Conservation of cofitness between TX73_004290 and TX73_007780 in Rhodopseudomonas palustris CGA009

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_004290 cytochrome c oxidase subunit I 1.0 TX73_007780 oxygen-dependent coproporphyrinogen oxidase 0.89 8
Agrobacterium fabrum C58 0.75 Atu0768 cytochrome-c oxidase chain I 0.46 Atu2247 coproporphyrinogen III oxidase
Rhizobium sp. OAE497 0.74 ABIE40_RS04065 cytochrome c oxidase subunit I 0.47 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase
Bosea sp. OAE506 0.74 ABIE41_RS22950 cytochrome c oxidase subunit I 0.48 ABIE41_RS11175 oxygen-dependent coproporphyrinogen oxidase
Sinorhizobium meliloti 1021 0.73 SMc00010 cytochrome C oxidase polypeptide I transmembrane protein 0.46 SMc00180 coproporphyrinogen III oxidase
Caulobacter crescentus NA1000 Δfur 0.70 CCNA_03517 cytochrome c oxidase polypeptide I coxA 0.55 CCNA_00540 coproporphyrinogen III oxidase
Caulobacter crescentus NA1000 0.70 CCNA_03517 cytochrome c oxidase polypeptide I coxA 0.55 CCNA_00540 coproporphyrinogen III oxidase
Azospirillum sp. SherDot2 0.70 MPMX19_00885 Cytochrome c oxidase subunit 1 0.48 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase
Azospirillum brasilense Sp245 0.70 AZOBR_RS10585 cytochrome C oxidase subunit I 0.48 AZOBR_RS20735 coproporphyrinogen III oxidase
Brevundimonas sp. GW460-12-10-14-LB2 0.69 A4249_RS00110 cytochrome c oxidase subunit I 0.55 A4249_RS02545 oxygen-dependent coproporphyrinogen oxidase
Sphingomonas koreensis DSMZ 15582 0.66 Ga0059261_2008 cytochrome c oxidase, subunit I 0.47 Ga0059261_3217 coproporphyrinogen oxidase (EC 1.3.3.3)
Phaeobacter inhibens DSM 17395 0.61 PGA1_c06710 cytochrome c oxidase subunit 1-beta 0.33 PGA1_c29970 coproporphyrinogen 3 oxidase, aerobic
Ralstonia solanacearum PSI07 0.59 RPSI07_RS22360 cytochrome c oxidase subunit I 0.31 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase
Ralstonia solanacearum GMI1000 0.59 RS_RS01790 cytochrome c oxidase subunit I 0.31 RS_RS11000 coproporphyrinogen III oxidase
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS10950 cytochrome c oxidase subunit I 0.30 RALBFv3_RS03550 coproporphyrinogen III oxidase
Dinoroseobacter shibae DFL-12 0.59 Dshi_2383 Cytochrome c oxidase subunit I type (RefSeq) 0.39 Dshi_0674 Coproporphyrinogen oxidase (RefSeq)
Ralstonia solanacearum UW163 0.59 UW163_RS02630 cytochrome c oxidase subunit I 0.30 UW163_RS10120 coproporphyrinogen III oxidase
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS06800 cytochrome c oxidase subunit I 0.29 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase
Paraburkholderia graminis OAS925 0.57 ABIE53_000674 cytochrome c oxidase subunit 1 0.32 ABIE53_001544 coproporphyrinogen III oxidase 0.61 18
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS02645 cytochrome oxidase subunit I 0.32 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_01993 cytochrome c oxidase subunit 1 0.32 H281DRAFT_04520 coproporphyrinogen oxidase
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS01500 cytochrome c oxidase subunit I 0.33 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase
Castellaniella sp019104865 MT123 0.56 ABCV34_RS13270 cytochrome c oxidase subunit I 0.33 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase low > 48
Variovorax sp. OAS795 0.56 ABID97_RS12000 cytochrome c oxidase subunit I 0.33 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS01880 cytochrome oxidase subunit I 0.31 RR42_RS04725 coproporphyrinogen III oxidase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF689 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.31 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas fluorescens SBW25 0.55 PFLU_RS00295 cytochrome c oxidase subunit I 0.34 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS00295 cytochrome c oxidase subunit I 0.34 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Acidovorax sp. GW101-3H11 0.55 Ac3H11_3891 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.33 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas simiae WCS417 0.55 PS417_00305 cytochrome oxidase subunit I 0.34 PS417_00120 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_10835 cytochrome oxidase subunit I 0.34 AO353_10665 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4099 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.33 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas sp. RS175 0.54 PFR28_04690 Cytochrome c oxidase subunit 1 0.34 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase
