Conservation of cofitness between Psyr_4573 and Psyr_0544 in Pseudomonas syringae pv. syringae B728a

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4573 Histidine triad (HIT) protein 1.0 Psyr_0544 hydroxymethylpyrimidine synthase 0.54 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4573 Histidine triad (HIT) protein 1.00 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas sp. RS175 0.99 PFR28_04038 Purine nucleoside phosphoramidase 0.95 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_4831 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_14465 zinc-binding protein 0.95 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2554 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_07180 zinc-binding protein 0.94 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens SBW25 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1228 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas putida KT2440 0.88 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase 0.91 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pseudomonas simiae WCS417 0.88 PS417_25685 zinc-binding protein 0.96 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas stutzeri RCH2 0.78 Psest_3643 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.90 Psest_0477 thiamine biosynthesis protein ThiC low > 67
Pseudomonas sp. S08-1 0.78 OH686_15165 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) 0.90 OH686_15885 phosphomethylpyrimidine synthase low > 80
Marinobacter adhaerens HP15 0.65 HP15_3384 HIT (histidine triad) family protein 0.81 HP15_453 thiamine biosynthesis protein thiC low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_00744 HIT-like protein 0.68 MIT1002_00097 Phosphomethylpyrimidine synthase low > 70
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_05660 hinT histidine triad nucleotide-binding protein 0.75 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC low > 52
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS06230 histidine triad nucleotide-binding protein 0.76 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC low > 74
Lysobacter sp. OAE881 0.51 ABIE51_RS14005 histidine triad nucleotide-binding protein 0.75 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.51 23
Serratia liquefaciens MT49 0.49 IAI46_09880 purine nucleoside phosphoramidase 0.70 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_09495 histidine triad nucleotide-binding protein 0.69 CSW01_00335 phosphomethylpyrimidine synthase low > 62
Shewanella loihica PV-4 0.49 Shew_1731 histidine triad (HIT) protein (RefSeq) 0.72 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) low > 60
Shewanella sp. ANA-3 0.49 Shewana3_2507 histidine triad (HIT) protein (RefSeq) 0.69 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.49 SO2723 HIT family protein (NCBI ptt file) 0.70 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.49 Sama_1448 HIT family protein (RefSeq) 0.71 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) low > 62
Klebsiella michiganensis M5al 0.48 BWI76_RS11145 histidine triad nucleotide-binding protein 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS08705 purine nucleoside phosphoramidase 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Variovorax sp. OAS795 0.47 ABID97_RS23085 histidine triad nucleotide-binding protein 0.67 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Dickeya dianthicola 67-19 0.47 HGI48_RS13135 purine nucleoside phosphoramidase 0.71 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC low > 71
Dickeya dadantii 3937 0.47 DDA3937_RS13070 purine nucleoside phosphoramidase 0.73 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC low > 74
Variovorax sp. SCN45 0.47 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.68 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Dickeya dianthicola ME23 0.47 DZA65_RS13605 purine nucleoside phosphoramidase 0.70 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC low > 75
Rahnella sp. WP5 0.47 EX31_RS24480 purine nucleoside phosphoramidase 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0741 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.71 B158DRAFT_0295 hydroxymethylpyrimidine synthase low > 40
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4739 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.67 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 79
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1827 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Pantoea sp. MT58 0.46 IAI47_12015 purine nucleoside phosphoramidase 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Escherichia coli ECRC98 0.45 JDDGAC_07185 hinT purine nucleoside phosphoramidase 0.72 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli BW25113 0.45 b1103 ycfF orf, hypothetical protein (VIMSS) 0.72 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia coli ECRC99 0.45 KEDOAH_24230 hinT purine nucleoside phosphoramidase 0.72 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC62 0.45 BNILDI_19215 hinT purine nucleoside phosphoramidase 0.72 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli BL21 0.45 ECD_01099 purine nucleoside phosphoramidase, dadA activator protein 0.71 ECD_03871 phosphomethylpyrimidine synthase — —
Escherichia coli ECOR27 0.45 NOLOHH_21055 hinT purine nucleoside phosphoramidase 0.72 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli ECRC102 0.45 NIAGMN_24305 hinT purine nucleoside phosphoramidase 0.72 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECOR38 0.45 HEPCGN_23960 hinT purine nucleoside phosphoramidase 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC101 0.45 MCAODC_22885 hinT purine nucleoside phosphoramidase 0.72 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC100 0.45 OKFHMN_03525 hinT purine nucleoside phosphoramidase 0.72 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3386 YcfF/hinT protein: a purine nucleoside phosphoramidase 0.71 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Escherichia fergusonii Becca 0.45 EFB2_02872 Purine nucleoside phosphoramidase 0.72 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02563 Purine nucleoside phosphoramidase 0.72 OHPLBJKB_04056 Phosphomethylpyrimidine synthase — —
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS18865 hydrolase 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Enterobacter sp. TBS_079 0.45 MPMX20_01784 Purine nucleoside phosphoramidase 0.71 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Escherichia coli Nissle 1917 0.44 ECOLIN_RS06370 purine nucleoside phosphoramidase 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.4011.1 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.74 Xcc-8004.1066.1 hypothetical protein low > 74
Erwinia tracheiphila SCR3 0.44 LU632_RS14775 hinT purine nucleoside phosphoramidase 0.71 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC low > 74
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS20300 HIT family hydrolase 0.76 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF1304 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 90
Dechlorosoma suillum PS 0.43 Dsui_1421 HIT family hydrolase, diadenosine tetraphosphate hydrolase 0.76 Dsui_0422 thiamine biosynthesis protein ThiC — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS27815 histidine triad nucleotide-binding protein 0.75 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC low > 153
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05663 histidine triad (HIT) family protein 0.75 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Paraburkholderia graminis OAS925 0.41 ABIE53_003691 histidine triad (HIT) family protein 0.75 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Castellaniella sp019104865 MT123 0.41 ABCV34_RS11265 histidine triad nucleotide-binding protein 0.75 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17660 HIT family hydrolase 0.75 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Rhodospirillum rubrum S1H 0.39 Rru_A3592 Histidine triad (HIT) protein (NCBI) 0.60 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) — —
Magnetospirillum magneticum AMB-1 0.36 AMB_RS22915 histidine triad nucleotide-binding protein 0.67 AMB_RS01125 phosphomethylpyrimidine synthase — —
Dinoroseobacter shibae DFL-12 0.35 Dshi_0679 histidine triad (HIT) protein (RefSeq) 0.64 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS01695 hypothetical protein 0.65 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.33 44
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1052 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.62 Ga0059261_2424 hydroxymethylpyrimidine synthase low > 68
Azospirillum sp. SherDot2 0.32 MPMX19_02540 Purine nucleoside phosphoramidase 0.63 MPMX19_00336 Phosphomethylpyrimidine synthase low > 112
Phaeobacter inhibens DSM 17395 0.31 PGA1_c06720 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.64 PGA1_c09110 thiamine biosynthesis protein ThiC low > 62

Not shown: 8 genomes with orthologs for Psyr_4573 only; 24 genomes with orthologs for Psyr_0544 only