Homologs of CSW01_00370 from Vibrio cholerae E7946 ATCC 55056

LysR family transcriptional regulator
SEED: LysR-family transcriptional regulator VC0068

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_00370 LysR family transcriptional regulator insig. 100 100
o Shewanella loihica PV-4 Shew_3589 LysR family transcriptional regulator (RefSeq) insig. 47 93
o Shewanella sp. ANA-3 Shewana3_3949 LysR family transcriptional regulator (RefSeq) insig. 49 93
o Shewanella oneidensis MR-1 SO4556 transcriptional regulator, LysR family (NCBI ptt file) insig. 48 93
o Shewanella amazonensis SB2B Sama_3449 regulatory protein, LysR (RefSeq) strong 48 93
  Shewanella sp. ANA-3 Shewana3_3932 transcriptional regulator (RefSeq) insig. 44 92
  Shewanella loihica PV-4 Shew_1773 LysR family transcriptional regulator (RefSeq) insig. 42 86
  Shewanella oneidensis MR-1 SO4525.1 hypothetical transcriptional regulator, LysR family (NCBI ptt file) insig. 43 69
  Shewanella oneidensis MR-1 SO2409 transcriptional regulator, LysR family (NCBI ptt file) insig. 32 93
o Pseudomonas sp. SVBP6 COO64_RS24425 LysR family transcriptional regulator insig. 30 92
o Escherichia coli BW25113 b3711 yidZ predicted DNA-binding transcriptional regulator (NCBI) sig. 32 88
o Escherichia coli BL21 ECD_03595 putative DNA-binding transcriptional regulator insig. 32 88
o Escherichia fergusonii Becca EFB2_04921 HTH-type transcriptional regulator YidZ insig. 32 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04342 HTH-type transcriptional regulator YidZ insig. 32 88
  Pseudomonas stutzeri RCH2 Psest_2127 Transcriptional regulator insig. 31 91
o Escherichia coli ECOR38 HEPCGN_13655 yidZ HTH-type transcriptional regulator YidZ insig. 32 88
o Escherichia coli Nissle 1917 ECOLIN_RS21370 HTH-type transcriptional regulator YidZ insig. 32 88
  Pseudomonas sp. BP01 JOY50_RS04680 LysR family transcriptional regulator insig. 30 92
  Shewanella loihica PV-4 Shew_2857 LysR family transcriptional regulator (RefSeq) insig. 33 92
o Escherichia coli ECRC62 BNILDI_04430 yidZ HTH-type transcriptional regulator YidZ insig. 32 88
o Pseudomonas sp. RS175 PFR28_03920 Nodulation protein D 2 insig. 34 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1743 Putative LysR-family transcriptional regulator YidZ insig. 32 88
o Escherichia coli ECOR27 NOLOHH_07100 yidZ HTH-type transcriptional regulator YidZ insig. 32 88
o Escherichia coli ECRC100 OKFHMN_14950 yidZ HTH-type transcriptional regulator YidZ cofit 31 88
o Escherichia coli ECRC101 MCAODC_05460 yidZ HTH-type transcriptional regulator YidZ insig. 31 88
o Escherichia coli ECRC102 NIAGMN_12705 yidZ HTH-type transcriptional regulator YidZ insig. 31 88
o Escherichia coli ECRC98 JDDGAC_18570 yidZ HTH-type transcriptional regulator YidZ insig. 31 88
o Escherichia coli ECRC99 KEDOAH_13200 yidZ HTH-type transcriptional regulator YidZ no data 31 88
  Pseudomonas putida KT2440 PP_2436 Transcriptional regulator, LysR family strong 30 92
o Enterobacter sp. TBS_079 MPMX20_04648 HTH-type transcriptional regulator YidZ insig. 33 87
o Enterobacter asburiae PDN3 EX28DRAFT_3995 Transcriptional regulator insig. 33 87
o Pseudomonas aeruginosa MRSN321 DY961_RS11810 LysR family transcriptional regulator insig. 33 91
o Pseudomonas aeruginosa PA14 IKLFDK_27530 LysR family transcriptional regulator insig. 33 91
o Pseudomonas aeruginosa PUPa3 DQ20_RS50300 LysR family transcriptional regulator insig. 33 91
o Klebsiella pneumoniae MKP103 KDGMDA_08715 HTH-type transcriptional regulator YidZ insig. 33 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS33090 LysR family transcriptional regulator insig. 33 90
  Shewanella sp. ANA-3 Shewana3_3586 DNA-binding transcriptional regulator YidZ (RefSeq) sig. 31 93
  Pseudomonas simiae WCS417 PS417_06950 LysR family transcriptional regulator insig. 32 95
  Pseudomonas fluorescens SBW25 PFLU_RS18945 LysR family transcriptional regulator insig. 30 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18945 LysR family transcriptional regulator insig. 30 91
  Shewanella oneidensis MR-1 SO4020 transcriptional regulator, LysR family (NCBI ptt file) insig. 30 93
  Pseudomonas simiae WCS417 PS417_16995 LysR family transcriptional regulator insig. 30 91
  Pseudomonas sp. BP01 JOY50_RS02620 LysR family transcriptional regulator insig. 34 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1236 Transcriptional regulator, LysR family insig. 33 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3992 Transcriptional regulator, LysR family insig. 30 91
o Rhizobium sp. OAE497 ABIE40_RS06590 LysR family transcriptional regulator insig. 30 94
  Pseudomonas segetis P6 ACVTMO_RS11815 LysR family transcriptional regulator insig. 29 92
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02815 Nodulation protein D 2 cofit 33 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4544 Transcriptional regulator, LysR family insig. 32 95
