Homologs of CA265_RS07905 from Pedobacter sp. GW460-11-11-14-LB5

antitermination protein NusG
SEED: Transcriptional activator RfaH

96 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07905 antitermination protein NusG insig. 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08980 UpxY family transcription antiterminator insig. 50 91
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4415 Transcription antiterminator strong 39 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14250 UpxY family transcription antiterminator insig. 32 88
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00925 UpxY family transcription antiterminator strong 32 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01815 antitermination protein NusG cofit 34 75
  Bacteroides thetaiotaomicron VPI-5482 BT0376 putative transcriptional regulator (NCBI ptt file) insig. 31 83
  Bacteroides thetaiotaomicron VPI-5482 BT1725 putative transcriptional regulator (NCBI ptt file) no data 29 85
  Bacteroides ovatus ATCC 8483 BACOVA_00196 transcription termination/antitermination factor NusG sig. 29 85
  Bacteroides thetaiotaomicron VPI-5482 BT1358 putative transcriptional regulator (NCBI ptt file) strong 31 85
  Bacteroides ovatus ATCC 8483 BACOVA_03690 transcription termination/antitermination factor NusG strong 29 84
  Bacteroides ovatus ATCC 8483 BACOVA_01723 transcription termination/antitermination factor NusG insig. 29 88
  Bacteroides ovatus ATCC 8483 BACOVA_05504 transcription termination/antitermination factor NusG insig. 29 85
  Bacteroides thetaiotaomicron VPI-5482 BT0596 putative transcriptional regulator (NCBI ptt file) insig. 29 85
  Bacteroides thetaiotaomicron VPI-5482 BT1656 putative transcriptional regulator (NCBI ptt file) sig. 28 85
  Bacteroides ovatus ATCC 8483 BACOVA_03746 transcription termination/antitermination factor NusG insig. 26 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17370 UpxY family transcription antiterminator sig. 29 82
  Bacteroides ovatus ATCC 8483 BACOVA_02457 transcription termination/antitermination factor NusG insig. 26 84
  Phocaeicola dorei CL03T12C01 ABI39_RS13390 UpxY family transcription antiterminator insig. 29 82
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5950 Transcriptional activator RfaH no data 25 88
  Pseudomonas stutzeri RCH2 Psest_2605 transcriptional activator RfaH sig. 29 79
  Bacteroides stercoris CC31F HMPREF1181_RS03935 UpxY family transcription antiterminator cofit 28 93
  Kangiella aquimarina DSM 16071 B158DRAFT_2343 transcriptional activator RfaH strong 31 71
  Pseudomonas syringae pv. syringae B728a Psyr_3226 Transcriptional activator RfaH insig. 33 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3226 Transcriptional activator RfaH insig. 33 63
  Bacteroides ovatus ATCC 8483 BACOVA_00023 transcription termination/antitermination factor NusG no data 28 69
  Bacteroides thetaiotaomicron VPI-5482 BT2886 putative transcriptional regulator (NCBI ptt file) sig. 28 86
  Agrobacterium fabrum C58 Atu0450 transcription antitermination protein strong 30 74
  Shewanella sp. ANA-3 Shewana3_1374 transcription antitermination protein nusG (RefSeq) strong 25 71
  Escherichia fergusonii Becca EFB2_04775 Transcription antitermination protein RfaH strong 27 68
  Escherichia coli Nissle 1917 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH strong 27 68
  Escherichia coli BL21 ECD_03733 transcription antitermination protein strong 27 68
  Escherichia coli ECOR27 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH strong 27 68
  Escherichia coli ECOR38 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH strong 27 68
  Escherichia coli ECRC101 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH insig. 27 68
  Escherichia coli ECRC101 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH sig. 27 68
  Escherichia coli ECRC102 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH strong 27 68
  Escherichia coli ECRC62 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH strong 27 68
  Escherichia coli ECRC98 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH no data 27 68
  Escherichia coli ECRC99 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH no data 27 68
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04211 Transcription antitermination protein RfaH cofit 27 68
  Escherichia coli BW25113 b3842 rfaH transcriptional activator RfaH (NCBI) strong 27 68
  Shewanella oneidensis MR-1 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) strong 24 71
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF267 Transcriptional activator RfaH strong 28 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5081 Transcriptional activator RfaH no data 25 88
  Fusobacterium nucleatum SB010 HUW76_10380 transcription termination/antitermination factor NusG cofit 27 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_05050 transcription/translation regulatory transformer protein RfaH insig. 26 75
