Conservation of cofitness between Psyr_4902 and Psyr_1669 in Pseudomonas syringae pv. syringae B728a

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4902 Protein of unknown function DUF495 1.0 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.39 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4902 Protein of unknown function DUF495 1.00 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas putida KT2440 0.91 PP_0285 Fe(2+)-trafficking protein 0.86 PP_2001 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_12045 iron transporter 0.93 AO353_20695 O-succinylhomoserine sulfhydrylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.36 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) low > 87
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.92 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 87
Pseudomonas sp. RS175 0.87 PFR28_04924 putative Fe(2+)-trafficking protein 0.92 PFR28_02810 O-succinylhomoserine sulfhydrylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.91 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 103
Pseudomonas fluorescens SBW25 0.85 PFLU_RS01585 oxidative damage protection protein 0.93 PFLU_RS20510 O-succinylhomoserine sulfhydrylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS01585 oxidative damage protection protein 0.93 PFLU_RS20510 O-succinylhomoserine sulfhydrylase low > 109
Pseudomonas simiae WCS417 0.85 PS417_01540 iron transporter 0.93 PS417_18530 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_09835 iron transporter 0.92 AO356_21470 O-succinylhomoserine sulfhydrylase low > 104
Pseudomonas stutzeri RCH2 0.84 Psest_0144 Fe-S cluster protector protein 0.84 Psest_2578 O-succinylhomoserine sulfhydrylase low > 67
Pseudomonas sp. S08-1 0.82 OH686_14545 Probable Fe(2+)-trafficking protein YggX 0.82 OH686_04415 O-succinylhomoserine sulfhydrylase low > 80
Marinobacter adhaerens HP15 0.60 HP15_3016 Ion traffic superfamily protein 0.61 HP15_1820 methionine gamma-lyase 0.55 42
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_0206 Fe-S cluster protector protein 0.40 B158DRAFT_1522 methionine gamma-lyase low > 40
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19970 oxidative damage protection protein 0.38 ABZR86_RS18745 PLP-dependent aspartate aminotransferase family protein — —
Alteromonas macleodii MIT1002 0.51 MIT1002_00240 putative Fe(2+)-trafficking protein 0.25 MIT1002_02266 Methionine gamma-lyase low > 70
Acinetobacter radioresistens SK82 0.51 MPMX26_00184 putative Fe(2+)-trafficking protein 0.66 MPMX26_01645 O-succinylhomoserine sulfhydrylase low > 36
Shewanella loihica PV-4 0.50 Shew_1122 hypothetical protein (RefSeq) 0.37 Shew_2491 methionine gamma-lyase (RefSeq) low > 60
Lysobacter sp. OAE881 0.50 ABIE51_RS15145 oxidative damage protection protein 0.39 ABIE51_RS04295 cystathionine gamma-synthase — —
Shewanella oneidensis MR-1 0.50 SO3369 conserved hypothetical protein (NCBI ptt file) 0.40 SO1812 mdeA Methionine gamma-lyase (EC 4.4.1.11) (from data) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_1180 hypothetical protein (RefSeq) 0.40 Shewana3_2643 methionine gamma-lyase (RefSeq) low > 73
Serratia liquefaciens MT49 0.49 IAI46_21470 oxidative damage protection protein 0.40 IAI46_03630 methionine gamma-lyase low > 86
Shewanella amazonensis SB2B 0.49 Sama_2491 hypothetical protein (RefSeq) 0.37 Sama_1242 methionine gamma-lyase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13040 iron transporter 0.54 RR42_RS14320 O-succinylhomoserine sulfhydrylase low > 128
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS17325 iron transporter 0.31 HSERO_RS18310 O-acetylhomoserine aminocarboxypropyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02405 Fe(2+)-trafficking protein 0.29 CSW01_13550 O-succinylhomoserine (thiol)-lyase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00754 putative Fe(2+)-trafficking protein 0.30 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli ECRC101 0.48 MCAODC_09715 yggX oxidative damage protection protein 0.30 MCAODC_04175 metB cystathionine gamma-synthase low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.52 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 90
Escherichia coli ECRC98 0.48 JDDGAC_22825 yggX oxidative damage protection protein 0.30 JDDGAC_17300 metB cystathionine gamma-synthase low > 86
Escherichia coli ECOR27 0.48 NOLOHH_11055 yggX oxidative damage protection protein 0.30 NOLOHH_05820 metB cystathionine gamma-synthase 0.69 43
Escherichia coli ECRC62 0.48 BNILDI_09640 yggX oxidative damage protection protein 0.30 BNILDI_05715 metB cystathionine gamma-synthase low > 75
Escherichia coli ECOR38 0.48 HEPCGN_18465 yggX oxidative damage protection protein 0.29 HEPCGN_12345 metB cystathionine gamma-synthase low > 87
