Homologs of BT1054 from Bacteroides thetaiotaomicron VPI-5482

ATP-dependent helicase (NCBI ptt file)
SEED: Helicase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT1054 ATP-dependent helicase (NCBI ptt file) no data 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_04090 UvrD/REP helicase no data 92 100
o Bacteroides stercoris CC31F HMPREF1181_RS15235 UvrD-helicase domain-containing protein cofit 68 100
o Phocaeicola dorei CL03T12C01 ABI39_RS17615 UvrD-helicase domain-containing protein no data 69 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03535 UvrD-helicase domain-containing protein cofit 69 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04805 UvrD-helicase domain-containing protein strong 34 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4051 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) insig. 30 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18830 DNA helicase UvrD strong 29 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05920 hypothetical protein no data 27 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU2062 ATP-dependent DNA helicase, UvrD/REP family (TIGR) sig. 25 51
  Desulfovibrio vulgaris Miyazaki F DvMF_0764 UvrD/REP helicase (RefSeq) insig. 23 64
  Fusobacterium nucleatum SB010 HUW76_05850 UvrD-helicase domain-containing protein cofit 25 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_11780 exodeoxyribonuclease V subunit beta strong 23 43
  Dinoroseobacter shibae DFL-12 Dshi_3438 Double-strand break repair helicase AddA (RefSeq) no data 24 44
  Dickeya dianthicola ME23 DZA65_RS11480 exodeoxyribonuclease V subunit beta no data 24 54
  Variovorax sp. OAS795 ABID97_RS18290 UvrD-helicase domain-containing protein insig. 22 78
  Rahnella sp. WP5 EX31_RS20735 exodeoxyribonuclease V subunit beta strong 26 45
  Pseudomonas putida KT2440 PP_4673 Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease no data 26 41
  Ralstonia solanacearum UW163 UW163_RS12615 ATP-dependent exonuclease no data 21 64
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05086 DNA helicase/exodeoxyribonuclease V, beta subunit insig. 31 15
  Dickeya dianthicola 67-19 HGI48_RS11100 exodeoxyribonuclease V subunit beta no data 24 48
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15145 ATP-dependent exonuclease no data 21 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3460 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) insig. 26 41
  Cupriavidus basilensis FW507-4G11 RR42_RS13295 ATP-dependent exonuclease no data 24 45
  Ralstonia solanacearum PSI07 RPSI07_RS18225 ATP-dependent exonuclease no data 24 43
  Paraburkholderia graminis OAS925 ABIE53_001811 exodeoxyribonuclease V beta subunit strong 30 15
  Pseudomonas syringae pv. syringae B728a Psyr_5065 ATP-dependent DNA helicase UvrD strong 29 21
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5065 ATP-dependent DNA helicase UvrD strong 29 21
  Paraburkholderia sabiae LMG 24235 QEN71_RS23190 exodeoxyribonuclease V subunit beta insig. 30 15
  Pectobacterium carotovorum WPP14 HER17_RS16525 exodeoxyribonuclease V subunit beta strong 23 49
  Castellaniella sp019104865 MT123 ABCV34_RS02965 exodeoxyribonuclease V subunit beta sig. 23 44
  Shewanella loihica PV-4 Shew_2130 exodeoxyribonuclease V, beta subunit (RefSeq) no data 30 16
  Burkholderia phytofirmans PsJN BPHYT_RS07975 exodeoxyribonuclease V subunit beta no data 30 15
  Desulfovibrio vulgaris Hildenborough JW710 DVU2062 ATP-dependent DNA helicase, UvrD/REP family (TIGR) sig. 27 15
  Fusobacterium nucleatum SB010 HUW76_05850 UvrD-helicase domain-containing protein cofit 34 11
  Bosea sp. OAE506 ABIE41_RS02725 double-strand break repair helicase AddA strong 22 44
  Desulfovibrio vulgaris Miyazaki F DvMF_0764 UvrD/REP helicase (RefSeq) insig. 31 14
  Pseudomonas stutzeri RCH2 Psest_0213 exodeoxyribonuclease V, beta subunit no data 34 11
  Lysobacter sp. OAE881 ABIE51_RS01025 exodeoxyribonuclease V subunit beta strong 26 41
  Pseudomonas simiae WCS417 PS417_23775 exodeoxyribonuclease V subunit beta strong 24 41
  Ralstonia solanacearum GMI1000 RS_RS05965 ATP-dependent exonuclease no data 24 43
  Variovorax sp. OAS795 ABID97_RS14665 UvrD-helicase domain-containing protein sig. 23 42
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 25 41
  Rhizobium sp. OAE497 ABIE40_RS19360 double-strand break repair helicase AddA strong 24 40
  Pseudomonas sp. S08-1 OH686_12075 Exodeoxyribonuclease V beta chain cofit 32 13
  Pseudomonas syringae pv. syringae B728a Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 25 41
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 25 41
  Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 27 23
  Rhizobium sp. OAE497 ABIE40_RS11670 UvrD-helicase domain-containing protein sig. 25 34
  Ralstonia solanacearum GMI1000 RS_RS05965 ATP-dependent exonuclease no data 35 11
  Dechlorosoma suillum PS Dsui_3214 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing no data 26 18
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 28 21
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 28 21
  Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 28 21
  Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 28 23
  Shewanella oneidensis MR-1 SO2148 recB exodeoxyribonuclease V, beta subunit (NCBI ptt file) no data 31 13
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 28 21
  Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 28 21
  Pseudomonas fluorescens FW300-N2E3 AO353_06045 exodeoxyribonuclease V subunit beta strong 25 41
  Magnetospirillum magneticum AMB-1 AMB_RS21065 double-strand break repair helicase AddA no data 24 40
  Kangiella aquimarina DSM 16071 B158DRAFT_2168 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) strong 31 14
  Azospirillum sp. SherDot2 MPMX19_02722 ATP-dependent helicase/nuclease subunit A no data 24 40
  Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 30 18
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 28 21
  Shewanella sp. ANA-3 Shewana3_2246 exodeoxyribonuclease V, beta subunit (RefSeq) no data 31 13
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 27 21
  Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 26 23
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5515 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) insig. 24 45
  Ralstonia solanacearum PSI07 RPSI07_RS18225 ATP-dependent exonuclease no data 36 11
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15145 ATP-dependent exonuclease no data 33 11
  Ralstonia solanacearum UW163 UW163_RS12615 ATP-dependent exonuclease no data 33 11
  Ralstonia sp. UNC404CL21Col ABZR87_RS10785 exodeoxyribonuclease V subunit beta strong 33 11
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5151 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 25 41
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07665 exodeoxyribonuclease V subunit beta strong 35 10
  Pseudomonas stutzeri RCH2 Psest_4098 Superfamily I DNA and RNA helicases strong 27 23
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5598 ATP-dependent DNA helicase UvrD/PcrA no data 30 12
  Variovorax sp. OAS795 ABID97_RS09150 UvrD-helicase domain-containing protein sig. 28 19
  Shewanella amazonensis SB2B Sama_1901 exodeoxyribonuclease V, beta subunit (RefSeq) no data 30 13
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4243 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) strong 27 12
  Shewanella amazonensis SB2B Sama_0419 uvrD DNA-dependent helicase II (RefSeq) strong 33 9
  Ralstonia sp. UNC404CL21Col ABZR87_RS10785 exodeoxyribonuclease V subunit beta strong 28 10
  Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 24 34
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07665 exodeoxyribonuclease V subunit beta strong 38 9
  Dickeya dianthicola ME23 DZA65_RS21080 DNA helicase II sig. 34 8
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11290 double-strand break repair helicase AddA insig. 31 13
  Shewanella oneidensis MR-1 SO0467 uvrD DNA helicase II (NCBI ptt file) strong 32 9
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07665 exodeoxyribonuclease V subunit beta strong 29 13
  Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 32 9
  Vibrio cholerae E7946 ATCC 55056 CSW01_11780 exodeoxyribonuclease V subunit beta strong 39 5
  Erwinia tracheiphila SCR3 LU632_RS06190 recB exodeoxyribonuclease V subunit beta no data 34 10
  Dickeya dadantii 3937 DDA3937_RS11080 exodeoxyribonuclease V subunit beta insig. 31 17
  Shewanella loihica PV-4 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) strong 30 9
  Rhodospirillum rubrum S1H Rru_A3434 UvrD/REP helicase (NCBI) no data 28 12
  Azospirillum brasilense Sp245 AZOBR_RS12445 DNA helicase II insig. 52 5
  Fusobacterium nucleatum SB010 HUW76_07455 ATP-dependent helicase cofit 29 11
  Fusobacterium nucleatum SB010 HUW76_07175 UvrD-helicase domain-containing protein strong 28 15
  Rhodospirillum rubrum S1H Rru_A3434 UvrD/REP helicase (NCBI) no data 23 32
  Synechococcus elongatus PCC 7942 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family insig. 29 10
  Azospirillum sp. SherDot2 MPMX19_01610 ATP-dependent DNA helicase PcrA insig. 52 5
  Paraburkholderia graminis OAS925 ABIE53_000495 exodeoxyribonuclease V beta subunit insig. 42 5