Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 100 | 100 |
| Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 59 | 99 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3917 | | two component transcriptional regulator, LuxR family | insig. | 57 | 98 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2397.1 | | two-component system regulatory protein | insig. | 61 | 97 |
| Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 54 | 99 |
| Lysobacter sp. OAE881 | ABIE51_RS02650 | | response regulator transcription factor | insig. | 47 | 98 |
| Pseudomonas simiae WCS417 | PS417_10720 | | chemotaxis protein CheY | strong | 38 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 38 | 97 |
| Pseudomonas stutzeri RCH2 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 37 | 97 |
| Pseudomonas fluorescens SBW25 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 97 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 36 | 97 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 36 | 97 |
o | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 37 | 96 |
| Pseudomonas sp. RS175 | PFR28_01410 | | Response regulator GacA | strong | 37 | 97 |
| Pseudomonas sp. S08-1 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | strong | 35 | 97 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14195 | | response regulator transcription factor | no data | 39 | 97 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14480 | | response regulator transcription factor | strong | 39 | 97 |
| Lysobacter sp. OAE881 | ABIE51_RS14590 | | response regulator transcription factor | sig. | 39 | 94 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03330 | citB | DNA-binding response regulator | cofit | 39 | 97 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 38 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 36 | 97 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21335 | | response regulator transcription factor | sig. | 39 | 97 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3859.1 | | Two-component system regulatory protein | sig. | 39 | 92 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 34 | 90 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 36 | 98 |
| Variovorax sp. OAS795 | ABID97_RS28185 | | response regulator transcription factor | insig. | 37 | 96 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 36 | 99 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 34 | 97 |
| Pseudomonas putida KT2440 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | strong | 37 | 97 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 35 | 97 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 36 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 36 | 96 |
o | Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 38 | 96 |
| Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 36 | 97 |
| Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 35 | 97 |
o | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 34 | 98 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 35 | 97 |
| Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 35 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08905 | | XRE family transcriptional regulator | insig. | 37 | 96 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 35 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS09115 | | nitrate/nitrite response regulator protein NarP | insig. | 39 | 93 |
| Serratia liquefaciens MT49 | IAI46_18680 | | two-component system response regulator NarL | insig. | 40 | 93 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 35 | 97 |
| Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 97 |
| Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 35 | 96 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_17560 | | DNA-binding response regulator | insig. | 38 | 96 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 37 | 97 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 38 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 37 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 37 | 97 |
| Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 97 |
| Variovorax sp. OAS795 | ABID97_RS12700 | | response regulator transcription factor | insig. | 37 | 98 |
| Marinobacter adhaerens HP15 | HP15_1567 | | two component transcriptional regulator, LuxR family | strong | 35 | 97 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 33 | 100 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 33 | 100 |
| Shewanella loihica PV-4 | Shew_0842 | | two component LuxR family transcriptional regulator (RefSeq) | sig. | 37 | 90 |
| Mycobacterium tuberculosis H37Rv | Rv0844c | | Possible nitrate/nitrite response transcriptional regulatory protein NarL | insig. | 37 | 98 |
| Shewanella oneidensis MR-1 | SO3982 | narP | DNA-binding nitrate/nitrite response regulator (NCBI ptt file) | sig. | 37 | 94 |
| Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 33 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 33 | 97 |
| Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 33 | 97 |
| Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 36 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 36 | 97 |
| Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 35 | 97 |
| Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 35 | 99 |
o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21285 | | DNA-binding response regulator | insig. | 35 | 97 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 35 | 97 |
| Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 33 | 97 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4961.1 | | Two-component system regulatory protein | insig. | 38 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 33 | 97 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 32 | 99 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 32 | 99 |
| Pantoea sp. MT58 | IAI47_05315 | | response regulator | sig. | 38 | 96 |
| Lysobacter sp. OAE881 | ABIE51_RS11810 | | response regulator | insig. | 35 | 98 |
| Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 34 | 97 |
| Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 34 | 97 |
| Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 34 | 97 |
| Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 34 | 97 |
| Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 34 | 97 |
| Escherichia coli ECRC101 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | insig. | 34 | 97 |
| Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 34 | 97 |
| Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | no data | 34 | 97 |
| Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | no data | 34 | 97 |
| Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 34 | 97 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 34 | 97 |
| Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 34 | 97 |
| Shewanella sp. ANA-3 | Shewana3_0656 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 37 | 94 |
| Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 34 | 98 |
| Variovorax sp. OAS795 | ABID97_RS07360 | | response regulator transcription factor | strong | 33 | 97 |
| Variovorax sp. SCN45 | GFF2564 | | Two-component transcriptional response regulator, LuxR family | cofit | 33 | 97 |
| Pseudomonas sp. RS175 | PFR28_01868 | | Transcriptional regulatory protein DegU | no data | 33 | 97 |
o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16950 | | response regulator transcription factor | insig. | 32 | 100 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | no data | 34 | 97 |
| Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 36 | 96 |
| Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 34 | 97 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | cofit | 34 | 97 |
| Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 33 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30910 | | response regulator transcription factor | insig. | 37 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 36 | 96 |