Escherichia coli BL21 0.48 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.29 ECD_03825 cystathionine gamma-synthase, PLP-dependent low > 61
Dickeya dadantii 3937 0.48 DDA3937_RS04895 oxidative damage protection protein 0.30 DDA3937_RS00950 cystathionine gamma-synthase low > 74
Escherichia coli BW25113 0.48 b2962 yggX hypothetical protein (NCBI) 0.30 b3939 metB cystathionine gamma-synthase (NCBI) low > 76
Escherichia coli ECRC102 0.48 NIAGMN_16960 yggX oxidative damage protection protein 0.30 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia fergusonii Becca 0.48 EFB2_00940 putative Fe(2+)-trafficking protein 0.30 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli ECRC100 0.48 OKFHMN_19195 yggX oxidative damage protection protein 0.30 OKFHMN_13675 metB cystathionine gamma-synthase low > 80
Escherichia coli ECRC99 0.48 KEDOAH_08945 yggX oxidative damage protection protein 0.30 KEDOAH_14485 metB cystathionine gamma-synthase — —
Klebsiella michiganensis M5al 0.48 BWI76_RS24160 Fe(2+)-trafficking protein 0.31 BWI76_RS24210 cystathionine gamma-lyase — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS16630 oxidative damage protection protein 0.32 HER17_RS07405 PLP-dependent aspartate aminotransferase family protein low > 75
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02560 yggX oxidative damage protection protein 0.37 OKGIIK_01180 metC cystathionine beta-lyase low > 52
Ralstonia solanacearum GMI1000 0.47 RS_RS06190 Fe(2+)-trafficking protein 0.35 RS_RS07865 O-acetylhomoserine aminocarboxypropyltransferase — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS17970 Fe(2+)-trafficking protein 0.35 RPSI07_RS15620 O-acetylhomoserine aminocarboxypropyltransferase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS15385 oxidative damage protection protein 0.35 RALBFv3_RS01870 O-acetylhomoserine aminocarboxypropyltransferase — —
Ralstonia solanacearum UW163 0.47 UW163_RS12845 oxidative damage protection protein 0.35 UW163_RS15180 O-acetylhomoserine aminocarboxypropyltransferase — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS16475 oxidative damage protection protein 0.30 ECOLIN_RS22725 cystathionine gamma-synthase low > 55
Rahnella sp. WP5 0.47 EX31_RS02740 oxidative damage protection protein 0.36 EX31_RS04985 PLP-dependent transferase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.30 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_03819 putative Fe(2+)-trafficking protein 0.30 MPMX20_04531 Cystathionine gamma-synthase low > 85
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS05615 oxidative damage protection protein 0.53 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2999 Fe-S cluster protector protein 0.29 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) low > 76
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13060 oxidative damage protection protein 0.36 LRK55_RS05410 cystathionine gamma-synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13320 oxidative damage protection protein 0.36 LRK54_RS05660 PLP-dependent aspartate aminotransferase family protein low > 59
Dickeya dianthicola 67-19 0.46 HGI48_RS04905 oxidative damage protection protein 0.32 HGI48_RS15890 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS05240 oxidative damage protection protein 0.32 DZA65_RS16970 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 75
Pantoea sp. MT58 0.46 IAI47_03555 oxidative damage protection protein 0.29 IAI47_00880 cystathionine gamma-synthase low > 76
Dechlorosoma suillum PS 0.46 Dsui_1571 Fe-S cluster protector protein 0.57 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX 0.54 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX 0.54 ABIE53_004817 O-succinylhomoserine sulfhydrylase low > 113
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS11010 oxidative damage protection protein 0.36 ABZR87_RS13810 O-acetylhomoserine aminocarboxypropyltransferase low > 80
Erwinia tracheiphila SCR3 0.45 LU632_RS05415 oxidative damage protection protein 0.29 LU632_RS19640 metB cystathionine gamma-synthase low > 74
Variovorax sp. OAS795 0.45 ABID97_RS15460 oxidative damage protection protein 0.54 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Variovorax sp. SCN45 0.45 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.53 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.33 Ac3H11_34 Methionine gamma-lyase (EC 4.4.1.11) — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS02400 oxidative damage protection protein 0.35 ABCV34_RS10165 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 48
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS12990 iron transporter 0.53 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.37 Xcc-8004.4517.1 Cystathionine gamma-lyase (EC 4.4.1.1) — —

Not shown: 0 genomes with orthologs for Psyr_4902 only; 29 genomes with orthologs for Psyr_1669 only