| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_013300 | | efflux transporter outer membrane subunit | 1.0 | TX73_020265 | | flagellar basal body P-ring protein FlgI | 0.49 | 13 |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS17255 | | transporter | 0.37 | HSERO_RS10215 | | flagellar P-ring protein FlgI | low | > 78 |
| Magnetospirillum magneticum AMB-1 | 0.36 | AMB_RS17355 | | membrane protein | 0.59 | AMB_RS19360 | | flagellar basal body P-ring protein | low | > 64 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_18 | | Outer membrane pyoverdine eflux protein | 0.43 | Pf6N2E2_2625 | | Flagellar P-ring protein FlgI | low | > 103 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_02870 | | Antibiotic efflux pump outer membrane protein ArpC | 0.43 | PFR28_00807 | | Flagellar P-ring protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_21160 | | RND transporter | 0.43 | AO356_03915 | | flagellar biosynthesis protein FlgI | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS19435 | | efflux transporter outer membrane subunit | 0.41 | PFLU_RS21845 | | flagellar basal body P-ring protein FlgI | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS19435 | | efflux transporter outer membrane subunit | 0.41 | PFLU_RS21845 | | flagellar basal body P-ring protein FlgI | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_2391 | | Outer membrane pyoverdine eflux protein | 0.42 | PfGW456L13_4384 | | Flagellar P-ring protein FlgI | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_1968 | | RND efflux system, outer membrane lipoprotein, NodT | 0.42 | Psyr_3473 | | Flagellar P-ring protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_1968 | | RND efflux system, outer membrane lipoprotein, NodT | 0.42 | Psyr_3473 | | Flagellar P-ring protein | low | > 86 |
| Pseudomonas simiae WCS417 | 0.27 | PS417_17645 | | RND transporter | 0.41 | PS417_19875 | | flagellar P-ring protein FlgI | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.27 | GFF3903 | | RND efflux system, outer membrane lipoprotein CmeC | 0.37 | GFF1408 | | Flagellar P-ring protein FlgI | low | > 90 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_136 | | Outer membrane pyoverdine eflux protein | 0.42 | Pf1N1B4_3571 | | Flagellar P-ring protein FlgI | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_25480 | | multidrug transporter | 0.42 | AO353_18610 | | flagellar biosynthesis protein FlgI | low | > 101 |
| Rhodospirillum rubrum S1H | 0.25 | Rru_A3237 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.59 | Rru_A2849 | | Flagellar P-ring protein (NCBI) | low | > 58 |
| Dechlorosoma suillum PS | 0.25 | Dsui_1870 | | efflux transporter, outer membrane factor lipoprotein, NodT family | 0.37 | Dsui_1739 | | flagellar basal-body P-ring protein | low | > 51 |
| Pseudomonas putida KT2440 | 0.25 | PP_4211 | | outer membrane pyoverdine efflux protein | 0.42 | PP_4383 | | Flagellar P-ring protein | low | > 96 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS09200 | | efflux transporter outer membrane subunit | 0.37 | QEN71_RS28885 | | flagellar basal body P-ring protein FlgI | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.24 | BPHYT_RS10540 | | secretion protein | 0.38 | BPHYT_RS18860 | | flagellar P-ring protein FlgI | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00347 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.38 | H281DRAFT_05769 | | flagellar P-ring protein precursor FlgI | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_005789 | | multidrug efflux system outer membrane protein | 0.38 | ABIE53_000094 | | flagellar P-ring protein precursor FlgI | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS31140 | | hypothetical protein | 0.39 | RR42_RS35690 | | flagellar P-ring protein FlgI | low | > 128 |
| Enterobacter sp. TBS_079 | 0.21 | MPMX20_02191 | | Outer membrane protein OprM | 0.37 | MPMX20_01759 | | Flagellar P-ring protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.21 | EX28DRAFT_1355 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.37 | EX28DRAFT_1852 | | Flagellar basal-body P-ring protein | low | > 76 |
