| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS26595 | | YggS family pyridoxal phosphate-dependent enzyme | 1.0 | QEN71_RS04195 | | Lrp/AsnC ligand binding domain-containing protein | 0.49 | 13 |
| Paraburkholderia graminis OAS925 | 0.87 | ABIE53_000841 | | pyridoxal phosphate enzyme (YggS family) | 0.95 | ABIE53_003132 | | Lrp/AsnC family leucine-responsive transcriptional regulator | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.87 | H281DRAFT_04680 | | hypothetical protein | 0.95 | H281DRAFT_04288 | | transcriptional regulator, AsnC family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.85 | BPHYT_RS03495 | | hypothetical protein | 0.93 | BPHYT_RS14785 | | AsnC family transcriptional regulator | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.63 | ABZR87_RS01225 | | YggS family pyridoxal phosphate-dependent enzyme | 0.81 | ABZR87_RS09565 | | Lrp/AsnC ligand binding domain-containing protein | low | > 80 |
| Variovorax sp. SCN45 | 0.62 | GFF3744 | | Pyridoxal phosphate-containing protein YggS | 0.64 | GFF1774 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS18995 | | hypothetical protein | 0.83 | HSERO_RS08380 | | AsnC family transcriptional regulator | low | > 78 |
| Pseudomonas sp. S08-1 | 0.62 | OH686_10975 | | Pyridoxal phosphate-containing protein YggS | 0.71 | OH686_13680 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.61 | RR42_RS17355 | | hypothetical protein | 0.82 | RR42_RS04590 | | AsnC family transcriptional regulator | low | > 128 |
| Variovorax sp. OAS795 | 0.60 | ABID97_RS00250 | | YggS family pyridoxal phosphate-dependent enzyme | 0.63 | ABID97_RS22380 | | winged helix-turn-helix transcriptional regulator | — | — |
| Ralstonia solanacearum UW163 | 0.60 | UW163_RS08050 | | YggS family pyridoxal phosphate-dependent enzyme | 0.81 | UW163_RS15935 | | AsnC family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.60 | RALBFv3_RS05575 | | YggS family pyridoxal phosphate-dependent enzyme | 0.81 | RALBFv3_RS13875 | | AsnC family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.60 | RS_RS13435 | | YggS family pyridoxal phosphate-dependent enzyme | 0.79 | RS_RS04610 | | AsnC family transcriptional regulator | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.60 | RPSI07_RS11725 | | YggS family pyridoxal phosphate-dependent enzyme | 0.81 | RPSI07_RS19595 | | AsnC family transcriptional regulator | low | > 81 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_0477 | | Protein of unknown function UPF0001 | 0.69 | Psyr_0234 | | transcriptional regulator, AsnC family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_0477 | | Protein of unknown function UPF0001 | 0.69 | Psyr_0234 | | transcriptional regulator, AsnC family | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | 0.69 | PFLU_RS29385 | | AsnC family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | 0.69 | PFLU_RS29385 | | AsnC family transcriptional regulator | low | > 109 |
| Pseudomonas putida KT2440 | 0.58 | PP_5094 | | putative enzyme with PLP binding domain | 0.69 | PP_5271 | | DNA-binding transcriptional dual regulator, leucine-binding | low | > 96 |
| Pseudomonas simiae WCS417 | 0.58 | PS417_26725 | | hypothetical protein | 0.69 | PS417_27710 | | AsnC family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.57 | Pf1N1B4_2342 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.69 | Pf1N1B4_2143 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_13425 | | hypothetical protein | 0.68 | AO356_12615 | | AsnC family transcriptional regulator | low | > 104 |
| Shewanella loihica PV-4 | 0.57 | Shew_1137 | | alanine racemase domain-containing protein (RefSeq) | 0.59 | Shew_2025 | | leucine-responsive transcriptional regulator (RefSeq) | low | > 60 |
| Pectobacterium carotovorum WPP14 | 0.57 | HER17_RS03810 | | YggS family pyridoxal phosphate-dependent enzyme | 0.57 | HER17_RS12360 | | leucine-responsive transcriptional regulator Lrp | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1011 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.69 | PfGW456L13_811 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF3054 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.56 | GFF4893 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | low | > 78 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_0284 | | pyridoxal phosphate enzyme, YggS family | 0.67 | Psest_3794 | | Transcriptional regulators | low | > 67 |
