| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3238 | | 3-oxoacid CoA-transferase | 1.0 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | 0.61 | 5 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3238 | | 3-oxoacid CoA-transferase | 1.00 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Pseudomonas sp. SVBP6 | 0.93 | COO64_RS07680 | | CoA transferase subunit B | 0.81 | COO64_RS19495 | ppc | phosphoenolpyruvate carboxylase | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_5834 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | 0.84 | Pf1N1B4_3051 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.28 | 47 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_01324 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.84 | PFR28_00368 | | Phosphoenolpyruvate carboxylase | low | > 88 |
| Pseudomonas sp. DMC3 | 0.93 | GFF996 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.83 | GFF2023 | | Phosphoenolpyruvate carboxylase | low | > 89 |
| Pseudomonas sp. BP01 | 0.93 | JOY50_RS21480 | | CoA transferase subunit B | 0.78 | JOY50_RS26030 | ppc | phosphoenolpyruvate carboxylase | low | > 84 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_21645 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.84 | AO356_06185 | | phosphoenolpyruvate carboxylase | low | > 104 |
| Pseudomonas putida KT2440 | 0.92 | PP_3123 | | acetoacetyl CoA-transferase (subunit B) | 0.79 | PP_1505 | | Phosphoenolpyruvate carboxylase | 0.20 | 29 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_2112 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) | 0.83 | Pf6N2E2_3103 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 103 |
| Pseudomonas segetis P6 | 0.92 | MPMX49_02806 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.79 | MPMX49_01618 | | Phosphoenolpyruvate carboxylase | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_27940 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.84 | AO353_16310 | | phosphoenolpyruvate carboxylase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.91 | PS417_10520 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.84 | PS417_06060 | | phosphoenolpyruvate carboxylase | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.91 | IKLFDK_09775 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.76 | IKLFDK_18825 | | phosphoenolpyruvate carboxylase | low | > 100 |
| Pseudomonas lactucae CFBP13502 | 0.91 | GEMAOFIL_02198 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.84 | GEMAOFIL_01382 | | Phosphoenolpyruvate carboxylase | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS10580 | | CoA transferase subunit B | 0.85 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS10580 | | CoA transferase subunit B | 0.85 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | low | > 109 |
| Enterobacter asburiae PDN3 | 0.86 | EX28DRAFT_1709 | | 3-oxoacid CoA-transferase, B subunit | 0.52 | EX28DRAFT_4418 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | low | > 76 |
| Escherichia coli ECRC62 | 0.86 | BNILDI_17480 | atoA | succinyl-CoA--3-ketoacid-CoA transferase | 0.53 | BNILDI_05785 | ppc | phosphoenolpyruvate carboxylase | low | > 75 |
| Escherichia coli ECOR27 | 0.85 | NOLOHH_18995 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.53 | NOLOHH_05740 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Enterobacter sp. TBS_079 | 0.85 | MPMX20_01911 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.52 | MPMX20_04524 | | Phosphoenolpyruvate carboxylase | low | > 85 |
| Shewanella amazonensis SB2B | 0.84 | Sama_1356 | | 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B (from data) | 0.53 | Sama_0254 | | phosphoenolpyruvate carboxylase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.83 | Shew_2576 | | 3-oxoacid CoA-transferase, B subunit (RefSeq) | 0.52 | Shew_0200 | | phosphoenolpyruvate carboxylase (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.83 | SO1891 | | 3-oxoadipate CoA-succinyl transferase, beta subunit (NCBI ptt file) | 0.54 | SO0274 | ppc | phosphoenolpyruvate carboxylase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.82 | Shewana3_1666 | | butyryl-CoA:acetate CoA transferase (RefSeq) | 0.53 | Shewana3_3906 | | phosphoenolpyruvate carboxylase (RefSeq) | low | > 73 |