| Variovorax sp. SCN45 | 0.21 | GFF3820 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | 0.39 | GFF5722 | | Flagellar P-ring protein FlgI | low | > 127 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.21 | DVU0062 | | RND efflux system, outer membrane protein, NodT family (TIGR) | 0.44 | DVU0516 | flgI | flagellar P-ring protein FlgI (TIGR) | low | > 55 |
| Pseudomonas stutzeri RCH2 | 0.21 | Psest_0311 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.39 | Psest_2961 | | Flagellar basal-body P-ring protein | low | > 67 |
| Serratia liquefaciens MT49 | 0.21 | IAI46_16730 | | efflux transporter outer membrane subunit | 0.38 | IAI46_15925 | | flagellar basal body P-ring protein FlgI | low | > 86 |
| Desulfovibrio vulgaris Miyazaki F | 0.21 | DvMF_2162 | | RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) | 0.43 | DvMF_2521 | flgI | flagellar basal body P-ring protein (RefSeq) | low | > 51 |
| Bosea sp. OAE506 | 0.20 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | 0.72 | ABIE41_RS13290 | | flagellar basal body P-ring protein FlgI | low | > 77 |
| Ralstonia solanacearum PSI07 | 0.20 | RPSI07_RS03385 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.38 | RPSI07_RS01425 | | flagellar basal body P-ring protein FlgI | low | > 81 |
| Shewanella sp. ANA-3 | 0.20 | Shewana3_3454 | | outer membrane efflux protein (RefSeq) | 0.42 | Shewana3_1328 | flgI | flagellar basal body P-ring protein (RefSeq) | low | > 73 |
| Ralstonia solanacearum IBSBF1503 | 0.20 | RALBFv3_RS21910 | | RND transporter | 0.38 | RALBFv3_RS21705 | | flagellar basal body P-ring protein FlgI | low | > 76 |
| Ralstonia solanacearum UW163 | 0.20 | UW163_RS17275 | | RND transporter | 0.38 | UW163_RS17480 | | flagellar basal body P-ring protein FlgI | — | — |
| Dickeya dianthicola 67-19 | 0.20 | HGI48_RS14115 | | efflux transporter outer membrane subunit | 0.35 | HGI48_RS13490 | | flagellar basal body P-ring protein FlgI | low | > 71 |
| Rhizobium sp. OAE497 | 0.20 | ABIE40_RS15365 | | efflux transporter outer membrane subunit | 0.45 | ABIE40_RS02995 | | flagellar basal body P-ring protein FlgI | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.20 | ABZR86_RS03390 | | efflux transporter outer membrane subunit | 0.38 | ABZR86_RS20110 | | flagellar basal body P-ring protein FlgI | low | > 74 |
| Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS07795 | | TolC family protein | 0.37 | ECOLIN_RS06250 | | flagellar basal body P-ring protein FlgI | — | — |
| Escherichia fergusonii Becca | 0.20 | EFB2_02632 | | putative efflux pump outer membrane protein TtgC | 0.37 | EFB2_02894 | | Flagellar P-ring protein | low | > 86 |
| Agrobacterium fabrum C58 | 0.20 | Atu2552 | | nodulation protein T precursor | 0.46 | Atu0550 | | flagellar P-ring protein precursor | — | — |
| Shewanella oneidensis MR-1 | 0.20 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | 0.41 | SO3242 | flgI | flagellar P-ring protein FlgI (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC98 | 0.20 | JDDGAC_05035 | tolC | multidrug transporter | 0.37 | JDDGAC_07300 | flgI | flagellar basal body P-ring protein FlgI | low | > 86 |
| Escherichia coli ECRC102 | 0.20 | NIAGMN_26660 | tolC | multidrug transporter | 0.37 | NIAGMN_24190 | flgI | flagellar basal body P-ring protein FlgI | — | — |
| Lysobacter sp. OAE881 | 0.20 | ABIE51_RS10130 | | efflux transporter outer membrane subunit | 0.41 | ABIE51_RS16705 | | flagellar basal body P-ring protein FlgI | low | > 62 |
| Escherichia coli ECRC99 | 0.20 | KEDOAH_26285 | tolC | multidrug transporter | 0.37 | KEDOAH_24115 | flgI | flagellar basal body P-ring protein FlgI | — | — |
| Escherichia coli ECRC101 | 0.20 | MCAODC_15780 | tolC | multidrug transporter | 0.37 | MCAODC_23000 | flgI | flagellar basal body P-ring protein FlgI | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.20 | LU632_RS09495 | | efflux transporter outer membrane subunit | 0.35 | LU632_RS10430 | | flagellar basal body P-ring protein FlgI | low | > 74 |
