Conservation of cofitness between Xcc-8004.4620.1 and Xcc-8004.3283.1 in Xanthomonas campestris pv. campestris strain 8004

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4620.1 Alanine racemase (EC 5.1.1.1) 1.0 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.72 3
Rhodanobacter denitrificans MT42 0.67 LRK55_RS00355 alanine racemase 0.63 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase — —
Rhodanobacter sp. FW510-T8 0.67 OKGIIK_06670 alr alanine racemase 0.63 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS00585 alanine racemase 0.63 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas sp. S08-1 0.65 OH686_13695 alanine racemase 0.49 OH686_20865 phosphoserine transaminase — —
Pseudomonas putida KT2440 0.64 PP_5269 alanine racemase, PLP-binding 0.49 PP_1768 phosphoserine aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS29370 alanine racemase 0.48 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_814 Alanine racemase (EC 5.1.1.1) 0.47 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas simiae WCS417 0.62 PS417_27695 alanine racemase 0.48 PS417_08120 MFS transporter — —
Pseudomonas fluorescens SBW25 0.62 PFLU_RS29370 alanine racemase 0.48 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_0237 alanine racemase 0.48 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_0237 alanine racemase 0.48 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2146 Alanine racemase (EC 5.1.1.1) 0.36 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_09145 alanine racemase 0.48 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_12630 alanine racemase 0.48 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_4393 Alanine racemase (EC 5.1.1.1) 0.48 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas sp. RS175 0.61 PFR28_04397 Alanine racemase 0.47 PFR28_00906 Phosphoserine aminotransferase — —
Pseudomonas stutzeri RCH2 0.41 Psest_0699 alanine racemase 0.49 Psest_1983 phosphoserine aminotransferase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS01920 alanine racemase 0.50 BWI76_RS09755 phosphoserine transaminase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1422 Alanine racemase (EC 5.1.1.1) 0.51 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_2013 alanine racemase 0.46 B158DRAFT_2322 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS23405 alanine racemase 0.51 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase low > 55
Escherichia coli BL21 0.40 ECD_03925 alanine racemase, biosynthetic, PLP-binding 0.50 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase low > 61
Escherichia coli BW25113 0.40 b4053 alr alanine racemase (NCBI) 0.50 b0907 serC phosphoserine aminotransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03990 Alanine racemase, biosynthetic 0.50 OHPLBJKB_02761 Phosphoserine aminotransferase — —
Escherichia fergusonii Becca 0.40 EFB2_04547 Alanine racemase, biosynthetic 0.51 EFB2_03157 Phosphoserine aminotransferase 0.59 70
Escherichia coli ECRC62 0.40 BNILDI_06350 alr alanine racemase 0.50 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Escherichia coli ECOR38 0.40 HEPCGN_11540 alr alanine racemase 0.51 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Escherichia coli ECOR27 0.40 NOLOHH_05175 alr alanine racemase 0.50 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Escherichia coli ECRC98 0.40 JDDGAC_16560 alr alanine racemase 0.50 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 86
Escherichia coli ECRC102 0.40 NIAGMN_10770 alr alanine racemase 0.50 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC100 0.40 OKFHMN_12925 alr alanine racemase 0.50 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 80
Escherichia coli ECRC101 0.40 MCAODC_03435 alr alanine racemase 0.50 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Enterobacter sp. TBS_079 0.40 MPMX20_02698 Alanine racemase, catabolic 0.50 MPMX20_01566 Phosphoserine aminotransferase low > 85
Escherichia coli ECRC99 0.40 KEDOAH_15225 alr alanine racemase 0.50 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dadantii 3937 0.39 DDA3937_RS17510 alanine racemase 0.53 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_01955 alanine racemase 0.47 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase — —
Erwinia tracheiphila SCR3 0.39 LU632_RS13065 dadX catabolic alanine racemase DadX 0.52 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Enterobacter asburiae PDN3 0.39 EX28DRAFT_4259 alanine racemase 0.48 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10740 alanine racemase 0.48 HSERO_RS18435 MFS transporter — —
Pantoea sp. MT58 0.39 IAI47_08895 catabolic alanine racemase DadX 0.51 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dianthicola 67-19 0.39 HGI48_RS17565 alanine racemase 0.53 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dianthicola ME23 0.39 DZA65_RS18650 alanine racemase 0.52 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Ralstonia solanacearum GMI1000 0.39 RS_RS06875 alanine racemase 0.47 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pectobacterium carotovorum WPP14 0.39 HER17_RS03655 alanine racemase 0.52 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase — —
Rahnella sp. WP5 0.39 EX31_RS11885 alanine racemase 0.50 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS11665 alanine racemase 0.48 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase — —
Serratia liquefaciens MT49 0.38 IAI46_22945 alanine racemase 0.50 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase low > 86
Shewanella amazonensis SB2B 0.38 Sama_3057 alr alanine racemase (RefSeq) 0.43 Sama_1732 phosphoserine aminotransferase (RefSeq) — —
Ralstonia solanacearum PSI07 0.38 RPSI07_RS17275 alanine racemase 0.47 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella oneidensis MR-1 0.38 SO3916 alr alanine racemase, biosynthetic (NCBI ptt file) 0.42 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS00205 alanine racemase 0.47 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella sp. ANA-3 0.37 Shewana3_0714 alr alanine racemase (RefSeq) 0.42 Shewana3_1973 phosphoserine aminotransferase (RefSeq) — —
Ralstonia solanacearum UW163 0.37 UW163_RS13535 alanine racemase 0.47 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dechlorosoma suillum PS 0.37 Dsui_2411 alanine racemase 0.48 Dsui_1939 phosphoserine aminotransferase — —
Shewanella loihica PV-4 0.37 Shew_3277 alr alanine racemase (RefSeq) 0.43 Shew_1950 phosphoserine aminotransferase (RefSeq) — —
Paraburkholderia graminis OAS925 0.37 ABIE53_002527 alanine racemase 0.41 ABIE53_003159 phosphoserine aminotransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00589 alanine racemase 0.49 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme — —
Alteromonas macleodii MIT1002 0.37 MIT1002_00544 Alanine racemase 0.49 MIT1002_02192 Phosphoserine aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF1915 Alanine racemase (EC 5.1.1.1) 0.48 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Variovorax sp. SCN45 0.36 GFF5109 Alanine racemase (EC 5.1.1.1) 0.49 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS06315 alanine racemase 0.49 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase — —
Variovorax sp. OAS795 0.35 ABID97_RS03685 alanine racemase 0.46 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS12240 alanine racemase 0.49 BPHYT_RS14915 phosphoserine aminotransferase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3382 Alanine racemase, catabolic (EC 5.1.1.1) 0.49 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS12035 alanine racemase 0.45 RR42_RS04455 MFS transporter — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS06375 alanine racemase 0.48 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase — —
Marinobacter adhaerens HP15 0.33 HP15_630 alanine racemase 0.47 HP15_1361 phosphoserine aminotransferase — —
Acinetobacter radioresistens SK82 0.31 MPMX26_01153 Alanine racemase 0.48 MPMX26_02219 Phosphoserine aminotransferase — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS08850 alanine racemase 0.63 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase — —
Lysobacter sp. OAE881 0.25 ABIE51_RS09255 alanine racemase 0.79 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase — —

Not shown: 22 genomes with orthologs for Xcc-8004.4620.1 only; 9 genomes with orthologs for Xcc-8004.3283.1 only