Conservation of cofitness between QEN71_RS06015 and QEN71_RS29185 in Paraburkholderia sabiae LMG 24235

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS06015 protease modulator HflC 1.0 QEN71_RS29185 UvrD-helicase domain-containing protein 0.77 6
Paraburkholderia graminis OAS925 0.76 ABIE53_002734 membrane protease subunit HflC 0.91 ABIE53_000233 ATP-dependent DNA helicase Rep — —
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_00524 protease FtsH subunit HflC 0.91 H281DRAFT_02416 ATP-dependent DNA helicase Rep — —
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS12540 membrane protein 0.91 BPHYT_RS19305 ATP-dependent DNA helicase Rep — —
Ralstonia solanacearum GMI1000 0.47 RS_RS06125 protease modulator HflC 0.77 RS_RS16480 ATP-dependent DNA helicase Rep — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS10955 protease modulator HflC 0.77 ABZR87_RS03915 UvrD-helicase domain-containing protein low > 80
Ralstonia solanacearum PSI07 0.44 RPSI07_RS18060 protease modulator HflC 0.77 RPSI07_RS08600 ATP-dependent DNA helicase Rep low > 81
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS15315 protease modulator HflC 0.77 RALBFv3_RS08635 ATP-dependent DNA helicase Rep — —
Ralstonia solanacearum UW163 0.44 UW163_RS12780 protease modulator HflC 0.77 UW163_RS04975 ATP-dependent DNA helicase Rep — —
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS14760 membrane protein 0.63 HSERO_RS21590 ATP-dependent DNA helicase Rep low > 78
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13100 membrane protein 0.78 RR42_RS20055 ATP-dependent DNA helicase Rep — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_1802 HflC protein 0.42 Ac3H11_866 ATP-dependent DNA helicase Rep — —
Dechlorosoma suillum PS 0.37 Dsui_3134 membrane protease subunit, stomatin/prohibitin 0.55 Dsui_0933 DNA/RNA helicase, superfamily I — —
Variovorax sp. OAS795 0.36 ABID97_RS14265 protease modulator HflC 0.46 ABID97_RS05510 UvrD-helicase domain-containing protein — —
Variovorax sp. SCN45 0.35 GFF1003 HflC protein 0.46 GFF5842 ATP-dependent DNA helicase Rep — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS02665 protease modulator HflC 0.47 ABCV34_RS11065 UvrD-helicase domain-containing protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4855 HflC protein 0.45 GFF1778 ATP-dependent DNA helicase Rep low > 90
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_06645 hflC protease modulator HflC 0.37 OKGIIK_13085 rep ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_13160 membrane protease HflC 0.40 AO353_09120 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_151 HflC protein 0.40 PfGW456L13_819 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3611 HflC protein 0.40 Pf6N2E2_4398 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_1409 HflC protein 0.40 Pf1N1B4_2151 ATP-dependent DNA helicase Rep — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0575 protease FtsH subunit HflC 0.40 Psyr_0075 ATP-dependent DNA helicase Rep — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0575 protease FtsH subunit HflC 0.40 Psyr_0075 ATP-dependent DNA helicase Rep — —
Shewanella amazonensis SB2B 0.28 Sama_3022 hflC protein (RefSeq) 0.40 Sama_3266 ATP-dependent DNA helicase Rep (RefSeq) — —
Marinobacter adhaerens HP15 0.28 HP15_2496 HflC 0.41 HP15_214 DNA helicase, ATP-dependent, RepA type — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08640 membrane protease HflC 0.40 AO356_12655 ATP-dependent DNA helicase Rep — —
Pseudomonas sp. S08-1 0.28 OH686_09455 HflC protein 0.39 OH686_13715 ATP-dependent DNA helicase Rep — —
Alteromonas macleodii MIT1002 0.28 MIT1002_03785 Modulator of FtsH protease HflC 0.41 MIT1002_00071 ATP-dependent DNA helicase rep — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS02585 protease modulator HflC 0.40 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS02585 protease modulator HflC 0.40 PFLU_RS29345 DNA helicase Rep — —
Pantoea sp. MT58 0.27 IAI47_02605 protease modulator HflC 0.40 IAI47_18545 DNA helicase Rep — —
Pseudomonas sp. RS175 0.27 PFR28_05124 Modulator of FtsH protease HflC 0.40 PFR28_04392 ATP-dependent DNA helicase Rep — —
Shewanella sp. ANA-3 0.27 Shewana3_0600 HflC protein (RefSeq) 0.41 Shewana3_0374 ATP-dependent DNA helicase Rep (RefSeq) — —
Rhodanobacter denitrificans MT42 0.27 LRK55_RS00385 protease modulator HflC 0.36 LRK55_RS10435 UvrD-helicase domain-containing protein — —
