Homologs of Shewana3_0488 from Shewanella sp. ANA-3

cytochrome c-type biogenesis protein CcmF (RefSeq)
SEED: Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly
KEGG: cytochrome c-type biogenesis protein CcmF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_0488 cytochrome c-type biogenesis protein CcmF (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO0478 ccmF-2 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) insig. 74 99
o Shewanella loihica PV-4 Shew_0347 cytochrome c assembly protein (RefSeq) insig. 51 92
  Shewanella sp. ANA-3 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 48 97
  Shewanella oneidensis MR-1 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) strong 47 97
  Shewanella loihica PV-4 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 46 97
  Shewanella amazonensis SB2B Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 46 96
  Kangiella aquimarina DSM 16071 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF strong 41 99
  Pseudomonas segetis P6 ACVTMO_RS15395 heme lyase CcmF/NrfE family subunit no data 42 100
  Alteromonas macleodii MIT1002 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF no data 42 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_10265 c-type cytochrome biogenesis protein CcmF strong 42 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF no data 43 93
  Pseudomonas orientalis W4I3 QF045_RS11430 heme lyase CcmF/NrfE family subunit no data 43 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF no data 43 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3644 Cytochrome c heme lyase subunit CcmF no data 43 93
  Pseudomonas sp. RS175 PFR28_00870 Cytochrome c-type biogenesis protein CcmF no data 43 93
  Escherichia coli ECOR38 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 41 98
  Pseudomonas simiae WCS417 PS417_08715 cytochrome C biogenesis protein CcmF no data 42 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF sig. 41 98
  Pseudomonas sp. DMC3 GFF2490 Cytochrome c-type biogenesis protein CcmF no data 43 93
  Pseudomonas fluorescens FW300-N2C3 AO356_03635 cytochrome C biogenesis protein CcmF no data 42 98
  Pseudomonas fluorescens FW300-N2E3 AO353_18875 cytochrome C biogenesis protein CcmF no data 44 93
  Escherichia coli BL21 ECD_02123 heme lyase, CcmF subunit sig. 41 98
  Escherichia fergusonii Becca EFB2_01660 Cytochrome c-type biogenesis protein CcmF insig. 41 98
  Escherichia coli Nissle 1917 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF no data 41 98
  Escherichia coli BW25113 b2196 ccmF heme lyase, CcmF subunit (NCBI) insig. 41 98
  Pseudomonas syringae pv. syringae B728a Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 42 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 42 100
  Escherichia coli ECOR27 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 41 98
  Pseudomonas fluorescens SBW25 PFLU_RS08670 heme lyase CcmF/NrfE family subunit cofit 42 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08670 heme lyase CcmF/NrfE family subunit strong 42 99
  Escherichia coli ECRC100 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 41 98
  Escherichia coli ECRC101 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 41 98
  Escherichia coli ECRC102 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 41 98
  Escherichia coli ECRC62 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF cofit 41 98
  Escherichia coli ECRC98 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 41 98
  Escherichia coli ECRC99 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF no data 41 98
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01875 Cytochrome c-type biogenesis protein CcmF no data 42 93
  Pseudomonas stutzeri RCH2 Psest_1759 c-type cytochrome biogenesis protein CcmF no data 43 96
  Pseudomonas sp. S08-1 OH686_02635 cytochrome c-type biogenesis protein CcmF no data 43 99
  Dechlorosoma suillum PS Dsui_1172 c-type cytochrome biogenesis protein CcmF no data 41 95
  Serratia liquefaciens MT49 IAI46_18085 heme lyase CcmF/NrfE family subunit insig. 40 95
  Rahnella sp. WP5 EX31_RS19745 heme lyase CcmF/NrfE family subunit insig. 39 95
  Pantoea sp. MT58 IAI47_06090 heme lyase CcmF/NrfE family subunit cofit 40 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4877 Cytochrome c heme lyase subunit CcmF no data 40 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00045 heme lyase CcmF/NrfE family subunit insig. 40 95
  Pectobacterium carotovorum WPP14 HER17_RS09055 heme lyase CcmF/NrfE family subunit insig. 39 95
  Klebsiella pneumoniae MKP103 KDGMDA_23845 cytochrome c maturation protein CcmE insig. 40 95
  Pseudomonas sp. SVBP6 COO64_RS25715 heme lyase CcmF/NrfE family subunit no data 41 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit no data 42 89
