| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.3681.1 | | RNA polymerase sigma factor RpoE | 1.0 | Xcc-8004.1147.1 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.44 | 5 |
| Lysobacter sp. OAE881 | 0.79 | ABIE51_RS13890 | | RNA polymerase sigma factor RpoE | 0.75 | ABIE51_RS17320 | | aminopeptidase P N-terminal domain-containing protein | 0.95 | 2 |
| Dyella japonica UNC79MFTsu3.2 | 0.66 | ABZR86_RS07180 | | RNA polymerase sigma factor RpoE | 0.58 | ABZR86_RS11970 | | aminopeptidase P N-terminal domain-containing protein | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_07900 | rpoE | RNA polymerase sigma factor RpoE | 0.58 | OKGIIK_12200 | pepP | Xaa-Pro aminopeptidase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS16940 | | RNA polymerase sigma factor RpoE | 0.59 | LRK54_RS11695 | | aminopeptidase P N-terminal domain-containing protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS16655 | | RNA polymerase sigma factor RpoE | 0.59 | LRK55_RS11420 | | aminopeptidase P N-terminal domain-containing protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_3100 | | RNA polymerase sigma factor RpoE | 0.58 | Psest_0175 | | Xaa-Pro aminopeptidase | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | 0.55 | PFLU_RS28945 | | Xaa-Pro aminopeptidase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_2756 | | RNA polymerase sigma-H factor AlgT | 0.56 | Pf6N2E2_4480 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_04575 | | RNA polymerase subunit sigma | 0.55 | AO356_13010 | | Xaa-Pro aminopeptidase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_3323 | | RNA polymerase sigma-H factor AlgT | 0.55 | Pf1N1B4_2229 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | — | — |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00690 | | RNA polymerase sigma-H factor | 0.56 | PFR28_04321 | | Xaa-Pro aminopeptidase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | 0.55 | PFLU_RS28945 | | Xaa-Pro aminopeptidase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_4516 | | RNA polymerase sigma-H factor AlgT | 0.55 | PfGW456L13_896 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_07120 | | RNA polymerase sigma-H factor | 0.55 | PS417_27285 | | Xaa-Pro aminopeptidase | 0.30 | 24 |
| Pseudomonas putida KT2440 | 0.59 | PP_1427 | | RNA polymerase sigma E factor | 0.55 | PP_5200 | | proline aminopeptidase P II | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_17625 | | RNA polymerase subunit sigma | 0.55 | AO353_08760 | | Xaa-Pro aminopeptidase | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.55 | Psyr_0321 | | aminopeptidase P, Metallo peptidase, MEROPS family M24B | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.55 | Psyr_0321 | | aminopeptidase P, Metallo peptidase, MEROPS family M24B | low | > 86 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_20045 | | RNA polymerase sigma factor RpoE | 0.58 | OH686_11205 | | Xaa-Pro aminopeptidase | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.59 | B158DRAFT_2180 | | RNA polymerase, sigma-24 subunit, RpoE | 0.50 | B158DRAFT_0533 | | Xaa-Pro aminopeptidase | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_02719 | | Sigma-24 | 0.44 | MIT1002_02984 | | Xaa-Pro aminopeptidase | — | — |
| Pantoea sp. MT58 | 0.56 | IAI47_04850 | | RNA polymerase sigma factor RpoE | 0.42 | IAI47_03750 | | Xaa-Pro aminopeptidase | — | — |
| Erwinia tracheiphila SCR3 | 0.56 | LU632_RS15425 | rpoE | RNA polymerase sigma factor RpoE | 0.42 | LU632_RS05880 | pepP | Xaa-Pro aminopeptidase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.56 | MPMX20_03444 | | ECF RNA polymerase sigma-E factor | 0.41 | MPMX20_03767 | | Xaa-Pro aminopeptidase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_04355 | | RNA polymerase, sigma-24 subunit, RpoE | 0.40 | H281DRAFT_04247 | | aminopeptidase P Metallo peptidase. MEROPS family M24B | — | — |