Pseudomonas sp. S08-1 0.54 OH686_12320 cytochrome c oxidase, subunit I 0.34 OH686_12490 Coproporphyrinogen III oxidase, aerobic
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_11165 cytochrome oxidase subunit I 0.33 AO356_11310 coproporphyrinogen III oxidase
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS20785 cytochrome oxidase subunit I 0.33 HSERO_RS17765 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1854 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.33 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_614 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.33 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas stutzeri RCH2 0.54 Psest_4327 cytochrome c oxidase, subunit I 0.32 Psest_0028 Coproporphyrinogen III oxidase low > 67
Shewanella loihica PV-4 0.54 Shew_0124 cytochrome-c oxidase (RefSeq) 0.36 Shew_3729 coproporphyrinogen III oxidase (RefSeq) low > 60
Pseudomonas putida KT2440 0.53 PP_0104 Cytochrome c oxidase subunit 1 0.33 PP_0073 Coproporphyrinogen-III oxidase, aerobic
Shewanella oneidensis MR-1 0.53 SO4607 cytochrome c oxidase, subunit I (NCBI ptt file) 0.35 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.53 Shewana3_3992 cytochrome c oxidase, subunit I (RefSeq) 0.35 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0136 cytochrome c oxidase, subunit I 0.31 B158DRAFT_0404 coproporphyrinogen oxidase (EC 1.3.3.3)
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_16520 ctaD cytochrome c oxidase subunit I 0.36 OKGIIK_16050 hemF oxygen-dependent coproporphyrinogen oxidase
Rhodanobacter denitrificans MT42 0.53 LRK55_RS06860 cytochrome c oxidase subunit I 0.34 LRK55_RS09455 oxygen-dependent coproporphyrinogen oxidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS07120 cytochrome c oxidase subunit I 0.34 LRK54_RS09795 oxygen-dependent coproporphyrinogen oxidase
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.4845.1 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.34 Xcc-8004.5101.1 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS12925 cytochrome c oxidase subunit I 0.35 ABZR86_RS13525 oxygen-dependent coproporphyrinogen oxidase
Shewanella amazonensis SB2B 0.53 Sama_3484 cytochrome-c oxidase (RefSeq) 0.34 Sama_0050 coproporphyrinogen III oxidase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.52 MIT1002_04034 Cytochrome c oxidase subunit 1 0.33 MIT1002_00026 Coproporphyrinogen-III oxidase, aerobic
Lysobacter sp. OAE881 0.51 ABIE51_RS19205 cytochrome c oxidase subunit I 0.33 ABIE51_RS02020 oxygen-dependent coproporphyrinogen oxidase
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2603 ctaD Cytochrome-c oxidase 0.35 Synpcc7942_0674 hemF coproporphyrinogen III oxidase
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_01315 cytochrome c oxidase subunit I 0.32 CA264_05715 coproporphyrinogen III oxidase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS03660 cbb3-type cytochrome c oxidase subunit I 0.28 ABZR88_RS09505 oxygen-dependent coproporphyrinogen oxidase
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_2103 Heme/copper-type cytochrome/quinol oxidases, subunit 1 0.33 Echvi_3718 Coproporphyrinogen III oxidase
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS17815 cytochrome c oxidase subunit I 0.28 CA265_RS09350 coproporphyrinogen III oxidase

Not shown: 6 genomes with orthologs for TX73_004290 only; 30 genomes with orthologs for TX73_007780 only