Conservation of cofitness between Psyr_4902 and Psyr_0469 in Pseudomonas syringae pv. syringae B728a

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4902 Protein of unknown function DUF495 1.0 Psyr_0469 dihydroxyacid dehydratase 0.40 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4902 Protein of unknown function DUF495 1.00 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas putida KT2440 0.91 PP_0285 Fe(2+)-trafficking protein 0.94 PP_5128 Dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_12045 iron transporter 0.95 AO353_08345 dihydroxy-acid dehydratase low > 101
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.95 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.94 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas sp. RS175 0.87 PFR28_04924 putative Fe(2+)-trafficking protein 0.95 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.95 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS01585 oxidative damage protection protein 0.95 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens SBW25 0.85 PFLU_RS01585 oxidative damage protection protein 0.95 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_09835 iron transporter 0.94 AO356_13250 dihydroxy-acid dehydratase low > 104
Pseudomonas simiae WCS417 0.85 PS417_01540 iron transporter 0.95 PS417_26890 dihydroxy-acid dehydratase — —
Pseudomonas stutzeri RCH2 0.84 Psest_0144 Fe-S cluster protector protein 0.93 Psest_0234 dihydroxy-acid dehydratase — —
Pseudomonas sp. S08-1 0.82 OH686_14545 Probable Fe(2+)-trafficking protein YggX 0.92 OH686_14100 dihydroxy-acid dehydratase 0.53 4
Marinobacter adhaerens HP15 0.60 HP15_3016 Ion traffic superfamily protein 0.78 HP15_595 dihydroxy-acid dehydratase 0.52 64
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19970 oxidative damage protection protein 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase low > 74
Alteromonas macleodii MIT1002 0.51 MIT1002_00240 putative Fe(2+)-trafficking protein 0.76 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Acinetobacter radioresistens SK82 0.51 MPMX26_00184 putative Fe(2+)-trafficking protein 0.29 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Shewanella loihica PV-4 0.50 Shew_1122 hypothetical protein (RefSeq) 0.73 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.46 40
Lysobacter sp. OAE881 0.50 ABIE51_RS15145 oxidative damage protection protein 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase — —
Shewanella oneidensis MR-1 0.50 SO3369 conserved hypothetical protein (NCBI ptt file) 0.74 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.29 64
Shewanella sp. ANA-3 0.49 Shewana3_1180 hypothetical protein (RefSeq) 0.74 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.58 60
Serratia liquefaciens MT49 0.49 IAI46_21470 oxidative damage protection protein 0.71 IAI46_24345 dihydroxy-acid dehydratase low > 86
Shewanella amazonensis SB2B 0.49 Sama_2491 hypothetical protein (RefSeq) 0.73 Sama_3279 dihydroxy-acid dehydratase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13040 iron transporter 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02405 Fe(2+)-trafficking protein 0.75 CSW01_00140 dihydroxy-acid dehydratase — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS17325 iron transporter 0.72 HSERO_RS02650 dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 0.48 NIAGMN_16960 yggX oxidative damage protection protein 0.74 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 0.48 EFB2_00940 putative Fe(2+)-trafficking protein 0.74 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC62 0.48 BNILDI_09640 yggX oxidative damage protection protein 0.74 BNILDI_04750 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC98 0.48 JDDGAC_22825 yggX oxidative damage protection protein 0.74 JDDGAC_18260 ilvD dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC99 0.48 KEDOAH_08945 yggX oxidative damage protection protein 0.74 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECOR27 0.48 NOLOHH_11055 yggX oxidative damage protection protein 0.74 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.69 41
Escherichia coli BW25113 0.48 b2962 yggX hypothetical protein (NCBI) 0.74 b3771 ilvD dihydroxy-acid dehydratase (NCBI) low > 76
Klebsiella michiganensis M5al 0.48 BWI76_RS24160 Fe(2+)-trafficking protein 0.74 BWI76_RS00975 dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 0.48 MCAODC_09715 yggX oxidative damage protection protein 0.74 MCAODC_05145 ilvD dihydroxy-acid dehydratase low > 87
Escherichia coli ECOR38 0.48 HEPCGN_18465 yggX oxidative damage protection protein 0.74 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00754 putative Fe(2+)-trafficking protein 0.74 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli BL21 0.48 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.74 ECD_03649 dihydroxyacid dehydratase low > 61
Dickeya dadantii 3937 0.48 DDA3937_RS04895 oxidative damage protection protein 0.73 DDA3937_RS20155 dihydroxy-acid dehydratase 0.51 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Escherichia coli ECRC100 0.48 OKFHMN_19195 yggX oxidative damage protection protein 0.74 OKFHMN_14640 ilvD dihydroxy-acid dehydratase low > 80
Pectobacterium carotovorum WPP14 0.48 HER17_RS16630 oxidative damage protection protein 0.74 HER17_RS01075 dihydroxy-acid dehydratase low > 75
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02560 yggX oxidative damage protection protein 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS15385 oxidative damage protection protein 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.47 RS_RS06190 Fe(2+)-trafficking protein 0.29 RS_RS12105 dihydroxy-acid dehydratase — —
Ralstonia solanacearum UW163 0.47 UW163_RS12845 oxidative damage protection protein 0.29 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS17970 Fe(2+)-trafficking protein 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Rahnella sp. WP5 0.47 EX31_RS02740 oxidative damage protection protein 0.69 EX31_RS15005 dihydroxy-acid dehydratase low > 89
Escherichia coli Nissle 1917 0.47 ECOLIN_RS16475 oxidative damage protection protein 0.74 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.74 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2999 Fe-S cluster protector protein 0.73 EX28DRAFT_4443 dihydroxy-acid dehydratase low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_03819 putative Fe(2+)-trafficking protein 0.73 MPMX20_04499 Dihydroxy-acid dehydratase low > 85
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS05615 oxidative damage protection protein 0.80 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13060 oxidative damage protection protein 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13320 oxidative damage protection protein 0.26 LRK54_RS10320 dihydroxy-acid dehydratase low > 59
Dickeya dianthicola 67-19 0.46 HGI48_RS04905 oxidative damage protection protein 0.73 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS05240 oxidative damage protection protein 0.73 DZA65_RS21335 dihydroxy-acid dehydratase low > 75
Dechlorosoma suillum PS 0.46 Dsui_1571 Fe-S cluster protector protein 0.75 Dsui_1122 dihydroxy-acid dehydratase — —
Pantoea sp. MT58 0.46 IAI47_03555 oxidative damage protection protein 0.72 IAI47_01035 dihydroxy-acid dehydratase low > 76
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS11010 oxidative damage protection protein 0.81 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX 0.80 H281DRAFT_05312 dihydroxyacid dehydratase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX 0.80 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Erwinia tracheiphila SCR3 0.45 LU632_RS05415 oxidative damage protection protein 0.71 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Variovorax sp. OAS795 0.45 ABID97_RS15460 oxidative damage protection protein 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Variovorax sp. SCN45 0.45 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.30 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.79 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS02400 oxidative damage protection protein 0.69 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS12990 iron transporter 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.86 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —

Not shown: 1 genomes with orthologs for Psyr_4902 only; 32 genomes with orthologs for Psyr_0469 only