| Paraburkholderia graminis OAS925 | 0.56 | ABIE53_003043 | | RNA polymerase sigma-70 factor (ECF subfamily) | 0.41 | ABIE53_003487 | | Xaa-Pro aminopeptidase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS14405 | | RNA polymerase sigma factor RpoE | 0.40 | BPHYT_RS16575 | | Xaa-Pro aminopeptidase | — | — |
| Serratia liquefaciens MT49 | 0.56 | IAI46_19585 | | RNA polymerase sigma factor RpoE | 0.44 | IAI46_20875 | | Xaa-Pro aminopeptidase | — | — |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_0072 | | RNA polymerase sigma factor RpoE | 0.42 | EX28DRAFT_2960 | | Xaa-Pro aminopeptidase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS04575 | | RNA polymerase sigma factor RpoE | 0.40 | QEN71_RS26760 | | aminopeptidase P N-terminal domain-containing protein | low | > 153 |
| Dechlorosoma suillum PS | 0.56 | Dsui_2453 | | RNA polymerase sigma factor RpoE | 0.42 | Dsui_1591 | | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS14560 | | RNA polymerase sigma factor RpoE | 0.41 | ECOLIN_RS16190 | | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli ECRC62 | 0.55 | BNILDI_11850 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | BNILDI_09950 | pepP | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_20520 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | HEPCGN_18795 | pepP | Xaa-Pro aminopeptidase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS09625 | | RNA polymerase sigma factor RpoE | 0.42 | HSERO_RS03510 | | proline aminopeptidase P II | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_01134 | | ECF RNA polymerase sigma-E factor | 0.41 | OHPLBJKB_00807 | | Xaa-Pro aminopeptidase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2107 | | RNA polymerase sigma factor RpoE | 0.41 | GFF3009 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_13050 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | NOLOHH_11415 | pepP | Xaa-Pro aminopeptidase | — | — |
| Shewanella loihica PV-4 | 0.55 | Shew_1048 | | RNA polymerase sigma factor RpoE (RefSeq) | 0.35 | Shew_2358 | | peptidase M24 (RefSeq) | low | > 60 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS21355 | | RNA polymerase sigma factor RpoE | 0.43 | BWI76_RS23895 | | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli BL21 | 0.55 | ECD_02467 | | RNA polymerase sigma E factor | 0.41 | ECD_02740 | | proline aminopeptidase P II | — | — |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_06845 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | KEDOAH_08635 | pepP | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_21375 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | OKFHMN_19505 | pepP | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli ECRC101 | 0.55 | MCAODC_11905 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | MCAODC_10025 | pepP | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli BW25113 | 0.55 | b2573 | rpoE | RNA polymerase, sigma 24 (sigma E) factor (NCBI) | 0.41 | b2908 | pepP | proline aminopeptidase P II (NCBI) | — | — |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_25040 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | JDDGAC_23145 | pepP | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_19145 | rpoE | RNA polymerase sigma factor RpoE | 0.41 | NIAGMN_17270 | pepP | Xaa-Pro aminopeptidase | — | — |
| Rahnella sp. WP5 | 0.55 | EX31_RS21800 | | RNA polymerase sigma factor RpoE | 0.42 | EX31_RS21495 | | Xaa-Pro aminopeptidase | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_01323 | | ECF RNA polymerase sigma-E factor | 0.41 | EFB2_00994 | | Xaa-Pro aminopeptidase | — | — |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS05780 | | RNA polymerase sigma factor RpoE | 0.42 | HER17_RS19115 | | Xaa-Pro aminopeptidase | — | — |