| Dickeya dadantii 3937 | 0.19 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | 0.36 | DDA3937_RS13445 | | flagellar basal body P-ring protein FlgI | low | > 74 |
| Pantoea sp. MT58 | 0.19 | IAI47_13160 | | efflux transporter outer membrane subunit | 0.34 | IAI47_12130 | | flagellar basal body P-ring protein FlgI | 0.31 | 65 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_4447 | | RND efflux system, outer membrane lipoprotein CmeC | 0.35 | Ac3H11_1369 | | Flagellar P-ring protein FlgI | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | 0.38 | ABZR87_RS22255 | | flagellar basal body P-ring protein FlgI | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.19 | RS_RS21025 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.38 | RS_RS18830 | | flagellar P-ring protein FlgI | low | > 80 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.37 | NOLOHH_21170 | flgI | flagellar basal body P-ring protein FlgI | low | > 75 |
| Escherichia coli ECRC62 | 0.19 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.37 | BNILDI_19330 | flgI | flagellar basal body P-ring protein FlgI | low | > 75 |
| Pseudomonas sp. S08-1 | 0.19 | OH686_16055 | | Multidrug efflux system, outer membrane factor lipoprotein | 0.40 | OH686_02940 | | Flagellar P-ring protein FlgI | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.19 | Xcc-8004.3526.1 | | Outer membrane component of tripartite multidrug resistance system | 0.39 | Xcc-8004.2786.1 | | Flagellar P-ring protein FlgI | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.19 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | 0.37 | GFF3361 | | Flagellar P-ring protein FlgI | low | > 78 |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.37 | OKFHMN_03640 | flgI | flagellar basal body P-ring protein FlgI | — | — |
| Escherichia coli BL21 | 0.18 | ECD_00533 | | copper/silver efflux system, outer membrane component | 0.37 | ECD_01076 | | putative flagellar basal body protein | low | > 61 |
| Escherichia coli BW25113 | 0.18 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | 0.37 | b1080 | flgI | homolog of Salmonella P-ring of flagella basal body (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.18 | OHPLBJKB_03137 | | Cation efflux system protein CusC | 0.37 | OHPLBJKB_02585 | | Flagellar P-ring protein | low | > 73 |
| Dickeya dianthicola ME23 | 0.18 | DZA65_RS08525 | | efflux transporter outer membrane subunit | 0.35 | DZA65_RS13975 | | flagellar basal body P-ring protein FlgI | low | > 75 |
| Caulobacter crescentus NA1000 | 0.18 | CCNA_00849 | | outer membrane efflux protein | 0.52 | CCNA_02665 | | flagellar P-ring protein FlgI | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.18 | CCNA_00849 | | outer membrane efflux protein | 0.52 | CCNA_02665 | | flagellar P-ring protein FlgI | low | > 67 |
| Castellaniella sp019104865 MT123 | 0.18 | ABCV34_RS01860 | | efflux transporter outer membrane subunit | 0.38 | ABCV34_RS05735 | | flagellar basal body P-ring protein FlgI | low | > 48 |
| Vibrio cholerae E7946 ATCC 55056 | 0.16 | CSW01_07065 | | multidrug resistance protein | 0.42 | CSW01_11190 | | flagellar P-ring protein | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.15 | LRK55_RS13900 | | efflux transporter outer membrane subunit | 0.40 | LRK55_RS13180 | | flagellar basal body P-ring protein FlgI | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.15 | LRK54_RS14180 | | efflux transporter outer membrane subunit | 0.40 | LRK54_RS13440 | | flagellar basal body P-ring protein FlgI | low | > 59 |
| Alteromonas macleodii MIT1002 | 0.14 | MIT1002_00868 | | Toluene efflux pump outer membrane protein TtgF precursor | 0.38 | MIT1002_01048 | | Basal body P-ring protein | low | > 70 |
Not shown: 15 genomes with orthologs for TX73_013300 only; 13 genomes with orthologs for TX73_020265 only