o Azospirillum sp. SherDot2 MPMX19_03531 PCP degradation transcriptional activation protein insig. 31 91
o Pseudomonas sp. DMC3 GFF2774 PCP degradation transcriptional activation protein insig. 31 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2596 Transcriptional regulator, LysR family insig. 30 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03707 PCP degradation transcriptional activation protein cofit 30 91
o Rahnella sp. WP5 EX31_RS00910 LysR family transcriptional regulator insig. 29 91
  Pseudomonas fluorescens FW300-N2E3 AO353_20375 LysR family transcriptional regulator insig. 30 91
  Pseudomonas aeruginosa PA14 IKLFDK_12545 LysR family transcriptional regulator sig. 31 92
  Pseudomonas orientalis W4I3 QF045_RS18675 LysR family transcriptional regulator cofit 30 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_18300 LysR family transcriptional regulator insig. 30 92
  Pseudomonas aeruginosa MRSN321 DY961_RS04870 LysR family transcriptional regulator insig. 31 92
  Pseudomonas aeruginosa PUPa3 DQ20_RS35770 LysR family transcriptional regulator insig. 31 92
  Pseudomonas fluorescens FW300-N2C3 AO356_01560 LysR family transcriptional regulator insig. 30 91
  Pseudomonas sp. RS175 PFR28_01264 PCP degradation transcriptional activation protein sig. 30 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2187 Transcriptional regulator, LysR family insig. 30 91
  Acidovorax sp. GW101-3H11 Ac3H11_4841 FIG000557: hypothetical protein co-occurring with RecR sig. 29 90
  Herbaspirillum seropedicae SmR1 HSERO_RS24025 LysR family transcriptional regulator no data 29 92
  Pseudomonas orientalis W4I3 QF045_RS09695 LysR family transcriptional regulator insig. 32 93
  Pseudomonas stutzeri RCH2 Psest_3970 Transcriptional regulator sig. 32 91
o Castellaniella sp019104865 MT123 ABCV34_RS12175 LysR family transcriptional regulator insig. 32 91
  Pseudomonas sp. DMC3 GFF1478 PCP degradation transcriptional activation protein insig. 29 91
  Azospirillum sp. SherDot2 MPMX19_05428 PCP degradation transcriptional activation protein insig. 32 91
  Rhizobium sp. OAE497 ABIE40_RS05450 LysR family transcriptional regulator insig. 31 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF204 Transcriptional regulator, LysR family insig. 28 94
  Alteromonas macleodii MIT1002 MIT1002_01758 HTH-type transcriptional regulator LeuO insig. 31 92
o Sinorhizobium meliloti 1021 SMc02893 transcriptional regulator insig. 32 91
  Bosea sp. OAE506 ABIE41_RS06780 LysR family transcriptional regulator insig. 30 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5483 LysR-family transcriptional regulator insig. 30 92
  Pseudomonas segetis P6 ACVTMO_RS21820 LysR family transcriptional regulator insig. 33 90
  Pseudomonas fluorescens FW300-N2E3 AO353_28485 LysR family transcriptional regulator insig. 32 90
  Kangiella aquimarina DSM 16071 B158DRAFT_1234 Transcriptional regulator insig. 31 94
  Enterobacter asburiae PDN3 EX28DRAFT_1151 Transcriptional regulator insig. 30 92
  Pseudomonas syringae pv. syringae B728a Psyr_2473 transcriptional regulator, LysR family insig. 29 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2473 transcriptional regulator, LysR family insig. 29 92
  Pseudomonas fluorescens SBW25 PFLU_RS13510 LysR family transcriptional regulator insig. 32 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13510 LysR family transcriptional regulator insig. 32 90
o Pseudomonas sp. S08-1 OH686_17940 Transcriptional regulator, LysR family insig. 33 91
  Sphingobium sp. HT1-2 GFF3041 Transcriptional Regulator, LysR family insig. 32 89
  Pseudomonas sp. RS175 PFR28_02125 Nodulation protein D 2 sig. 32 90
  Herbaspirillum seropedicae SmR1 HSERO_RS05020 transcriptional regulator insig. 30 92
  Serratia liquefaciens MT49 IAI46_24225 LysR family transcriptional regulator insig. 33 93
  Pseudomonas sp. S08-1 OH686_00880 Transcriptional regulator, LysR family insig. 30 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS14695 LysR family transcriptional regulator insig. 32 91
  Pseudomonas fluorescens SBW25 PFLU_RS07005 LysR family transcriptional regulator insig. 31 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07005 LysR family transcriptional regulator insig. 31 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1968 FIG000557: hypothetical protein co-occurring with RecR cofit 30 91
  Sphingobium sp. HT1-2 GFF4846 Transcriptional regulator, LysR family cofit 31 91
  Pseudomonas fluorescens FW300-N2C3 AO356_27040 LysR family transcriptional regulator insig. 34 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4233 Transcriptional regulator, LysR family no data 32 91
o Ralstonia solanacearum PSI07 RPSI07_RS14540 LysR family transcriptional regulator insig. 33 93
  Rhodopseudomonas palustris CGA009 TX73_009285 LysR family transcriptional regulator insig. 31 94
o Agrobacterium fabrum C58 Atu5197 LysR family transcriptional regulator insig. 30 91