Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella oneidensis MR-1 | SO0351 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | insig. | 100 | 100 |
o | Shewanella sp. ANA-3 | Shewana3_3818 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 94 | 100 |
o | Shewanella loihica PV-4 | Shew_3506 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 80 | 100 |
o | Rhodanobacter sp. FW510-T8 | OKGIIK_10010 | citB | DNA-binding response regulator | insig. | 55 | 100 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS02890 | | response regulator transcription factor | insig. | 54 | 100 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS03140 | | response regulator transcription factor | insig. | 54 | 100 |
o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09580 | | response regulator transcription factor | insig. | 54 | 100 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4961.1 | | Two-component system regulatory protein | insig. | 53 | 100 |
o | Alteromonas macleodii MIT1002 | MIT1002_03123 | | Protease production enhancer protein | insig. | 55 | 99 |
o | Caulobacter crescentus NA1000 | CCNA_01208 | | two-component response regulator | sig. | 50 | 100 |
o | Caulobacter crescentus NA1000 Δfur | CCNA_01208 | | two-component response regulator | cofit | 50 | 100 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.146.1 | | Two-component system regulatory protein | insig. | 39 | 95 |
| Shewanella sp. ANA-3 | Shewana3_1152 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 35 | 95 |
| Castellaniella sp019104865 MT123 | ABCV34_RS08970 | | response regulator transcription factor | insig. | 33 | 97 |
o | Lysobacter sp. OAE881 | ABIE51_RS00905 | | response regulator transcription factor | insig. | 37 | 95 |
| Lysobacter sp. OAE881 | ABIE51_RS14590 | | response regulator transcription factor | sig. | 33 | 95 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3859.1 | | Two-component system regulatory protein | sig. | 31 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 30 | 100 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3685 | | DNA-binding response regulator, LuxR family | insig. | 30 | 100 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS10275 | | LuxR family transcriptional regulator | sig. | 33 | 97 |
| Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 30 | 92 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_3917 | | two component transcriptional regulator, LuxR family | insig. | 32 | 100 |
| Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 31 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 30 | 100 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 30 | 92 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 31 | 98 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21335 | | response regulator transcription factor | sig. | 31 | 95 |
| Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 33 | 99 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03330 | citB | DNA-binding response regulator | cofit | 30 | 100 |
| Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 31 | 92 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14195 | | response regulator transcription factor | no data | 30 | 100 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14480 | | response regulator transcription factor | strong | 30 | 100 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 30 | 99 |
| Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 30 | 100 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 29 | 100 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 29 | 100 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 29 | 100 |
| Pseudomonas sp. RS175 | PFR28_01868 | | Transcriptional regulatory protein DegU | no data | 32 | 95 |
| Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 31 | 100 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 32 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30910 | | response regulator transcription factor | insig. | 29 | 99 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 28 | 98 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 27 | 100 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_17605 | | DNA-binding response regulator | insig. | 29 | 100 |
| Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 31 | 100 |
| Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 29 | 100 |
| Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 27 | 100 |
| Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 30 | 96 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27730 | | LuxR family transcriptional regulator | no data | 29 | 99 |
| Variovorax sp. OAS795 | ABID97_RS28185 | | response regulator transcription factor | insig. | 29 | 95 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1472 | | Regulatory protein, LuxR:Response regulator receiver | insig. | 29 | 99 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 27 | 100 |
| Ralstonia solanacearum GMI1000 | RS_RS21845 | | DNA-binding response regulator | insig. | 29 | 99 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 27 | 100 |
| Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 27 | 100 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 31 | 93 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 29 | 100 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 29 | 100 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 27 | 100 |
| Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 27 | 100 |
| Lysobacter sp. OAE881 | ABIE51_RS02650 | | response regulator transcription factor | insig. | 31 | 100 |
| Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 27 | 100 |
| Alteromonas macleodii MIT1002 | MIT1002_02154 | | Response regulator UvrY | strong | 29 | 100 |
| Alteromonas macleodii MIT1002 | MIT1002_01198 | | Transcriptional activator protein ExaE | insig. | 28 | 100 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21285 | | DNA-binding response regulator | insig. | 26 | 100 |
| Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 27 | 100 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 27 | 100 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_04095 | | LuxR family transcriptional regulator | insig. | 29 | 99 |
| Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 31 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26265 | | LuxR family transcriptional regulator | no data | 31 | 95 |
| Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 31 | 93 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS11530 | | LuxR family transcriptional regulator | insig. | 28 | 99 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1128 | | Two-component response regulator | insig. | 31 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28065 | | LuxR family transcriptional regulator | strong | 30 | 93 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1391 | | DNA-binding response regulator, LuxR family | strong | 30 | 93 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5741 | | Nitrate/nitrite response regulator protein | no data | 34 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 30 | 93 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1417 | | Regulatory protein, LuxR:Response regulator receiver | cofit | 30 | 93 |
| Shewanella loihica PV-4 | Shew_0842 | | two component LuxR family transcriptional regulator (RefSeq) | sig. | 29 | 94 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS16680 | | hypothetical protein | insig. | 29 | 100 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 27 | 97 |
| Magnetospirillum magneticum AMB-1 | AMB_RS13915 | | DNA-binding response regulator | cofit | 30 | 99 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_725 | | Nitrate/nitrite response regulator protein | strong | 33 | 94 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22075 | | hypothetical protein | strong | 32 | 94 |
| Azospirillum sp. SherDot2 | MPMX19_05115 | | Transcriptional regulatory protein DegU | insig. | 30 | 97 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS20025 | | response regulator transcription factor | insig. | 29 | 97 |
| Pseudomonas sp. RS175 | PFR28_03351 | | Virulence factors putative positive transcription regulator BvgA | insig. | 28 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS09600 | | LuxR family transcriptional regulator | insig. | 31 | 91 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14300 | | response regulator transcription factor | no data | 30 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14300 | | response regulator transcription factor | sig. | 30 | 95 |
| Pseudomonas sp. RS175 | PFR28_01811 | | Transcriptional activator protein ExaE | insig. | 30 | 93 |
| Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 29 | 100 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25185 | | hypothetical protein | sig. | 33 | 94 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_07270 | | transcriptional regulator | insig. | 28 | 100 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 29 | 91 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3890 | | regulatory protein, LuxR:Response regulator receiver | insig. | 28 | 99 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3890 | | regulatory protein, LuxR:Response regulator receiver | insig. | 28 | 99 |
| Pseudomonas fluorescens SBW25 | PFLU_RS27420 | | response regulator transcription factor | insig. | 27 | 100 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS27420 | | response regulator transcription factor | insig. | 27 | 100 |
| Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 26 | 97 |