Homologs of Shew_1976 from Shewanella loihica PV-4

putative ATP-dependent protease La-relatedprotein (RefSeq)
SEED: ATP-dependent protease La (EC 3.4.21.53) Type II

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1976 putative ATP-dependent protease La-relatedprotein (RefSeq) strong 100 100
o Shewanella sp. ANA-3 Shewana3_1160 ATP-dependent protease, putative (RefSeq) insig. 69 98
o Shewanella oneidensis MR-1 SO3391 ATP-dependent protease, putative (NCBI ptt file) sig. 67 98
o Shewanella amazonensis SB2B Sama_2406 ATP-dependent protease, putative (RefSeq) strong 66 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_18990 ATP-dependent protease cofit 65 99
o Marinobacter adhaerens HP15 HP15_1052 peptidase S16, lon domain-containing protein strong 54 98
o Acinetobacter radioresistens SK82 MPMX26_01059 Lon protease sig. 40 94
o Magnetospirillum magneticum AMB-1 AMB_RS02920 ATP-dependent protease cofit 40 98
o Dechlorosoma suillum PS Dsui_2223 putative ATP-dependent protease insig. 38 96
  Marinobacter adhaerens HP15 HP15_1352 peptidase S16, lon domain protein insig. 36 99
o Pseudomonas syringae pv. syringae B728a Psyr_4259 ATP-dependent protease, putative insig. 37 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4259 ATP-dependent protease, putative insig. 37 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1459 ATP-dependent protease La (EC 3.4.21.53) Type II insig. 36 96
o Pseudomonas stutzeri RCH2 Psest_3396 Predicted ATP-dependent protease sig. 37 98
o Pseudomonas aeruginosa PA14 IKLFDK_00640 ATP-dependent protease cofit 36 96
o Pseudomonas fluorescens FW300-N2E3 AO353_14055 ATP-dependent protease sig. 36 97
o Pseudomonas sp. RS175 PFR28_03779 hypothetical protein strong 37 96
o Pseudomonas sp. SVBP6 COO64_RS03035 Lon protease family protein insig. 37 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5093 ATP-dependent protease La (EC 3.4.21.53) Type II sig. 37 97
o Pseudomonas fluorescens FW300-N2C3 AO356_15765 ATP-dependent protease insig. 37 97
o Pseudomonas sp. DMC3 GFF3971 hypothetical protein cofit 37 96
o Pseudomonas fluorescens SBW25 PFLU_RS26150 ATP-binding protein strong 37 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26150 ATP-binding protein strong 37 96
o Pseudomonas simiae WCS417 PS417_24230 ATP-dependent protease strong 37 96
o Pseudomonas putida KT2440 PP_0680 ATP-dependent protease-like protein strong 37 93
o Desulfovibrio vulgaris Miyazaki F DvMF_0312 peptidase S16 lon domain protein (RefSeq) insig. 35 99
o Alteromonas macleodii MIT1002 MIT1002_01859 Lon protease insig. 36 94
o Pseudomonas sp. S08-1 OH686_16260 ATP-dependent protease La Type II insig. 37 93
o Pseudomonas sp. BP01 JOY50_RS24670 Lon protease family protein insig. 36 93
o Desulfovibrio vulgaris Hildenborough JW710 DVU1472 ATP-dependent protease, putative (TIGR) insig. 34 99
  Desulfovibrio vulgaris Miyazaki F DvMF_0590 ATP-dependent protease, putative (RefSeq) strong 32 95
  Desulfovibrio vulgaris Hildenborough JW710 DVU1893 ATP-dependent protease, putative (TIGR) sig. 33 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2787 ATP-dependent protease La (EC 3.4.21.53) Type II insig. 35 80
  Rhodospirillum rubrum S1H Rru_A3583 ATP-dependent protease-like (NCBI) insig. 42 61
o Acidovorax sp. GW101-3H11 Ac3H11_106 ATP-dependent protease La (EC 3.4.21.53) Type II insig. 30 91
  Shewanella sp. ANA-3 Shewana3_1607 ATP-dependent protease (RefSeq) strong 38 58
  Shewanella oneidensis MR-1 SO1857 hypothetical ATP-dependent protease (NCBI ptt file) strong 39 55
  Enterobacter sp. TBS_079 MPMX20_01605 Lon protease insig. 40 51
  Serratia liquefaciens MT49 IAI46_08865 Lon protease family protein sig. 37 55
  Enterobacter asburiae PDN3 EX28DRAFT_1988 Predicted ATP-dependent protease cofit 39 51
  Shewanella loihica PV-4 Shew_1818 ATP-dependent protease (RefSeq) no data 42 47
  Escherichia coli ECRC100 OKFHMN_05245 ycbZ Putative Lon protease-like protein cofit 35 66
  Escherichia coli ECRC101 MCAODC_24635 ycbZ Putative Lon protease-like protein insig. 35 66
  Escherichia coli ECRC102 NIAGMN_02965 ycbZ Putative Lon protease-like protein insig. 35 66
  Escherichia coli ECRC98 JDDGAC_08855 ycbZ Putative Lon protease-like protein cofit 35 66
  Escherichia coli ECRC99 KEDOAH_22490 ycbZ Putative Lon protease-like protein no data 35 66
