Conservation of cofitness between RR42_RS15445 and RR42_RS02310 in Cupriavidus basilensis FW507-4G11

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS15445 7-cyano-7-deazaguanine synthase 1.0 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.61 1
Ralstonia sp. UNC404CL21Col 0.92 ABZR87_RS09000 7-cyano-7-deazaguanine synthase QueC 0.81 ABZR87_RS07355 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.65 14
Ralstonia solanacearum GMI1000 0.90 RS_RS03715 7-cyano-7-deazaguanine synthase 0.84 RS_RS02220 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.64 29
Ralstonia solanacearum UW163 0.90 UW163_RS00625 7-cyano-7-deazaguanine synthase QueC 0.83 UW163_RS02195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Ralstonia solanacearum IBSBF1503 0.90 RALBFv3_RS12940 7-cyano-7-deazaguanine synthase QueC 0.83 RALBFv3_RS11390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.59 7
Ralstonia solanacearum PSI07 0.90 RPSI07_RS20285 7-cyano-7-deazaguanine synthase QueC 0.84 RPSI07_RS21815 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 81
Lysobacter sp. OAE881 0.70 ABIE51_RS05105 7-cyano-7-deazaguanine synthase QueC 0.45 ABIE51_RS00515 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.56 4
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_1146 preQ(0) biosynthesis protein QueC 0.51 B158DRAFT_2159 7-cyano-7-deazaguanine reductase 0.71 4
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_18070 7-cyano-7-deazaguanine synthase 0.50 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.55 3
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_5546 Queuosine Biosynthesis QueC ATPase 0.49 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.57 4
Pseudomonas sp. RS175 0.68 PFR28_03403 7-cyano-7-deazaguanine synthase 0.49 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.35 4
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC 0.50 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.68 2
Pseudomonas simiae WCS417 0.68 PS417_22400 7-cyano-7-deazaguanine synthase 0.51 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.62 2
Pseudomonas fluorescens SBW25 0.68 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC 0.50 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas stutzeri RCH2 0.68 Psest_1506 queuosine biosynthesis protein QueC 0.51 Psest_2714 7-cyano-7-deazaguanine reductase 0.61 2
Pseudomonas sp. S08-1 0.67 OH686_19180 queuosine biosynthesis protein QueC 0.49 OH686_22700 queuine synthase low > 80
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_03535 7-cyano-7-deazaguanine synthase 0.50 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 101
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_628 Queuosine Biosynthesis QueC ATPase 0.49 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1419 preQ(0) biosynthesis protein QueC 0.51 Psyr_1907 GTP cyclohydrolase I — —
Pseudomonas putida KT2440 0.67 PP_1226 pre-queuosine 0 synthase 0.49 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.35 7
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1419 preQ(0) biosynthesis protein QueC 0.51 Psyr_1907 GTP cyclohydrolase I low > 86
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase 0.50 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.67 1
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.1450.1 Queuosine Biosynthesis QueC ATPase 0.47 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.35 36
Dechlorosoma suillum PS 0.66 Dsui_0549 queuosine biosynthesis protein QueC 0.56 Dsui_0505 7-cyano-7-deazaguanine reductase 0.68 2
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS10785 7-cyano-7-deazaguanine synthase QueC 0.59 ABZR86_RS16195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.90 2
Rhodanobacter denitrificans MT42 0.64 LRK55_RS04635 7-cyano-7-deazaguanine synthase QueC 0.55 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 63
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS04855 7-cyano-7-deazaguanine synthase QueC 0.55 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 59
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_01895 queC 7-cyano-7-deazaguanine synthase QueC 0.59 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 52
Acinetobacter radioresistens SK82 0.57 MPMX26_02175 7-cyano-7-deazaguanine synthase 0.38 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.92 2
Marinobacter adhaerens HP15 0.34 HP15_3814 ExsB protein 0.44 HP15_1463 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.68 2
Alteromonas macleodii MIT1002 0.33 MIT1002_01263 7-cyano-7-deazaguanine synthase 0.55 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.94 2
Shewanella amazonensis SB2B 0.30 Sama_1826 ExsB protein (RefSeq) 0.50 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 62
Pantoea sp. MT58 0.28 IAI47_14620 7-cyano-7-deazaguanine synthase QueC 0.51 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 76
Klebsiella michiganensis M5al 0.28 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC 0.49 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 92
Rahnella sp. WP5 0.28 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC 0.51 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 89
