| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS28940 | | RNA polymerase sigma factor FliA | 1.0 | QEN71_RS28900 | | flagellar basal-body rod protein FlgF | 0.94 | 8 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_000108 | | RNA polymerase sigma factor for flagellar operon FliA | 0.80 | ABIE53_000097 | | flagellar basal-body rod protein FlgF | 0.97 | 19 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.85 | H281DRAFT_05766 | | flagellar basal-body rod protein FlgF | 0.43 | 43 |
| Burkholderia phytofirmans PsJN | 0.96 | BPHYT_RS18925 | | RNA polymerase sigma70 | 0.84 | BPHYT_RS18875 | | flagellar basal body rod protein FlgF | 0.90 | 13 |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS17485 | | RNA polymerase sigma factor FliA | 0.45 | RALBFv3_RS21720 | | flagellar basal-body rod protein FlgF | low | > 76 |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS21665 | | RNA polymerase sigma factor FliA | 0.45 | UW163_RS17465 | | flagellar basal-body rod protein FlgF | — | — |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS18040 | | RNA polymerase sigma factor FliA | 0.41 | ABZR87_RS22270 | | flagellar basal-body rod protein FlgF | 0.95 | 11 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS23830 | | RNA polymerase sigma factor FliA | 0.44 | RS_RS18815 | | flagellar basal-body rod protein FlgF | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.61 | RPSI07_RS06165 | | RNA polymerase sigma factor FliA | 0.45 | RPSI07_RS01410 | | flagellar basal-body rod protein FlgF | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS35750 | | DNA-directed RNA polymerase sigma-70 factor | 0.57 | RR42_RS35705 | | flagellar basal body rod protein FlgF | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS10160 | | flagellar biosynthesis sigma factor | 0.51 | HSERO_RS10200 | | flagellar basal body rod protein FlgF | 0.94 | 1 |
| Variovorax sp. SCN45 | 0.59 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | 0.48 | GFF5719 | | Flagellar basal-body rod protein FlgF | — | — |
| Dechlorosoma suillum PS | 0.56 | Dsui_1726 | | RNA polymerase sigma factor, FliA/WhiG family | 0.47 | Dsui_2520 | | flagellar basal-body rod protein FlgF | low | > 51 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF1428 | | RNA polymerase sigma factor for flagellar operon | 0.43 | GFF1411 | | Flagellar basal-body rod protein FlgF | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_1381 | | RNA polymerase sigma factor for flagellar operon | 0.45 | Ac3H11_1373 | | Flagellar basal-body rod protein FlgF | low | > 79 |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS13785 | | RNA polymerase sigma factor FliA | 0.47 | LU632_RS10415 | | flagellar basal body rod protein FlgF | low | > 74 |
| Pantoea sp. MT58 | 0.51 | IAI47_08160 | | RNA polymerase sigma factor FliA | 0.44 | IAI47_12145 | | flagellar basal body rod protein FlgF | 0.83 | 18 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | 0.49 | NOLOHH_21185 | flgF | flagellar basal-body rod protein FlgF | low | > 75 |
| Escherichia coli BW25113 | 0.50 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | 0.49 | b1077 | flgF | flagellar component of cell-proximal portion of basal-body rod (NCBI) | 0.50 | 3 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | 0.49 | BNILDI_19345 | flgF | flagellar basal-body rod protein FlgF | low | > 75 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | 0.49 | NIAGMN_24175 | flgF | flagellar basal-body rod protein FlgF | — | — |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | 0.49 | ECOLIN_RS06235 | | flagellar basal-body rod protein FlgF | low | > 55 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | 0.49 | MCAODC_23015 | flgF | flagellar basal-body rod protein FlgF | 0.55 | 18 |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | 0.49 | OKFHMN_03655 | flgF | flagellar basal-body rod protein FlgF | 0.72 | 40 |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | 0.49 | KEDOAH_24100 | flgF | flagellar basal-body rod protein FlgF | — | — |
| Escherichia fergusonii Becca | 0.50 | EFB2_02023 | | RNA polymerase sigma factor FliA | 0.49 | EFB2_02897 | | Flagellar basal-body rod protein FlgF | 0.30 | 44 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | 0.49 | JDDGAC_07315 | flgF | flagellar basal-body rod protein FlgF | low | > 86 |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | 0.48 | HEPCGN_23835 | flgF | flagellar basal-body rod protein FlgF | low | > 87 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_15785 | | RNA polymerase sigma factor FliA | 0.48 | IAI46_15940 | | flagellar basal body rod protein FlgF | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | 0.49 | GFF3358 | | Flagellar basal-body rod protein FlgF | 0.79 | 37 |
| Rahnella sp. WP5 | 0.50 | EX31_RS09450 | | RNA polymerase sigma factor FliA | 0.44 | EX31_RS11295 | | flagellar basal body rod protein FlgF | 0.71 | 14 |
| Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | 0.48 | EX28DRAFT_1855 | | flagellar hook-basal body protein | 0.56 | 76 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_02847 | | RNA polymerase sigma factor FliA | 0.48 | MPMX20_01756 | | Flagellar basal-body rod protein FlgF | 0.86 | 21 |