  Escherichia coli BL21 ECD_00959 putative peptidase cofit 35 66
  Escherichia coli ECOR27 NOLOHH_21800 ycbZ Putative Lon protease-like protein insig. 35 66
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02711 Lon protease cofit 35 66
  Escherichia coli BW25113 b0955 ycbZ predicted peptidase (NCBI) strong 35 66
  Escherichia coli ECOR38 HEPCGN_23275 ycbZ Putative Lon protease-like protein insig. 39 51
  Escherichia coli ECRC62 BNILDI_19965 ycbZ Putative Lon protease-like protein cofit 35 66
  Methylophilus sp. DMC18 GFF1036 Lon protease insig. 30 75
  Escherichia coli Nissle 1917 ECOLIN_RS05015 Lon protease family protein sig. 38 51
  Escherichia fergusonii Becca EFB2_03116 Lon protease insig. 38 51
  Shewanella amazonensis SB2B Sama_1606 ATP-dependent protease (RefSeq) sig. 40 47
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3246 ATP-dependent protease La (EC 3.4.21.53) Type II cofit 37 54
  Klebsiella michiganensis M5al BWI76_RS09960 Lon protease strong 37 53
  Erwinia amylovora T8 OLJFJH_15945 Lon protease cofit 38 51
  Rahnella sp. WP5 EX31_RS18050 Lon protease family protein insig. 35 52
  Pectobacterium carotovorum WPP14 HER17_RS08410 Lon protease family protein cofit 36 53
  Erwinia tracheiphila SCR3 LU632_RS10000 Lon protease family protein cofit 35 54
  Pantoea sp. MT58 IAI47_12655 Lon protease family protein sig. 36 53
  Dickeya dadantii 3937 DDA3937_RS13250 Lon protease family protein cofit 33 57
  Dickeya dianthicola 67-19 HGI48_RS13315 Lon protease family protein cofit 34 55
  Dickeya dianthicola ME23 DZA65_RS13790 Lon protease family protein insig. 34 55
  Vibrio cholerae E7946 ATCC 55056 CSW01_07450 Lon protease family protein insig. 33 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2788 ATP-dependent protease La (EC 3.4.21.53) Type II no data 45 16
  Methanococcus maripaludis JJ MMJJ_RS08245 ATP-dependent protease LonB no data 39 11
  Methanococcus maripaludis S2 MMP_RS06110 ATP-dependent protease LonB strong 39 11
  Kangiella aquimarina DSM 16071 B158DRAFT_1038 ATP-dependent protease La cofit 33 15
  Magnetospirillum magneticum AMB-1 AMB_RS14035 endopeptidase La strong 24 34
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I no data 28 28
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07320 endopeptidase La strong 35 15
  Herbaspirillum seropedicae SmR1 HSERO_RS12905 peptidase no data 34 15
  Ralstonia solanacearum GMI1000 RS_RS08655 endopeptidase La no data 34 15
  Phaeobacter inhibens DSM 17395 PGA1_c20540 ATP-dependent protease La no data 29 19
  Azospirillum sp. SherDot2 MPMX19_01545 Lon protease insig. 29 21
  Pseudomonas fluorescens FW300-N2E3 AO353_20185 DNA-binding protein strong 29 25
  Rhodospirillum rubrum S1H Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) cofit 33 15
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01340 endopeptidase La no data 34 15
  Ralstonia solanacearum PSI07 RPSI07_RS16135 endopeptidase La no data 34 15
  Ralstonia solanacearum UW163 UW163_RS14650 endopeptidase La no data 34 15
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I strong 31 20
  Pseudomonas syringae pv. syringae B728a Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 strong 33 15
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 sig. 33 15
  Acinetobacter radioresistens SK82 MPMX26_02299 Lon protease strong 33 17
  Castellaniella sp019104865 MT123 ABCV34_RS05125 endopeptidase La no data 34 15
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I no data 27 35
  Pseudomonas fluorescens FW300-N2C3 AO356_01740 DNA-binding protein strong 27 35
  Pseudomonas aeruginosa PA14 IKLFDK_08760 endopeptidase La cofit 26 40
  Ralstonia sp. UNC404CL21Col ABZR87_RS12785 endopeptidase La strong 33 15
  Pseudomonas fluorescens SBW25 PFLU_RS19160 endopeptidase La strong 33 15
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19160 endopeptidase La strong 33 15
  Pseudomonas simiae WCS417 PS417_17225 DNA-binding protein no data 33 15
  Rhodospirillum rubrum S1H Rru_A3583 ATP-dependent protease-like (NCBI) insig. 28 29
  Desulfovibrio vulgaris Miyazaki F DvMF_0112 ATP-dependent protease La (RefSeq) strong 31 15
  Pseudomonas sp. DMC3 GFF1445 Lon protease cofit 33 15
  Pseudomonas sp. RS175 PFR28_01230 Lon protease strong 33 15
  Pseudomonas sp. SVBP6 COO64_RS19205 lon endopeptidase La cofit 32 15