| Pantoea sp. MT58 | 0.55 | IAI47_03595 | | YggS family pyridoxal phosphate-dependent enzyme | 0.56 | IAI47_12915 | | leucine-responsive transcriptional regulator Lrp | low | > 76 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS24100 | | YggS family pyridoxal phosphate enzyme | 0.56 | BWI76_RS09655 | | leucine-responsive regulatory protein | low | > 92 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS18435 | | YggS family pyridoxal phosphate-dependent enzyme | 0.57 | DZA65_RS09915 | | leucine-responsive transcriptional regulator Lrp | low | > 75 |
| Pseudomonas sp. RS175 | 0.55 | PFR28_04242 | | Pyridoxal phosphate homeostasis protein | 0.69 | PFR28_04400 | | Leucine-responsive regulatory protein | 0.32 | 14 |
| Dickeya dadantii 3937 | 0.55 | DDA3937_RS17300 | | YggS family pyridoxal phosphate-dependent enzyme | 0.57 | DDA3937_RS09590 | | leucine-responsive transcriptional regulator Lrp | low | > 74 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_2989 | | pyridoxal phosphate enzyme, YggS family | 0.56 | EX28DRAFT_2043 | | transcriptional regulator, AsnC family | low | > 76 |
| Shewanella oneidensis MR-1 | 0.54 | SO3352 | | conserved hypothetical protein TIGR00044 (NCBI ptt file) | 0.58 | SO2305 | lrp | leucine-responsive regulatory protein (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4601 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.68 | Pf6N2E2_4390 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | low | > 103 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS17345 | | YggS family pyridoxal phosphate-dependent enzyme | 0.57 | HGI48_RS09605 | | leucine-responsive transcriptional regulator Lrp | low | > 71 |
| Pseudomonas fluorescens FW300-N2E3 | 0.54 | AO353_08160 | | hypothetical protein | 0.69 | AO353_09160 | | AsnC family transcriptional regulator | low | > 101 |
| Escherichia fergusonii Becca | 0.54 | EFB2_00951 | | Pyridoxal phosphate homeostasis protein | 0.56 | EFB2_03172 | | Leucine-responsive regulatory protein | low | > 86 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_1194 | | hypothetical protein (RefSeq) | 0.58 | Shewana3_2049 | | leucine-responsive transcriptional regulator (RefSeq) | low | > 73 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_00765 | | Pyridoxal phosphate homeostasis protein | 0.56 | OHPLBJKB_02779 | | Leucine-responsive regulatory protein | 0.46 | 51 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS16415 | | pyridoxal phosphate homeostasis protein | 0.56 | ECOLIN_RS04730 | | leucine-responsive transcriptional regulator Lrp | low | > 55 |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_22885 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | JDDGAC_09385 | lrp | leucine-responsive transcriptional regulator Lrp | low | > 86 |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_19255 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | OKFHMN_05575 | lrp | leucine-responsive transcriptional regulator Lrp | low | > 80 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_11125 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | NOLOHH_22145 | lrp | leucine-responsive transcriptional regulator Lrp | low | > 75 |
| Escherichia coli BL21 | 0.54 | ECD_02781 | | UPF0001 family protein, PLP-binding | 0.56 | ECD_00893 | | leucine-responsive global transcriptional regulator | low | > 61 |
| Escherichia coli ECRC101 | 0.54 | MCAODC_09775 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | MCAODC_24965 | lrp | leucine-responsive transcriptional regulator Lrp | low | > 87 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_18560 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | HEPCGN_22935 | lrp | leucine-responsive transcriptional regulator Lrp | low | > 87 |
| Escherichia coli ECRC62 | 0.54 | BNILDI_09705 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | BNILDI_20400 | lrp | leucine-responsive transcriptional regulator Lrp | low | > 75 |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_17020 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | NIAGMN_03295 | lrp | leucine-responsive transcriptional regulator Lrp | — | — |
| Escherichia coli BW25113 | 0.54 | b2951 | yggS | predicted enzyme (NCBI) | 0.56 | b0889 | lrp | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | 0.26 | 14 |
| Rahnella sp. WP5 | 0.53 | EX31_RS02685 | | YggS family pyridoxal phosphate-dependent enzyme | 0.56 | EX31_RS18530 | | leucine-responsive transcriptional regulator Lrp | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_4474 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.52 | Ac3H11_2849 | | PutR, transcriptional activator of PutA and PutP | low | > 79 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_08885 | yggS | pyridoxal phosphate homeostasis protein | 0.56 | KEDOAH_22160 | lrp | leucine-responsive transcriptional regulator Lrp | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.53 | GFF2722 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.48 | GFF2725 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.52 | 32 |