| Klebsiella pneumoniae MKP103 | 0.81 | KDGMDA_23730 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.53 | KDGMDA_09355 | | phosphoenolpyruvate carboxylase | low | > 95 |
| Alteromonas macleodii MIT1002 | 0.79 | MIT1002_02000 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.49 | MIT1002_03491 | | Phosphoenolpyruvate carboxylase | low | > 70 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.70 | Echvi_3271 | | 3-oxoacid CoA-transferase, B subunit | 0.12 | Echvi_3727 | | Phosphoenolpyruvate carboxylase | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.69 | CA264_04620 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.12 | CA264_05530 | | phosphoenolpyruvate carboxylase | low | > 74 |
| Cellulophaga baltica 18 | 0.66 | M666_RS05230 | | 3-oxoacid CoA-transferase subunit B | 0.10 | M666_RS09030 | | phosphoenolpyruvate carboxylase | low | > 67 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.65 | CA265_RS06310 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.12 | CA265_RS21350 | | phosphoenolpyruvate carboxylase | 0.29 | 62 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.64 | ABZR88_RS05195 | | 3-oxoacid CoA-transferase subunit B | 0.11 | ABZR88_RS09465 | | phosphoenolpyruvate carboxylase | — | — |
| Acinetobacter radioresistens SK82 | 0.63 | MPMX26_02381 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.52 | MPMX26_03013 | | Phosphoenolpyruvate carboxylase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.62 | Xcc-8004.4477.1 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | 0.25 | Xcc-8004.4314.1 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS13670 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.23 | BPHYT_RS05225 | | phosphoenolpyruvate carboxylase | — | — |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS04385 | | CoA transferase subunit B | 0.23 | ABIE51_RS18965 | | phosphoenolpyruvate carboxylase | low | > 62 |
| Paraburkholderia graminis OAS925 | 0.61 | ABIE53_002908 | | 3-oxoacid CoA-transferase subunit B | 0.24 | ABIE53_001314 | | phosphoenolpyruvate carboxylase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_04496 | | 3-oxoacid CoA-transferase subunit B | 0.24 | H281DRAFT_00197 | | Phosphoenolpyruvate carboxylase, type 1 | — | — |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_02489 | | acetate/3-ketoacid CoA transferase, subunit B | 0.20 | CCNA_01560 | | phosphoenolpyruvate carboxylase | low | > 66 |
| Castellaniella sp019104865 MT123 | 0.60 | ABCV34_RS00775 | | 3-oxoacid CoA-transferase subunit B | 0.22 | ABCV34_RS14805 | | phosphoenolpyruvate carboxylase | low | > 48 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_02489 | | acetate/3-ketoacid CoA transferase, subunit B | 0.20 | CCNA_01560 | | phosphoenolpyruvate carboxylase | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS07910 | | CoA transferase subunit B | 0.24 | RS_RS11840 | | phosphoenolpyruvate carboxylase | — | — |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS15665 | | CoA transferase subunit B | 0.24 | RPSI07_RS13100 | | phosphoenolpyruvate carboxylase | — | — |
| Acinetobacter baumannii LAC-4 | 0.59 | RR41_RS12910 | | 3-oxoacid CoA-transferase subunit B | 0.51 | RR41_RS00155 | | phosphoenolpyruvate carboxylase | low | > 55 |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_1077 | | acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) | 0.74 | Psest_1557 | | Phosphoenolpyruvate carboxylase | 0.26 | 30 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS06560 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.24 | RR42_RS15905 | | phosphoenolpyruvate carboxylase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS01825 | | CoA transferase subunit B | 0.24 | RALBFv3_RS04250 | | phosphoenolpyruvate carboxylase | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS15135 | | CoA transferase subunit B | 0.24 | UW163_RS09420 | | phosphoenolpyruvate carboxylase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS05250 | | CoA transferase subunit B | 0.23 | QEN71_RS24955 | | phosphoenolpyruvate carboxylase | 0.45 | 76 |