Escherichia coli ECOR38 0.28 HEPCGN_06910 queC 7-cyano-7-deazaguanine synthase QueC 0.49 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_03229 7-cyano-7-deazaguanine synthase 0.48 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Escherichia coli Nissle 1917 0.28 ECOLIN_RS02660 7-cyano-7-deazaguanine synthase QueC 0.49 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 55
Escherichia coli ECRC62 0.28 BNILDI_22645 queC 7-cyano-7-deazaguanine synthase QueC 0.49 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Escherichia coli ECOR27 0.28 NOLOHH_01230 queC 7-cyano-7-deazaguanine synthase QueC 0.49 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_06875 7-cyano-7-deazaguanine synthase QueC 0.52 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 62
Escherichia coli BW25113 0.28 b0444 ybaX predicted aluminum resistance protein (NCBI) 0.48 b2794 yqcD hypothetical protein (NCBI) 0.14 69
Escherichia fergusonii Becca 0.28 EFB2_03613 7-cyano-7-deazaguanine synthase 0.49 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF4360 Queuosine Biosynthesis QueC ATPase 0.49 GFF4849 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 78
Escherichia coli ECRC99 0.28 KEDOAH_19670 queC 7-cyano-7-deazaguanine synthase QueC 0.48 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECRC100 0.28 OKFHMN_08295 queC 7-cyano-7-deazaguanine synthase QueC 0.48 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 80
Escherichia coli ECRC102 0.28 NIAGMN_06350 queC 7-cyano-7-deazaguanine synthase QueC 0.48 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Dickeya dianthicola ME23 0.28 DZA65_RS06040 7-cyano-7-deazaguanine synthase QueC 0.49 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Serratia liquefaciens MT49 0.28 IAI46_05045 7-cyano-7-deazaguanine synthase QueC 0.49 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Enterobacter sp. TBS_079 0.28 MPMX20_01035 7-cyano-7-deazaguanine synthase 0.49 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 85
Escherichia coli ECRC101 0.28 MCAODC_27520 queC 7-cyano-7-deazaguanine synthase QueC 0.48 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 87
Escherichia coli ECRC98 0.28 JDDGAC_11950 queC 7-cyano-7-deazaguanine synthase QueC 0.48 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Escherichia coli BL21 0.28 ECD_00396 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis 0.48 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) low > 61
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2526 queuosine biosynthesis protein QueC 0.49 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase low > 76
Dickeya dianthicola 67-19 0.28 HGI48_RS05715 7-cyano-7-deazaguanine synthase QueC 0.50 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 71
Erwinia tracheiphila SCR3 0.27 LU632_RS18310 queC 7-cyano-7-deazaguanine synthase QueC 0.49 LU632_RS06280 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Pectobacterium carotovorum WPP14 0.27 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC 0.49 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Dickeya dadantii 3937 0.27 DDA3937_RS05670 7-cyano-7-deazaguanine synthase QueC 0.50 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Shewanella loihica PV-4 0.26 Shew_2062 exsB protein (RefSeq) 0.55 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) — —
Shewanella sp. ANA-3 0.26 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) 0.52 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.50 10
Shewanella oneidensis MR-1 0.25 SO2503 exsB exsB protein (NCBI ptt file) 0.52 SO1608 conserved hypothetical protein (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS01500 7-cyano-7-deazaguanine synthase 0.66 BPHYT_RS03135 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.90 2
Paraburkholderia graminis OAS925 0.23 ABIE53_000396 7-cyano-7-deazaguanine synthase 0.65 ABIE53_000759 7-cyano-7-deazaguanine reductase 0.88 1
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS00200 7-cyano-7-deazaguanine synthase QueC 0.64 QEN71_RS01975 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 153
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_02232 preQ(0) biosynthesis protein QueC 0.65 H281DRAFT_01889 7-cyano-7-deazaguanine reductase 0.85 3
Variovorax sp. SCN45 0.21 GFF5214 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.60 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) 0.73 6
Acidovorax sp. GW101-3H11 0.21 Ac3H11_4838 Queuosine Biosynthesis QueC ATPase 0.61 Ac3H11_1595 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.27 57
Castellaniella sp019104865 MT123 0.19 ABCV34_RS10950 7-cyano-7-deazaguanine synthase QueC 0.46 ABCV34_RS06920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 48
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS20880 7-cyano-7-deazaguanine synthase 0.61 HSERO_RS19515 7-cyano-7-deazaguanine reductase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF1402 Queuosine Biosynthesis QueC ATPase 0.58 GFF722 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 90

Not shown: 24 genomes with orthologs for RR42_RS15445 only; 1 genomes with orthologs for RR42_RS02310 only