Homologs of Shew_2529 from Shewanella loihica PV-4

pseudouridine synthase (RefSeq)
SEED: Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2529 pseudouridine synthase (RefSeq) insig. 100 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_14535 RluA family pseudouridine synthase insig. 54 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03255 pseudouridine synthase insig. 51 96
o Bacteroides ovatus ATCC 8483 BACOVA_05306 pseudouridine synthase, RluA family insig. 46 96
o Phocaeicola dorei CL03T12C01 ABI39_RS18705 RluA family pseudouridine synthase insig. 45 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14830 RluA family pseudouridine synthase insig. 47 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 45 96
o Bacteroides thetaiotaomicron VPI-5482 BT4501 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) insig. 45 96
o Bacteroides stercoris CC31F HMPREF1181_RS13725 RNA pseudouridine synthase insig. 47 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 34 86
  Rahnella sp. WP5 EX31_RS03750 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 50 37
  Dickeya dianthicola ME23 DZA65_RS19315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 48 37
  Dickeya dianthicola 67-19 HGI48_RS18175 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 47 37
  Dickeya dadantii 3937 DDA3937_RS18240 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 47 37
  Pectobacterium carotovorum WPP14 HER17_RS02985 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 48 37
  Serratia liquefaciens MT49 IAI46_03270 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 47 37
  Pantoea sp. MT58 IAI47_16060 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 46 37
  Enterobacter sp. TBS_079 MPMX20_00752 Dual-specificity RNA pseudouridine synthase RluA insig. 45 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_12700 RNA pseudouridine synthase insig. 46 34
  Klebsiella michiganensis M5al BWI76_RS04565 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA sig. 45 37
  Alteromonas macleodii MIT1002 MIT1002_00658 Ribosomal large subunit pseudouridine synthase A insig. 43 37
  Escherichia coli BL21 ECD_00060 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent cofit 45 37
  Escherichia coli ECOR27 NOLOHH_03150 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 45 37
  Escherichia coli ECOR38 HEPCGN_08795 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 45 37
  Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 45 37
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 45 37
  Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 45 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF184 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) cofit 45 37
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 46 37
  Enterobacter asburiae PDN3 EX28DRAFT_3650 pseudouridine synthase, RluA family insig. 45 37
  Escherichia fergusonii Becca EFB2_03987 Dual-specificity RNA pseudouridine synthase RluA insig. 44 37
  Escherichia coli Nissle 1917 ECOLIN_RS00310 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 44 37
  Erwinia tracheiphila SCR3 LU632_RS02800 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 45 37
  Shewanella sp. ANA-3 Shewana3_0799 ribosomal large subunit pseudouridine synthase A (RefSeq) insig. 44 37
  Escherichia coli ECRC100 OKFHMN_10805 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 44 37
  Escherichia coli ECRC101 MCAODC_01320 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 44 37
  Escherichia coli ECRC102 NIAGMN_08655 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 44 37
  Escherichia coli ECRC98 JDDGAC_14400 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 44 37
  Escherichia coli ECRC99 KEDOAH_17350 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 44 37
  Erwinia amylovora T8 OLJFJH_01345 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 45 37
  Shewanella amazonensis SB2B Sama_0606 pseudouridylate synthase (RefSeq) sig. 45 37
  Agrobacterium fabrum C58 Atu4041 ribosomal large subunit pseudouridine synthase A sig. 43 37
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 46 35
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 44 35
  Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 45 35
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 44 34
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 45 34
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 42 35
  Pseudomonas aeruginosa PA14 IKLFDK_16600 RNA pseudouridine synthase insig. 43 35
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 43 35
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 42 35
  Acinetobacter radioresistens SK82 MPMX26_02477 Dual-specificity RNA pseudouridine synthase RluA insig. 41 37
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 43 35
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 43 35
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 43 35
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 41 35
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 42 35
  Enterobacter asburiae PDN3 EX28DRAFT_1359 Pseudouridylate synthases, 23S RNA-specific insig. 44 35
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 43 35
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 43 35
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3753 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) sig. 42 35
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 42 35
  Pseudomonas stutzeri RCH2 Psest_2948 pseudouridine synthase, RluA family sig. 42 35
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 42 35
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 41 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 41 35
  Erwinia amylovora T8 OLJFJH_10525 RNA pseudouridine synthase insig. 43 35
  Pantoea sp. MT58 IAI47_07280 RluA family pseudouridine synthase insig. 42 35
  Rahnella sp. WP5 EX31_RS17740 RluA family pseudouridine synthase insig. 44 35
  Klebsiella michiganensis M5al BWI76_RS17615 RNA pseudouridine synthase insig. 43 35
  Kangiella aquimarina DSM 16071 B158DRAFT_1514 Pseudouridylate synthases, 23S RNA-specific insig. 43 34
  Serratia liquefaciens MT49 IAI46_20985 RluA family pseudouridine synthase insig. 42 35
  Pseudomonas sp. DMC3 GFF2599 Dual-specificity RNA pseudouridine synthase RluA insig. 42 34
  Enterobacter sp. TBS_079 MPMX20_02187 Dual-specificity RNA pseudouridine synthase RluA insig. 42 35
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3559 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 41 35
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03745 pseudouridylate synthase insig. 53 23
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 41 34
  Acinetobacter radioresistens SK82 MPMX26_01026 Dual-specificity RNA pseudouridine synthase RluA cofit 39 35
  Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 40 37
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03745 pseudouridylate synthase insig. 51 20
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 40 35
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 38 35
  Variovorax sp. SCN45 GFF7036 LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) insig. 41 35
  Cupriavidus basilensis FW507-4G11 RR42_RS14155 pseudouridine synthase strong 38 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 39 37
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 38 35
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 37 35
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 37 35
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 35 38
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 36 35
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 37 33
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 36 35
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 36 38
  Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 36 36
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 38 36
  Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 36 35
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 34 35
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 36 35
  Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 35 35
  Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 35 34