| Xanthobacter sp. DMC5 | 0.58 | GFF1727 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B | 0.25 | GFF2267 | | Phosphoenolpyruvate carboxylase | — | — |
| Sphingobium sp. HT1-2 | 0.58 | GFF352 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | 0.22 | GFF5056 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 95 |
| Sphingomonas koreensis DSMZ 15582 | 0.57 | Ga0059261_0263 | | 3-oxoacid CoA-transferase, B subunit | 0.22 | Ga0059261_2719 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | low | > 68 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS19435 | | 3-oxoacid CoA-transferase subunit B | 0.23 | ABID97_RS08220 | | phosphoenolpyruvate carboxylase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS13765 | | CoA transferase subunit B | 0.24 | ABZR87_RS16140 | | phosphoenolpyruvate carboxylase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.55 | A4249_RS02955 | | 3-oxoacid CoA-transferase subunit B | 0.22 | A4249_RS12510 | | phosphoenolpyruvate carboxylase | low | > 48 |
| Rhodopseudomonas palustris CGA009 | 0.55 | TX73_021540 | | 3-oxoacid CoA-transferase subunit B | 0.25 | TX73_009115 | | phosphoenolpyruvate carboxylase | low | > 86 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_131 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | 0.24 | Ac3H11_3553 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | — | — |
| Variovorax sp. SCN45 | 0.54 | GFF7372 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | 0.23 | GFF3838 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS23185 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.22 | HSERO_RS14670 | | phosphoenolpyruvate carboxylase | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF5196 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) | 0.25 | GFF115 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | — | — |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS03850 | | 3-oxoacid CoA-transferase subunit B | 0.24 | LRK55_RS11810 | | phosphoenolpyruvate carboxylase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS04080 | | 3-oxoacid CoA-transferase subunit B | 0.24 | LRK54_RS12075 | | phosphoenolpyruvate carboxylase | low | > 59 |
| Rhodanobacter sp000427505 FW510-R12 | 0.52 | LRK53_RS05845 | | 3-oxoacid CoA-transferase subunit B | 0.25 | LRK53_RS16490 | | phosphoenolpyruvate carboxylase | low | > 59 |
| Azospirillum sp. SherDot2 | 0.48 | MPMX19_05364 | | Acetate CoA-transferase subunit beta | 0.25 | MPMX19_06050 | | Phosphoenolpyruvate carboxylase | 0.60 | 64 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_01488 | | Acetate CoA-transferase subunit beta | 0.53 | OHPLBJKB_04094 | | Phosphoenolpyruvate carboxylase | low | > 74 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS12975 | | acetate CoA-transferase subunit beta | 0.53 | ECOLIN_RS22835 | | phosphoenolpyruvate carboxylase | low | > 55 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_22420 | atoA | acetate CoA-transferase subunit beta | 0.53 | HEPCGN_12240 | ppc | phosphoenolpyruvate carboxylase | low | > 88 |
| Escherichia fergusonii Becca | 0.47 | EFB2_01633 | | Acetate CoA-transferase subunit beta | 0.53 | EFB2_04658 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Escherichia coli BL21 | 0.47 | ECD_02149 | | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit | 0.53 | ECD_03841 | | phosphoenolpyruvate carboxylase | low | > 61 |
| Escherichia coli BW25113 | 0.47 | b2222 | atoA | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (NCBI) | 0.53 | b3956 | ppc | phosphoenolpyruvate carboxylase (NCBI) | low | > 76 |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS16140 | | 3-oxoadipate CoA-transferase | 0.52 | BWI76_RS00835 | | phosphoenolpyruvate carboxylase | low | > 92 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_16160 | | CoA transferase subunit B | 0.53 | IAI46_24525 | | phosphoenolpyruvate carboxylase | low | > 86 |
Not shown: 9 genomes with orthologs for Psyr_3238 only; 27 genomes with orthologs for Psyr_1318 only