| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS03405 | | epoxyqueuosine reductase | 1.0 | RR42_RS12295 | | ABC transporter permease | 0.34 | 3 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS12740 | | tRNA epoxyqueuosine(34) reductase QueG | 0.75 | RS_RS06700 | | sulfate ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS00775 | | tRNA epoxyqueuosine(34) reductase QueG | 0.78 | ABZR87_RS11490 | | sulfate ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS12175 | | tRNA epoxyqueuosine(34) reductase QueG | 0.76 | RPSI07_RS17445 | | sulfate ABC transporter substrate-binding protein | low | > 81 |
| Ralstonia solanacearum UW163 | 0.64 | UW163_RS08505 | | tRNA epoxyqueuosine(34) reductase QueG | 0.77 | UW163_RS13365 | | sulfate ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.64 | RALBFv3_RS05120 | | tRNA epoxyqueuosine(34) reductase QueG | 0.77 | RALBFv3_RS00035 | | sulfate ABC transporter substrate-binding protein | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS04220 | | epoxyqueuosine reductase | 0.75 | HSERO_RS08185 | | sulfate transporter subunit | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF5474 | | Epoxyqueuosine (oQ) reductase QueG | 0.62 | GFF5027 | | Sulfate and thiosulfate binding protein CysP | low | > 90 |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS02745 | | tRNA epoxyqueuosine(34) reductase QueG | 0.70 | QEN71_RS22590 | | sulfate ABC transporter substrate-binding protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS15960 | | iron-sulfur cluster binding protein | 0.71 | BPHYT_RS08790 | | ABC transporter permease | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_003363 | | epoxyqueuosine reductase | 0.71 | ABIE53_001990 | | sulfate/thiosulfate-binding protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_04128 | | epoxyqueuosine reductase | 0.71 | H281DRAFT_00778 | | sulfate transport system substrate-binding protein | low | > 103 |
| Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_306 | | Epoxyqueuosine (oQ) reductase QueG | 0.65 | Ac3H11_581 | | Sulfate and thiosulfate binding protein CysP | low | > 79 |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS20285 | | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | ABID97_RS15465 | | sulfate ABC transporter substrate-binding protein | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS13905 | | tRNA epoxyqueuosine(34) reductase QueG | 0.65 | ABCV34_RS03935 | | sulfate ABC transporter substrate-binding protein | low | > 48 |
| Lysobacter sp. OAE881 | 0.51 | ABIE51_RS08045 | | tRNA epoxyqueuosine(34) reductase QueG | 0.60 | ABIE51_RS01855 | | sulfate ABC transporter substrate-binding protein | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.2252.1 | | Epoxyqueuosine (oQ) reductase QueG | 0.60 | Xcc-8004.4087.1 | | Sulfate and thiosulfate binding protein CysP | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS00835 | | tRNA epoxyqueuosine(34) reductase QueG | 0.63 | ABZR86_RS02880 | | sulfate ABC transporter substrate-binding protein | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_03900 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | OKGIIK_10935 | | ABC transporter permease | low | > 52 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_09500 | | epoxyqueuosine reductase | 0.65 | OH686_11670 | | Sulfate and thiosulfate binding protein CysP | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0677 | | iron-sulfur cluster binding protein, putative | 0.65 | Psest_4060 | | sulfate/thiosulfate-binding protein | low | > 67 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_0566 | | 4Fe-4S cluster binding protein | 0.62 | Psyr_0084 | | extracellular solute-binding protein, family 1 | 0.36 | 65 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_0566 | | 4Fe-4S cluster binding protein | 0.62 | Psyr_0084 | | extracellular solute-binding protein, family 1 | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_3620 | | Epoxyqueuosine (oQ) reductase QueG | 0.63 | Pf6N2E2_4006 | | Sulfate and thiosulfate binding protein CysP | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_1418 | | Epoxyqueuosine (oQ) reductase QueG | 0.62 | Pf1N1B4_1727 | | Sulfate and thiosulfate binding protein CysP | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_160 | | Epoxyqueuosine (oQ) reductase QueG | 0.63 | PfGW456L13_486 | | Sulfate and thiosulfate binding protein CysP | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_08685 | | epoxyqueuosine reductase | 0.63 | AO356_10685 | | ABC transporter permease | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | 0.61 | PFLU_RS00945 | | sulfate ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | 0.61 | PFLU_RS00945 | | sulfate ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_13115 | | epoxyqueuosine reductase | 0.64 | AO353_11540 | | ABC transporter permease | low | > 101 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_02460 | | epoxyqueuosine reductase | 0.61 | PS417_00930 | | ABC transporter permease | low | > 88 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_05115 | | Epoxyqueuosine reductase | 0.63 | PFR28_04762 | | Sulfate-binding protein | low | > 88 |
| Escherichia coli BL21 | 0.47 | ECD_04033 | | epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis | 0.69 | ECD_03802 | | sulfate transporter subunit | low | > 61 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_06940 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.69 | BNILDI_05575 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 75 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_10515 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.69 | HEPCGN_12465 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 87 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_15870 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | KEDOAH_14340 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | — | — |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_10135 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | NIAGMN_11575 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | — | — |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_04550 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.69 | NOLOHH_05955 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 75 |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_12285 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | OKFHMN_13820 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 80 |