| Erwinia tracheiphila SCR3 | 0.53 | LU632_RS05460 | | YggS family pyridoxal phosphate-dependent enzyme | 0.56 | LU632_RS09740 | lrp | leucine-responsive transcriptional regulator Lrp | 0.58 | 53 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_03809 | | Pyridoxal phosphate homeostasis protein | 0.56 | MPMX20_01551 | | Leucine-responsive regulatory protein | low | > 85 |
| Vibrio cholerae E7946 ATCC 55056 | 0.51 | CSW01_02455 | | YggS family pyridoxal phosphate enzyme | 0.57 | CSW01_09530 | | leucine-responsive transcriptional regulator Lrp | — | — |
| Marinobacter adhaerens HP15 | 0.51 | HP15_288 | | alanine racemase domain protein | 0.41 | HP15_2690 | | transcriptional regulator, AsnC family | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.50 | MIT1002_03061 | | pyridoxal phosphate enzyme, YggS family | 0.54 | MIT1002_02181 | | Leucine-responsive regulatory protein | low | > 70 |
| Shewanella amazonensis SB2B | 0.50 | Sama_2477 | | hypothetical protein (RefSeq) | 0.60 | Sama_1771 | | leucine-responsive transcriptional regulator (RefSeq) | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_02404 | | Pyridoxal phosphate homeostasis protein | 0.46 | MPMX26_01467 | | Leucine-responsive regulatory protein | low | > 36 |
| Serratia liquefaciens MT49 | 0.49 | IAI46_21410 | | YggS family pyridoxal phosphate-dependent enzyme | 0.56 | IAI46_08555 | | leucine-responsive transcriptional regulator Lrp | low | > 86 |
| Kangiella aquimarina DSM 16071 | 0.42 | B158DRAFT_0196 | | pyridoxal phosphate enzyme, YggS family | 0.59 | B158DRAFT_1822 | | Transcriptional regulators | low | > 40 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.1711.1 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.65 | Xcc-8004.4622.1 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS02955 | | YggS family pyridoxal phosphate-dependent enzyme | 0.67 | ABCV34_RS10805 | | winged helix-turn-helix transcriptional regulator | low | > 48 |
| Rhodanobacter denitrificans MT42 | 0.34 | LRK55_RS08955 | | YggS family pyridoxal phosphate-dependent enzyme | 0.66 | LRK55_RS00365 | | winged helix-turn-helix transcriptional regulator | low | > 63 |
| Agrobacterium fabrum C58 | 0.33 | Atu2747 | | hypothetical protein | 0.40 | Atu4159 | | AsnC family transcriptional regulator | low | > 89 |
| Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS02905 | | YggS family pyridoxal phosphate-dependent enzyme | 0.66 | LRK54_RS00595 | | winged helix-turn-helix transcriptional regulator | low | > 59 |
| Rhizobium sp. OAE497 | 0.31 | ABIE40_RS19180 | | YggS family pyridoxal phosphate-dependent enzyme | 0.36 | ABIE40_RS23450 | | Lrp/AsnC family transcriptional regulator | — | — |
| Bosea sp. OAE506 | 0.31 | ABIE41_RS04720 | | YggS family pyridoxal phosphate-dependent enzyme | 0.49 | ABIE41_RS07920 | | Lrp/AsnC ligand binding domain-containing protein | low | > 77 |
| Azospirillum brasilense Sp245 | 0.31 | AZOBR_RS01870 | | alanine racemase | 0.51 | AZOBR_RS23685 | | AsnC family transcriptional regulator | — | — |
| Rhodanobacter sp. FW510-T8 | 0.30 | OKGIIK_09885 | | Pyridoxal phosphate homeostasis protein | 0.65 | OKGIIK_06660 | lrp | AsnC family transcriptional regulator | low | > 52 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_00050 | | Pyridoxal phosphate homeostasis protein | 0.44 | MPMX19_03947 | | Leucine-responsive regulatory protein | low | > 112 |
| Sinorhizobium meliloti 1021 | 0.29 | SMc02812 | | hypothetical protein | 0.48 | SMc00681 | | leucine-responsive regulatory protein | low | > 103 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS13760 | | YggS family pyridoxal phosphate-dependent enzyme | 0.50 | A4249_RS13055 | | Lrp/AsnC ligand binding domain-containing protein | low | > 48 |
| Bacteroides stercoris CC31F | 0.28 | HMPREF1181_RS10865 | | YggS family pyridoxal phosphate-dependent enzyme | 0.26 | HMPREF1181_RS01345 | | Lrp/AsnC ligand binding domain-containing protein | low | > 56 |
| Caulobacter crescentus NA1000 Δfur | 0.27 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | 0.48 | CCNA_00847 | | leucine-responsive regulatory protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.27 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | 0.48 | CCNA_00847 | | leucine-responsive regulatory protein | low | > 66 |
Not shown: 24 genomes with orthologs for QEN71_RS26595 only; 0 genomes with orthologs for QEN71_RS04195 only