Conservation of cofitness between Psyr_4902 and Psyr_4133 in Pseudomonas syringae pv. syringae B728a

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4902 Protein of unknown function DUF495 1.0 Psyr_4133 histidinol dehydrogenase 0.40 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4902 Protein of unknown function DUF495 1.00 Psyr_4133 histidinol dehydrogenase low > 86
Pseudomonas putida KT2440 0.91 PP_0285 Fe(2+)-trafficking protein 0.88 PP_0966 Histidinol dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_12045 iron transporter 0.92 AO353_05110 histidinol dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.93 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.92 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) low > 87
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.92 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) low > 103
Pseudomonas sp. RS175 0.87 PFR28_04924 putative Fe(2+)-trafficking protein 0.92 PFR28_00187 Histidinol dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.85 PFLU_RS01585 oxidative damage protection protein 0.91 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS01585 oxidative damage protection protein 0.91 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_09835 iron transporter 0.92 AO356_06965 histidinol dehydrogenase low > 104
Pseudomonas simiae WCS417 0.85 PS417_01540 iron transporter 0.91 PS417_04420 histidinol dehydrogenase — —
Pseudomonas stutzeri RCH2 0.84 Psest_0144 Fe-S cluster protector protein 0.87 Psest_3298 histidinol dehydrogenase low > 67
Pseudomonas sp. S08-1 0.82 OH686_14545 Probable Fe(2+)-trafficking protein YggX 0.88 OH686_08470 Histidinol dehydrogenase low > 80
Marinobacter adhaerens HP15 0.60 HP15_3016 Ion traffic superfamily protein 0.70 HP15_2428 histidinol dehydrogenase 0.54 56
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_0206 Fe-S cluster protector protein 0.27 B158DRAFT_2293 histidinol dehydrogenase low > 40
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19970 oxidative damage protection protein 0.31 ABZR86_RS06730 histidinol dehydrogenase low > 74
Alteromonas macleodii MIT1002 0.51 MIT1002_00240 putative Fe(2+)-trafficking protein 0.31 MIT1002_02633 Histidinol dehydrogenase low > 70
Acinetobacter radioresistens SK82 0.51 MPMX26_00184 putative Fe(2+)-trafficking protein 0.57 MPMX26_02587 Histidinol dehydrogenase low > 36
Shewanella loihica PV-4 0.50 Shew_1122 hypothetical protein (RefSeq) 0.33 Shew_2198 histidinol dehydrogenase (RefSeq) low > 60
Lysobacter sp. OAE881 0.50 ABIE51_RS15145 oxidative damage protection protein 0.32 ABIE51_RS13325 histidinol dehydrogenase — —
Shewanella oneidensis MR-1 0.50 SO3369 conserved hypothetical protein (NCBI ptt file) 0.32 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.30 51
Shewanella sp. ANA-3 0.49 Shewana3_1180 hypothetical protein (RefSeq) 0.31 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) low > 73
Serratia liquefaciens MT49 0.49 IAI46_21470 oxidative damage protection protein 0.30 IAI46_08210 histidinol dehydrogenase low > 86
Shewanella amazonensis SB2B 0.49 Sama_2491 hypothetical protein (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13040 iron transporter 0.64 RR42_RS18915 histidinol dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS17325 iron transporter 0.63 HSERO_RS20345 histidinol dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02405 Fe(2+)-trafficking protein 0.33 CSW01_05750 histidinol dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00754 putative Fe(2+)-trafficking protein 0.32 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia coli ECRC100 0.48 OKFHMN_19195 yggX oxidative damage protection protein 0.32 OKFHMN_24515 hisD Histidinol dehydrogenase low > 80
Escherichia coli ECRC99 0.48 KEDOAH_08945 yggX oxidative damage protection protein 0.32 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Escherichia coli BL21 0.48 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.32 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase low > 61
Klebsiella michiganensis M5al 0.48 BWI76_RS24160 Fe(2+)-trafficking protein 0.31 BWI76_RS18925 histidinol dehydrogenase — —
Escherichia coli ECOR38 0.48 HEPCGN_18465 yggX oxidative damage protection protein 0.32 HEPCGN_03220 hisD Histidinol dehydrogenase low > 87
Escherichia coli BW25113 0.48 b2962 yggX hypothetical protein (NCBI) 0.32 b2020 hisD histidinol dehydrogenase (NCBI) low > 76