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS00615 protease modulator HflC 0.36 LRK54_RS10795 UvrD-helicase domain-containing protein — —
Pseudomonas stutzeri RCH2 0.27 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs 0.39 Psest_3778 ATP-dependent DNA helicase Rep — —
Pseudomonas putida KT2440 0.27 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.40 PP_5264 helicase a single-stranded DNA dependent ATPase — —
Shewanella oneidensis MR-1 0.27 SO0606 hflC hflC protein (NCBI ptt file) 0.41 SO4325 rep ATP-dependent DNA helicase Rep (NCBI ptt file) — —
Shewanella loihica PV-4 0.26 Shew_0569 HflC protein (RefSeq) 0.41 Shew_0305 ATP-dependent DNA helicase Rep (RefSeq) — —
Enterobacter asburiae PDN3 0.26 EX28DRAFT_3372 HflC protein 0.41 EX28DRAFT_4449 ATP-dependent DNA helicase Rep (EC 3.6.1.-) — —
Pseudomonas simiae WCS417 0.26 PS417_02505 membane protease HflC 0.40 PS417_27670 ATP-dependent DNA helicase Rep — —
Lysobacter sp. OAE881 0.26 ABIE51_RS06555 protease modulator HflC 0.34 ABIE51_RS00370 UvrD-helicase domain-containing protein — —
Serratia liquefaciens MT49 0.26 IAI46_01640 protease modulator HflC 0.41 IAI46_00565 DNA helicase Rep — —
Erwinia tracheiphila SCR3 0.26 LU632_RS02070 hflC protease modulator HflC 0.40 LU632_RS24280 rep DNA helicase Rep — —
Escherichia coli ECOR27 0.25 NOLOHH_04505 hflC protease modulator HflC 0.40 NOLOHH_06745 rep DNA helicase Rep — —
Escherichia coli Nissle 1917 0.25 ECOLIN_RS24245 protease modulator HflC 0.40 ECOLIN_RS21690 DNA helicase Rep — —
Escherichia coli ECRC101 0.25 MCAODC_02755 hflC protease modulator HflC 0.40 MCAODC_05115 rep DNA helicase Rep — —
Enterobacter sp. TBS_079 0.25 MPMX20_00456 Modulator of FtsH protease HflC 0.41 MPMX20_04494 ATP-dependent DNA helicase Rep — —
Escherichia coli BW25113 0.25 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.40 b3778 rep DNA helicase and single-stranded DNA-dependent ATPase (NCBI) low > 76
Escherichia fergusonii Becca 0.25 EFB2_04360 Modulator of FtsH protease HflC 0.40 EFB2_04860 ATP-dependent DNA helicase Rep — —
Escherichia coli ECOR38 0.25 HEPCGN_10470 hflC protease modulator HflC 0.40 HEPCGN_13320 rep DNA helicase Rep low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.40 OHPLBJKB_04276 ATP-dependent DNA helicase Rep low > 73
Escherichia coli ECRC99 0.25 KEDOAH_15915 hflC protease modulator HflC 0.40 KEDOAH_13540 rep DNA helicase Rep — —
Escherichia coli ECRC98 0.25 JDDGAC_15880 hflC protease modulator HflC 0.40 JDDGAC_18230 rep DNA helicase Rep — —
Escherichia coli BL21 0.25 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.40 ECD_03656 DNA helicase and single-stranded DNA-dependent ATPase — —
Escherichia coli ECRC62 0.25 BNILDI_06985 hflC protease modulator HflC 0.40 BNILDI_04780 rep DNA helicase Rep low > 75
Escherichia coli ECRC102 0.25 NIAGMN_10090 hflC protease modulator HflC 0.40 NIAGMN_12365 rep DNA helicase Rep — —
Escherichia coli ECRC100 0.25 OKFHMN_12240 hflC protease modulator HflC 0.40 OKFHMN_14610 rep DNA helicase Rep — —
Pectobacterium carotovorum WPP14 0.25 HER17_RS02600 protease modulator HflC 0.40 HER17_RS01120 DNA helicase Rep — —
Klebsiella michiganensis M5al 0.25 BWI76_RS02550 protease modulator HflC 0.40 BWI76_RS01020 DNA helicase Rep — —
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS08350 protease modulator HflC 0.37 ABZR86_RS16790 UvrD-helicase domain-containing protein — —
Kangiella aquimarina DSM 16071 0.25 B158DRAFT_1955 HflC protein 0.40 B158DRAFT_0352 ATP-dependent DNA helicase Rep (EC 3.6.1.-) 0.48 36
Rahnella sp. WP5 0.25 EX31_RS08805 protease modulator HflC 0.40 EX31_RS15030 DNA helicase Rep — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF828 HflC protein 0.40 GFF2894 ATP-dependent DNA helicase Rep — —
Dickeya dianthicola ME23 0.24 DZA65_RS19665 protease modulator HflC 0.40 DZA65_RS21290 DNA helicase Rep — —
Dickeya dianthicola 67-19 0.24 HGI48_RS18530 protease modulator HflC 0.40 HGI48_RS20245 DNA helicase Rep — —
Dickeya dadantii 3937 0.24 DDA3937_RS18595 protease modulator HflC 0.41 DDA3937_RS20105 DNA helicase Rep — —
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01850 protease modulator HflC 0.41 CSW01_00865 DNA helicase Rep — —
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3954.1 HflC protein 0.34 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep — —

Not shown: 15 genomes with orthologs for QEN71_RS06015 only; 1 genomes with orthologs for QEN71_RS29185 only