| Escherichia coli BW25113 | 0.47 | b4166 | yjeS | predicted Fe-S electron transport protein (NCBI) | 0.69 | b3917 | sbp | sulfate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_15925 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | JDDGAC_17445 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 86 |
| Escherichia fergusonii Becca | 0.47 | EFB2_04369 | | Epoxyqueuosine reductase | 0.69 | EFB2_04701 | | Sulfate-binding protein | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_03876 | | Epoxyqueuosine reductase | 0.69 | OHPLBJKB_04134 | | Sulfate-binding protein | low | > 73 |
| Pseudomonas putida KT2440 | 0.47 | PP_4900 | | epoxyqueuosine reductase | 0.60 | PP_5171 | | sulfate ABC transporter | low | > 96 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_02800 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.68 | MCAODC_04320 | sbp | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 87 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS24200 | | tRNA epoxyqueuosine(34) reductase QueG | 0.69 | ECOLIN_RS22565 | | sulfate/thiosulfate ABC transporter substrate-binding protein Sbp | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF819 | | Epoxyqueuosine (oQ) reductase QueG | 0.68 | GFF2284 | | Sulfate-binding protein Sbp | low | > 78 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS18575 | | tRNA epoxyqueuosine(34) reductase QueG | 0.64 | HGI48_RS15990 | | sulfate ABC transporter substrate-binding protein | low | > 71 |
| Klebsiella michiganensis M5al | 0.47 | BWI76_RS02505 | | tRNA epoxyqueuosine(34) reductase QueG | 0.67 | BWI76_RS27500 | | sulfate transporter subunit | low | > 92 |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS19710 | | tRNA epoxyqueuosine(34) reductase QueG | 0.64 | DZA65_RS17075 | | sulfate ABC transporter substrate-binding protein | low | > 75 |
| Serratia liquefaciens MT49 | 0.46 | IAI46_01595 | | tRNA epoxyqueuosine(34) reductase QueG | 0.65 | IAI46_24640 | | sulfate ABC transporter substrate-binding protein | low | > 86 |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_3363 | | epoxyqueuosine reductase | 0.69 | EX28DRAFT_4391 | | sulfate/thiosulfate-binding protein | low | > 76 |
| Dickeya dadantii 3937 | 0.46 | DDA3937_RS18645 | | tRNA epoxyqueuosine(34) reductase QueG | 0.64 | DDA3937_RS15850 | | sulfate ABC transporter substrate-binding protein | low | > 74 |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_00447 | | Epoxyqueuosine reductase | 0.68 | MPMX20_04551 | | Sulfate-binding protein | low | > 85 |
| Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | 0.46 | CSW01_02850 | | sulfate ABC transporter substrate-binding protein | low | > 62 |
| Pantoea sp. MT58 | 0.46 | IAI47_02560 | | tRNA epoxyqueuosine(34) reductase QueG | 0.66 | IAI47_00785 | | sulfate ABC transporter substrate-binding protein | low | > 76 |
| Rahnella sp. WP5 | 0.45 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | 0.63 | EX31_RS14305 | | sulfate ABC transporter substrate-binding protein | low | > 89 |
| Dechlorosoma suillum PS | 0.45 | Dsui_3502 | | iron-sulfur cluster binding protein, putative | 0.75 | Dsui_1525 | | sulfate/thiosulfate-binding protein | low | > 51 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS02555 | | tRNA epoxyqueuosine(34) reductase QueG | 0.65 | HER17_RS05670 | | sulfate ABC transporter substrate-binding protein | low | > 75 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | 0.45 | Shewana3_3189 | | sulfate ABC transporter, periplasmic sulfate-binding protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.44 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | 0.67 | SO4652 | sbp | sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) | low | > 76 |
| Marinobacter adhaerens HP15 | 0.43 | HP15_2505 | | iron-sulfur cluster binding protein | 0.46 | HP15_1344 | | thiosulfate transporter subunit | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.42 | MPMX26_01783 | | Epoxyqueuosine reductase | 0.65 | MPMX26_02166 | | Sulfate-binding protein | — | — |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A0279 | | 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) | 0.66 | Rru_A3400 | | Thiosulphate-binding protein (NCBI) | — | — |
| Sinorhizobium meliloti 1021 | 0.32 | SMc00406 | | 4Fe-4S ferredoxin | 0.63 | SM_b21133 | | sulfate ABC transporter substrate-binding protein | low | > 103 |
| Bosea sp. OAE506 | 0.32 | ABIE41_RS03135 | | tRNA epoxyqueuosine(34) reductase QueG | 0.65 | ABIE41_RS15360 | | sulfate ABC transporter substrate-binding protein | low | > 77 |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS01310 | | tRNA epoxyqueuosine(34) reductase QueG | 0.65 | ABIE40_RS24590 | | sulfate ABC transporter substrate-binding protein | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.31 | TX73_000215 | | tRNA epoxyqueuosine(34) reductase QueG | 0.71 | TX73_003875 | | sulfate ABC transporter substrate-binding protein | low | > 86 |
| Magnetospirillum magneticum AMB-1 | 0.31 | AMB_RS03995 | | tRNA epoxyqueuosine(34) reductase QueG | 0.61 | AMB_RS10125 | | sulfate ABC transporter substrate-binding protein | low | > 64 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_03753 | | iron-sulfur cluster-binding protein | 0.64 | CCNA_00288 | | ABC-type sulfate transport system, periplasmic component | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_03753 | | iron-sulfur cluster-binding protein | 0.64 | CCNA_00288 | | ABC-type sulfate transport system, periplasmic component | low | > 67 |
Not shown: 9 genomes with orthologs for RR42_RS03405 only; 7 genomes with orthologs for RR42_RS12295 only