Escherichia fergusonii Becca 0.48 EFB2_00940 putative Fe(2+)-trafficking protein 0.32 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli ECOR27 0.48 NOLOHH_11055 yggX oxidative damage protection protein 0.32 NOLOHH_15830 hisD Histidinol dehydrogenase low > 75
Escherichia coli ECRC101 0.48 MCAODC_09715 yggX oxidative damage protection protein 0.32 MCAODC_20425 hisD Histidinol dehydrogenase low > 87
Dickeya dadantii 3937 0.48 DDA3937_RS04895 oxidative damage protection protein 0.33 DDA3937_RS09735 histidinol dehydrogenase low > 74
Escherichia coli ECRC98 0.48 JDDGAC_22825 yggX oxidative damage protection protein 0.32 JDDGAC_28625 hisD Histidinol dehydrogenase low > 86
Escherichia coli ECRC62 0.48 BNILDI_09640 yggX oxidative damage protection protein 0.32 BNILDI_14740 hisD Histidinol dehydrogenase low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.60 GFF1314 Histidinol dehydrogenase (EC 1.1.1.23) — —
Escherichia coli ECRC102 0.48 NIAGMN_16960 yggX oxidative damage protection protein 0.32 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02560 yggX oxidative damage protection protein 0.32 OKGIIK_04950 hisD histidinol dehydrogenase low > 52
Pectobacterium carotovorum WPP14 0.48 HER17_RS16630 oxidative damage protection protein 0.31 HER17_RS12230 histidinol dehydrogenase low > 75
Ralstonia solanacearum UW163 0.47 UW163_RS12845 oxidative damage protection protein 0.61 UW163_RS06770 histidinol dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS15385 oxidative damage protection protein 0.61 RALBFv3_RS06845 histidinol dehydrogenase — —
Ralstonia solanacearum GMI1000 0.47 RS_RS06190 Fe(2+)-trafficking protein 0.60 RS_RS14790 histidinol dehydrogenase — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS17970 Fe(2+)-trafficking protein 0.61 RPSI07_RS10390 histidinol dehydrogenase — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS16475 oxidative damage protection protein 0.32 ECOLIN_RS11945 histidinol dehydrogenase — —
Rahnella sp. WP5 0.47 EX31_RS02740 oxidative damage protection protein 0.32 EX31_RS11440 histidinol dehydrogenase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.32 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_03819 putative Fe(2+)-trafficking protein 0.31 MPMX20_03002 Histidinol dehydrogenase low > 85
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS05615 oxidative damage protection protein 0.61 QEN71_RS27865 histidinol dehydrogenase low > 153
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2999 Fe-S cluster protector protein 0.31 EX28DRAFT_0539 histidinol dehydrogenase low > 76
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13320 oxidative damage protection protein 0.32 LRK54_RS01605 histidinol dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13060 oxidative damage protection protein 0.32 LRK55_RS01385 histidinol dehydrogenase low > 63
Dickeya dianthicola 67-19 0.46 HGI48_RS04905 oxidative damage protection protein 0.32 HGI48_RS09745 histidinol dehydrogenase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS05240 oxidative damage protection protein 0.32 DZA65_RS10055 histidinol dehydrogenase low > 75
Pantoea sp. MT58 0.46 IAI47_03555 oxidative damage protection protein 0.30 IAI47_07090 histidinol dehydrogenase low > 76
Dechlorosoma suillum PS 0.46 Dsui_1571 Fe-S cluster protector protein 0.61 Dsui_1411 histidinol dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS11010 oxidative damage protection protein 0.61 ABZR87_RS02500 histidinol dehydrogenase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX 0.61 ABIE53_003701 histidinol dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX 0.61 H281DRAFT_05652 histidinol dehydrogenase — —
Erwinia tracheiphila SCR3 0.45 LU632_RS05415 oxidative damage protection protein 0.31 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Variovorax sp. OAS795 0.45 ABID97_RS15460 oxidative damage protection protein 0.61 ABID97_RS23160 histidinol dehydrogenase — —
Variovorax sp. SCN45 0.45 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.61 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23) — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.62 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23) — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS02400 oxidative damage protection protein 0.56 ABCV34_RS11230 histidinol dehydrogenase low > 48
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS12990 iron transporter 0.60 BPHYT_RS17710 histidinol dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.34 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) — —

Not shown: 0 genomes with orthologs for Psyr_4902 only; 31 genomes with orthologs for Psyr_4133 only