| Dickeya dadantii 3937 | 0.55 | DDA3937_RS15765 | | RNA polymerase sigma factor RpoE | 0.41 | DDA3937_RS02395 | | Xaa-Pro aminopeptidase | low | > 74 |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS14445 | | RNA polymerase sigma factor RpoE | 0.41 | RALBFv3_RS11710 | | Xaa-Pro aminopeptidase | — | — |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS15850 | | RNA polymerase sigma factor RpoE | 0.41 | HGI48_RS02350 | | Xaa-Pro aminopeptidase | low | > 71 |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS11910 | | RNA polymerase sigma factor RpoE | 0.41 | UW163_RS01875 | | Xaa-Pro aminopeptidase | — | — |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS19015 | | RNA polymerase sigma factor RpoE | 0.43 | RPSI07_RS21505 | | Xaa-Pro aminopeptidase | — | — |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS16930 | | RNA polymerase sigma factor RpoE | 0.41 | DZA65_RS02455 | | Xaa-Pro aminopeptidase | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.55 | RS_RS05225 | | RNA polymerase sigma factor RpoE | 0.44 | RS_RS02535 | | Xaa-Pro aminopeptidase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS14080 | | RNA polymerase sigma factor RpoE | 0.44 | RR42_RS02745 | | Xaa-Pro aminopeptidase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS10165 | | RNA polymerase sigma factor RpoE | 0.43 | ABZR87_RS07665 | | aminopeptidase P N-terminal domain-containing protein | low | > 80 |
| Shewanella amazonensis SB2B | 0.51 | Sama_0874 | | RNA polymerase sigma factor RpoE (RefSeq) | 0.37 | Sama_1534 | | xaa-pro aminopeptidase (RefSeq) | low | > 62 |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_1573 | | RNA polymerase sigma factor RpoE | 0.39 | Ac3H11_652 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | — | — |
| Variovorax sp. OAS795 | 0.49 | ABID97_RS08330 | | RNA polymerase sigma factor RpoE | 0.40 | ABID97_RS02460 | | aminopeptidase P N-terminal domain-containing protein | low | > 91 |
| Variovorax sp. SCN45 | 0.49 | GFF3863 | | RNA polymerase sigma factor RpoE | 0.40 | GFF7179 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF3339 | | RNA polymerase sigma factor RpoE | 0.38 | GFF2485 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 90 |
| Synechococcus elongatus PCC 7942 | 0.26 | Synpcc7942_1923 | sigG | RNA polymerase sigma factor RpoE | 0.37 | Synpcc7942_0075 | pepP | aminopeptidase P. Metallo peptidase. MEROPS family M24B | low | > 38 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.23 | ABZR88_RS19220 | | sigma-70 family RNA polymerase sigma factor | 0.25 | ABZR88_RS17305 | | aminopeptidase P N-terminal domain-containing protein | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.22 | Echvi_2047 | | RNA polymerase sigma factor, sigma-70 family | 0.24 | Echvi_0053 | | Xaa-Pro aminopeptidase | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS15190 | | RNA polymerase sigma factor | 0.24 | CA265_RS22815 | | X-Pro aminopeptidase | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_11965 | | RNA polymerase subunit sigma | 0.28 | CA264_20445 | | peptidase M24 family protein | low | > 74 |
| Bacteroides ovatus ATCC 8483 | 0.20 | BACOVA_00669 | | Sigma-70 region 2 | 0.19 | BACOVA_01617 | | peptidase, M24 family | low | > 94 |
| Bifidobacterium breve UCC2003 | 0.19 | BBR_RS15930 | | RNA polymerase sigma factor | 0.20 | BBR_RS16850 | | peptidase M24 family protein | low | > 34 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.19 | BT4571 | | RNA polymerase ECF-type sigma factor (NCBI ptt file) | 0.18 | BT2522 | | Xaa-Pro aminopeptidase (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.19 | HMPREF1181_RS08110 | | sigma-70 family RNA polymerase sigma factor | 0.19 | HMPREF1181_RS00920 | | aminopeptidase P family protein | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.18 | HMPREF1078_RS13725 | | sigma-70 family RNA polymerase sigma factor | 0.15 | HMPREF1078_RS02325 | | Xaa-Pro aminopeptidase | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.17 | ABI39_RS09920 | | sigma-70 family RNA polymerase sigma factor | 0.18 | ABI39_RS10560 | | aminopeptidase P family protein | low | > 72 |
Not shown: 10 genomes with orthologs for Xcc-8004.3681.1 only; 4 genomes with orthologs for Xcc-8004.1147.1 only