15555 | | 23S rRNA accumulation protein YceD | sig. | 79 | 100 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1841 | | Predicted metal-binding, possibly nucleic acid-binding protein | insig. | 79 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_01768 | | Large ribosomal RNA subunit accumulation protein YceD | sig. | 80 | 100 |
| o | Erwinia tracheiphila SCR3 | LU632_RS14845 | yceD | 23S rRNA accumulation protein YceD | insig. | 75 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_09765 | | 23S rRNA accumulation protein YceD | no data | 82 | 100 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_00705 | yceD | 23S rRNA accumulation protein YceD | no data | 75 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_18670 | | 23S rRNA accumulation protein YceD | sig. | 80 | 100 |
| o | Klebsiella pneumoniae MRSN742743 | KFA93_RS00220 | yceD;inference=COORDINATES | 23S rRNA accumulation protein YceD | no data | 80 | 100 |
| o | Klebsiella michiganensis M5al | BWI76_RS11065 | | hypothetical protein | no data | 78 | 100 |
| o | Pantoea sp. MT58 | IAI47_12095 | | 23S rRNA accumulation protein YceD | no data | 77 | 100 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS12155 | yceD | 23S rRNA accumulation protein YceD | cofit | 76 | 100 |
| o | Alteromonas macleodii MIT1002 | MIT1002_01728 | | hypothetical protein | no data | 48 | 99 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_10120 | | 23S rRNA accumulation protein YceD | no data | 47 | 99 |
| o | Shewanella loihica PV-4 | Shew_1598 | | hypothetical protein (RefSeq) | no data | 42 | 100 |
| o | Shewanella oneidensis MR-1 | SO2781 | | conserved hypothetical protein (NCBI ptt file) | no data | 41 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_2563 | | hypothetical protein (RefSeq) | no data | 41 | 100 |
| o | Shewanella amazonensis SB2B | Sama_1985 | | hypothetical protein (RefSeq) | no data | 41 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS02120 | | YceD family protein | no data | 36 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_15115 | | metal-binding protein | strong | 36 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS33465 | | DUF177 domain-containing protein | no data | 36 | 99 |
| o | Pseudomonas stutzeri RCH2 | Psest_1684 | | Predicted metal-binding, possibly nucleic acid-binding protein | no data | 34 | 99 |
| | Pseudomonas segetis P6 | ACVTMO_RS10290 | | YceD family protein | no data | 29 | 99 |
| | Marinobacter adhaerens HP15 | HP15_2217 | | protein containing DUF177 | no data | 34 | 98 |
| | Lysobacter sp. OAE881 | ABIE51_RS13965 | | YceD family protein | no data | 34 | 97 |
| | Pseudomonas sp. RS175 | PFR28_03014 | | Large ribosomal RNA subunit accumulation protein YceD | no data | 29 | 97 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4000.1 | | COG1399 protein, clustered with ribosomal protein L32p | insig. | 32 | 98 |
| | Pseudomonas sp. S08-1 | OH686_22120 | | protein, clustered with ribosomal protein L32p | no data | 37 | 59 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS06190 | | YceD family protein | cofit | 29 | 98 |
| | Pseudomonas putida KT2440 | PP_1910 | | conserved protein of unknown function | no data | 31 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS08285 | | DUF177 domain-containing protein | no data | 37 | 62 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10120 | | YceD family protein | insig. | 38 | 71 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14405 | | metal-binding protein | no data | 37 | 68 |
| | Ralstonia solanacearum UW163 | UW163_RS11870 | | metal-binding protein | no data | 37 | 68 |
| | Methylophilus sp. DMC18 | GFF1262 | | hypothetical protein | cofit | 36 | 61 |
| | Pseudomonas sp. SVBP6 | COO64_RS05825 | | YceD family protein | no data | 30 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1583 | | COG1399 protein, clustered with ribosomal protein L32p | sig. | 36 | 58 |
| | Variovorax sp. SCN45 | GFF3854 | | FIG01269488: protein, clustered with ribosomal protein L32p | insig. | 35 | 69 |
| | Pseudomonas sp. BP01 | JOY50_RS16810 | | YceD family protein | no data | 29 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS14125 | | metal-binding protein | strong | 36 | 65 |
| | Dechlorosoma suillum PS | Dsui_2443 | | putative metal-binding protein, possibly nucleic-acid binding protein | insig. | 32 | 82 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23075 | | hypothetical protein | insig. | 30 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23075 | | hypothetical protein | no data | 30 | 97 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1758 | | Predicted metal-binding, possibly nucleic acid-binding protein | strong | 44 | 60 |
| | Pseudomonas protegens RBAN4 | FABNJH_09285 | yceD | 23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria) | insig. | 30 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS05185 | | metal-binding protein | insig. | 38 | 68 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04436 | | Large ribosomal RNA subunit accumulation protein YceD | no data | 30 | 97 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08395 | | YceD family protein | insig. | 36 | 66 |
| | Pseudomonas sp. DMC3 | GFF4761 | | Large ribosomal RNA subunit accumulation protein YceD | no data | 28 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_20145 | | metal-binding protein | no data | 28 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5948 | | COG1399 protein, clustered with ribosomal protein L32p | no data | 28 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS19055 | | metal-binding protein | no data | 38 | 68 |
| | Pseudomonas orientalis W4I3 | QF045_RS23540 | | YceD family protein | no data | 29 | 97 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2101 | | COG1399 protein, clustered with ribosomal protein L32p | no data | 28 | 97 |
| | Pseudomonas simiae WCS417 | PS417_21460 | | metal-binding protein | no data | 29 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_455 | | COG1399 protein, clustered with ribosomal protein L32p | no data | 28 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_01385 | | metal-binding protein | no data | 28 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09580 | | DNA-binding protein | no data | 27 | 83 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1643 | | Protein of unknown function DUF177 | no data | 29 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1643 | | Protein of unknown function DUF177 | no data | 29 | 97 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_05695 | | Large ribosomal RNA subunit accumulation protein YceD | sig. | 27 | 89 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS08865 | | YceD family protein | no data | 27 | 89 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS00980 | | YceD family protein | no data | 27 | 89 |
| | Acinetobacter baumannii LAC-4 | RR41_RS15190 | | DUF177 domain-containing protein | strong | 28 | 100 |
| | Acinetobacter radioresistens SK82 | MPMX26_02444 | | Large ribosomal RNA subunit accumulation protein YceD | no data | 28 | 100 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01205 | | YceD family protein | no data | 27 | 89 |