| Dickeya dianthicola ME23 | 0.49 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | 0.48 | DZA65_RS13990 | | flagellar basal body rod protein FlgF | 0.98 | 18 |
| Dickeya dianthicola 67-19 | 0.49 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | 0.48 | HGI48_RS13505 | | flagellar basal body rod protein FlgF | 0.71 | 33 |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | 0.47 | DDA3937_RS13460 | | flagellar basal body rod protein FlgF | 0.97 | 11 |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS16865 | | RNA polymerase sigma factor FliA | 0.35 | ABIE51_RS16690 | | flagellar basal body rod protein FlgF | 0.93 | 6 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | 0.42 | Psest_2964 | | flagellar basal-body rod protein FlgF | 0.85 | 21 |
| Pseudomonas sp. S08-1 | 0.47 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | 0.40 | OH686_02955 | | Flagellar basal-body rod protein FlgF | 0.80 | 23 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.40 | PFLU_RS21860 | | flagellar basal body rod protein FlgF | 0.96 | 11 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.39 | PS417_19890 | | flagellar basal body rod protein FlgF | — | — |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.40 | PFLU_RS21860 | | flagellar basal body rod protein FlgF | 0.92 | 19 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.42 | Psyr_3476 | | Flagellar basal body rod protein:Protein of unknown function DUF1078 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.42 | Psyr_3476 | | Flagellar basal body rod protein:Protein of unknown function DUF1078 | 0.54 | 53 |
| Pseudomonas putida KT2440 | 0.46 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | 0.42 | PP_4386 | | flagellar basal-body rod protein FlgF | 0.89 | 13 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | 0.40 | PfGW456L13_4387 | | Flagellar basal-body rod protein FlgF | low | > 87 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | 0.39 | HP15_1471 | | flagellar basal-body rod FlgF | 0.89 | 8 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | 0.41 | Pf1N1B4_3568 | | Flagellar basal-body rod protein FlgF | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_03730 | | flagellar biosynthesis sigma factor | 0.39 | AO356_03930 | | flagellar biosynthesis protein FlgF | 0.86 | 25 |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.44 | Shewana3_1325 | flgF | flagellar basal body rod protein FlgF (RefSeq) | 0.94 | 8 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | 0.39 | Pf6N2E2_2628 | | Flagellar basal-body rod protein FlgF | 0.88 | 19 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_18785 | | flagellar biosynthesis sigma factor | 0.39 | AO353_18595 | | flagellar biosynthesis protein FlgF | 0.75 | 26 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS08355 | | RNA polymerase sigma factor FliA | 0.47 | HER17_RS08185 | | flagellar basal body rod protein FlgF | 0.95 | 3 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_00852 | | RNA polymerase sigma factor FliA | 0.40 | PFR28_00804 | | Flagellar basal-body rod protein FlgF | 0.89 | 17 |
| Shewanella oneidensis MR-1 | 0.45 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | 0.43 | SO3245 | flgF | flagellar basal-body rod protein FlgF (NCBI ptt file) | 0.89 | 6 |
| Shewanella loihica PV-4 | 0.45 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.42 | Shew_1349 | flgF | flagellar basal body rod protein FlgF (RefSeq) | 0.97 | 8 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | 0.46 | ABCV34_RS05750 | | flagellar basal-body rod protein FlgF | 0.78 | 6 |
| Shewanella amazonensis SB2B | 0.45 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.41 | Sama_2314 | flgF | flagellar basal body rod protein FlgF (RefSeq) | 0.99 | 6 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | 0.43 | OKGIIK_02670 | flgF | flagellar basal-body rod protein FlgF | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | 0.41 | ABZR86_RS20095 | | flagellar basal-body rod protein FlgF | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | 0.42 | LRK55_RS13165 | | flagellar basal-body rod protein FlgF | low | > 63 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_01103 | | Sigma-F factor | 0.39 | MIT1002_01043 | | Putative proximal rod protein | low | > 70 |
| Rhodanobacter denitrificans FW104-10B01 | 0.43 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | 0.42 | LRK54_RS13425 | | flagellar basal-body rod protein FlgF | 0.40 | 28 |
| Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_10335 | | RNA polymerase sigma factor FliA | 0.38 | CSW01_11205 | | flagellar basal-body rod protein FlgF | 0.82 | 46 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.41 | Xcc-8004.2832.1 | | RNA polymerase sigma factor for flagellar operon | 0.36 | Xcc-8004.2782.1 | | Flagellar basal-body rod protein FlgF | low | > 74 |
| Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | 0.33 | Ga0059261_2093 | | flagellar basal-body rod protein FlgF | 0.76 | 15 |
Not shown: 3 genomes with orthologs for QEN71_RS28940 only; 1 genomes with orthologs for QEN71_RS28900 only