  Marinobacter adhaerens HP15 HP15_2281 cytochrome c assembly protein no data 41 94
  Erwinia amylovora T8 OLJFJH_11100 heme lyase NrfEFG subunit NrfE insig. 38 95
  Pseudomonas sp. BP01 JOY50_RS00480 heme lyase CcmF/NrfE family subunit no data 41 94
  Pseudomonas aeruginosa MRSN321 DY961_RS05510 heme lyase CcmF/NrfE family subunit no data 43 94
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF insig. 40 98
  Pseudomonas aeruginosa PA14 IKLFDK_07040 Cytochrome c-type biogenesis protein CcmF no data 43 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS47280 heme lyase CcmF/NrfE family subunit no data 43 94
  Pseudomonas putida KT2440 PP_4322 holocytochrome c synthetase no data 40 94
  Lysobacter sp. OAE881 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit strong 40 99
  Rhodanobacter denitrificans MT42 LRK55_RS15815 heme lyase CcmF/NrfE family subunit insig. 39 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16065 heme lyase CcmF/NrfE family subunit no data 39 94
  Dinoroseobacter shibae DFL-12 Dshi_3411 cytochrome c-type biogenesis protein CcmF (RefSeq) sig. 38 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2342.1 Cytochrome c heme lyase subunit CcmF no data 43 91
  Magnetospirillum magneticum AMB-1 AMB_RS21250 heme lyase CcmF/NrfE family subunit no data 38 97
  Rhizobium sp. OAE497 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit strong 38 95
  Azospirillum brasilense Sp245 AZOBR_RS00740 heme lyase subunit CcmF no data 36 95
  Rhodanobacter sp. FW510-T8 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF no data 39 87
  Azospirillum sp. SherDot2 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF no data 38 94
  Rhodospirillum rubrum S1H Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) no data 37 98
  Dinoroseobacter shibae DFL-12 Dshi_3775 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 36 95
  Dinoroseobacter shibae DFL-12 Dshi_4051 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 36 95
  Rhodopseudomonas palustris CGA009 TX73_009900 heme lyase CcmF/NrfE family subunit no data 38 87
  Agrobacterium fabrum C58 Atu0975 cytochrome c-type synthesis protein no data 36 98
  Xanthobacter sp. DMC5 GFF1779 Cytochrome c-type biogenesis protein CcmF no data 38 95
  Sinorhizobium meliloti 1021 SMc02363 cytochrome C-type biogenesis transmembrane protein sig. 36 98
  Bosea sp. OAE506 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit no data 37 95
  Phaeobacter inhibens DSM 17395 PGA1_c17010 cytochrome c-type biogenesis protein CcmF no data 37 94
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12730 heme lyase CcmF/NrfE family subunit no data 39 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10825 heme lyase CcmF/NrfE family subunit no data 38 87
  Pectobacterium carotovorum WPP14 HER17_RS09015 heme lyase CcmF/NrfE family subunit cofit 37 95
  Sphingobium sp. HT1-2 GFF83 Cytochrome c heme lyase subunit CcmF no data 39 88
  Caulobacter crescentus NA1000 CCNA_02848 heme chaperone-apocytochrome heme-lyase strong 34 95
  Caulobacter crescentus NA1000 Δfur CCNA_02848 heme chaperone-apocytochrome heme-lyase cofit 34 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0172 Cytochrome c biogenesis factor strong 38 85
  Escherichia fergusonii Becca EFB2_04515 Cytochrome c-type biogenesis protein CcmF insig. 47 54
  Escherichia coli Nissle 1917 ECOLIN_RS23575 heme lyase CcmF/NrfE family subunit insig. 47 54
  Escherichia coli ECOR27 NOLOHH_05050 nrfF heme lyase NrfEFG subunit NrfF insig. 47 54
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03966 Cytochrome c-type biogenesis protein CcmF insig. 47 54
  Escherichia coli ECRC62 BNILDI_06475 ccmF Cytochrome c biogenesis protein CcmF insig. 47 54
  Escherichia coli BW25113 b4074 nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE (NCBI) insig. 47 54
  Escherichia coli ECRC100 OKFHMN_12800 nrfF heme lyase NrfEFG subunit NrfF cofit 47 54
  Escherichia coli ECRC101 MCAODC_03310 nrfF heme lyase NrfEFG subunit NrfF insig. 47 54
  Escherichia coli ECRC102 NIAGMN_10645 nrfF heme lyase NrfEFG subunit NrfF insig. 47 54
  Escherichia coli ECRC98 JDDGAC_16435 nrfF heme lyase NrfEFG subunit NrfF insig. 47 54
  Escherichia coli ECRC99 KEDOAH_15350 nrfF heme lyase NrfEFG subunit NrfF no data 47 54
  Escherichia coli BL21 ECD_03946 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE insig. 47 54
  Escherichia coli ECOR38 HEPCGN_11425 ccmF Cytochrome c biogenesis protein CcmF insig. 47 54
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1457 Cytochrome c heme lyase subunit CcmF insig. 40 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) no data 29 94
  Desulfovibrio vulgaris Miyazaki F DvMF_3132 cytochrome c assembly protein (RefSeq) no data 30 88