  Marinobacter adhaerens HP15 HP15_2404 transcriptional activator RfaH strong 31 62
  Bacteroides stercoris CC31F HMPREF1181_RS04120 UpxY family transcription antiterminator strong 34 51
o Magnetospirillum magneticum AMB-1 AMB_RS00245 transcriptional activator RfaH insig. 27 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13090 UpxY family transcription antiterminator insig. 26 85
  Herbaspirillum seropedicae SmR1 HSERO_RS02425 transcriptional activator strong 23 77
  Pseudomonas fluorescens SBW25 PFLU_RS27225 transcription termination/antitermination protein NusG no data 30 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27225 transcription termination/antitermination protein NusG no data 30 75
  Pseudomonas syringae pv. syringae B728a Psyr_4560 transcription antitermination protein nusG no data 30 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4560 transcription antitermination protein nusG no data 30 75
  Pseudomonas simiae WCS417 PS417_25595 antitermination protein NusG no data 30 75
  Ralstonia sp. UNC404CL21Col ABZR87_RS02950 transcription termination/antitermination protein NusG no data 28 76
  Pseudomonas fluorescens FW300-N2E3 AO353_07060 antitermination protein NusG no data 30 74
  Pseudomonas fluorescens FW300-N2C3 AO356_14585 antitermination protein NusG no data 30 74
  Serratia liquefaciens MT49 IAI46_01105 transcription/translation regulatory transformer protein RfaH insig. 27 69
  Enterobacter sp. TBS_079 MPMX20_04440 Transcription antitermination protein RfaH strong 26 68
  Klebsiella michiganensis M5al BWI76_RS01340 transcription/translation regulatory transformer protein RfaH no data 23 75
  Enterobacter asburiae PDN3 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH cofit 26 68
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06545 transcriptional regulator strong 27 66
  Shewanella loihica PV-4 Shew_1398 NusG antitermination factor (RefSeq) strong 27 71
  Phocaeicola dorei CL03T12C01 ABI39_RS17595 UpxY family transcription antiterminator insig. 25 85
  Erwinia tracheiphila SCR3 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH strong 25 69
  Pseudomonas putida KT2440 PP_0442 transcription antipausing factor NusG no data 29 75
  Dickeya dadantii 3937 DDA3937_RS20290 transcription/translation regulatory transformer protein RfaH strong 27 68
  Rahnella sp. WP5 EX31_RS14590 transcription/translation regulatory transformer protein RfaH insig. 25 75
  Pseudomonas stutzeri RCH2 Psest_3619 transcription termination/antitermination factor NusG no data 28 75
  Pantoea sp. MT58 IAI47_18250 transcription/translation regulatory transformer protein RfaH strong 26 69
  Azospirillum brasilense Sp245 AZOBR_RS11535 transcription termination/antitermination factor NusG no data 26 75
  Phocaeicola dorei CL03T12C01 ABI39_RS20340 hypothetical protein cofit 25 66
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03580 UpxY family transcription antiterminator sig. 24 85
  Desulfovibrio vulgaris Miyazaki F DvMF_1450 NusG antitermination factor (RefSeq) no data 25 74
  Azospirillum sp. SherDot2 MPMX19_00380 Transcription termination/antitermination protein NusG no data 27 75
  Dickeya dianthicola 67-19 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH strong 26 68
  Dickeya dianthicola ME23 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH cofit 26 68
  Rhodospirillum rubrum S1H Rru_A2700 NusG antitermination factor (NCBI) no data 26 71
  Caulobacter crescentus NA1000 CCNA_03310 transcription antitermination protein NusG no data 29 71
  Caulobacter crescentus NA1000 Δfur CCNA_03310 transcription antitermination protein NusG no data 29 71
  Rhodopseudomonas palustris CGA009 TX73_016925 transcription termination/antitermination protein NusG no data 26 73
  Marinobacter adhaerens HP15 HP15_p187g93 transcriptional activator RfaH insig. 26 79
  Castellaniella sp019104865 MT123 ABCV34_RS12845 transcription termination/antitermination NusG family protein insig. 21 69
  Shewanella amazonensis SB2B Sama_2265 transcriptional activator rfaH, putative (RefSeq) strong 26 79
  Sinorhizobium meliloti 1021 SMc01322 transcription antitermination protein NusG no data 27 73
  Bifidobacterium breve UCC2003 BBR_RS19420 transcription termination/antitermination factor NusG no data 24 74
  Acidovorax sp. GW101-3H11 Ac3H11_4453 Transcription antitermination protein NusG no data 24 73
  Pectobacterium carotovorum WPP14 HER17_RS20570 transcription/translation regulatory transformer protein RfaH strong 22 75
  Bacteroides stercoris CC31F HMPREF1181_RS11925 hypothetical protein insig. 30 33
  Bacteroides stercoris CC31F HMPREF1181_RS11940 hypothetical protein insig. 26 40
  Dinoroseobacter shibae DFL-12 Dshi_0259 NusG antitermination factor (RefSeq) no data 22 75
  Rhizobium sp. OAE497 ABIE40_RS07770 transcription termination/antitermination protein NusG no data 26 73
  Dechlorosoma suillum PS Dsui_0371 transcription termination/antitermination factor NusG no data 25 73