Conservation of cofitness between PP_4789 and PP_5262 in Pseudomonas putida KT2440

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein 1.0 PP_5262 Probable multidrug resistance protein NorM 0.32 11
Pseudomonas fluorescens SBW25 0.97 PFLU_RS26570 HlyC/CorC family transporter 0.65 PFLU_RS29335 NorM family multidrug efflux MATE transporter low > 109
Pseudomonas simiae WCS417 0.97 PS417_24640 magnesium transporter 0.65 PS417_27660 multidrug transporter
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS26570 HlyC/CorC family transporter 0.65 PFLU_RS29335 NorM family multidrug efflux MATE transporter low > 109
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_06390 magnesium transporter 0.72 AO353_09110 MATE family efflux transporter low > 101
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1377 Magnesium and cobalt efflux protein CorC 0.71 PfGW456L13_821 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog low > 87
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2709 Magnesium and cobalt efflux protein CorC 0.70 Pf1N1B4_2153 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog low > 87
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_5015 Magnesium and cobalt efflux protein CorC 0.70 Pf6N2E2_4400 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog low > 103
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_15395 magnesium transporter 0.70 AO356_12665 MATE family efflux transporter low > 104
Pseudomonas sp. RS175 0.96 PFR28_03851 Magnesium and cobalt efflux protein CorC 0.70 PFR28_04390 Multidrug resistance protein MdtK low > 88
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4348 CBS:Transporter-associated region 0.65 Psyr_0073 Multi antimicrobial extrusion protein MatE
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4348 CBS:Transporter-associated region 0.65 Psyr_0073 Multi antimicrobial extrusion protein MatE low > 86
Pseudomonas sp. S08-1 0.88 OH686_09230 Magnesium and cobalt efflux protein CorC 0.60 OH686_13730 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM,-related low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_0529 Putative Mg2+ and Co2+ transporter CorC 0.24 Psest_2549 putative efflux protein, MATE family low > 67
Marinobacter adhaerens HP15 0.61 HP15_2470 metal ion transporter 0.22 HP15_3913 multidrug resistance protein NorM low > 73
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0096 Putative Mg2+ and Co2+ transporter CorC 0.20 B158DRAFT_2495 putative efflux protein, MATE family low > 40
Alteromonas macleodii MIT1002 0.53 MIT1002_01477 Magnesium and cobalt efflux protein CorC 0.23 MIT1002_02233 Na(+)/drug antiporter
Lysobacter sp. OAE881 0.51 ABIE51_RS15510 transporter associated domain-containing protein 0.14 ABIE51_RS02170 MATE family efflux transporter low > 62
Paraburkholderia graminis OAS925 0.51 ABIE53_003483 magnesium and cobalt transporter 0.27 ABIE53_003081 MATE family multidrug resistance protein low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS16555 cation transporter 0.26 BPHYT_RS14600 multidrug transporter MatE low > 109
Shewanella loihica PV-4 0.51 Shew_2926 CBS domain-containing protein (RefSeq) 0.19 Shew_2037 MATE efflux family protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.51 SO1178 corC magnesium and cobalt efflux protein CorC (NCBI ptt file) 0.20 SO2295 MATE efflux family protein (NCBI ptt file)
Shewanella amazonensis SB2B 0.51 Sama_2578 magnesium and cobalt efflux protein CorC (RefSeq) 0.19 Sama_1761 MATE efflux family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.51 Shewana3_1005 CBS domain-containing protein (RefSeq) 0.20 Shewana3_2039 MATE efflux family protein (RefSeq) low > 73
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS07760 HlyC/CorC family transporter 0.17 ABZR87_RS10730 MATE family efflux transporter low > 80
Ralstonia solanacearum PSI07 0.51 RPSI07_RS21410 HlyC/CorC family transporter 0.16 RPSI07_RS18275 MATE family efflux transporter low > 81
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS11805 HlyC/CorC family transporter 0.16 RALBFv3_RS15100 MATE family efflux transporter low > 76
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS02175 HlyC/CorC family transporter 0.26 QEN71_RS04380 MATE family efflux transporter low > 153
Ralstonia solanacearum UW163 0.50 UW163_RS01780 HlyC/CorC family transporter 0.16 UW163_RS12570 MATE family efflux transporter
Ralstonia solanacearum GMI1000 0.50 RS_RS02630 HlyC/CorC family transporter 0.17 RS_RS05915 MATE family efflux transporter low > 80
Dechlorosoma suillum PS 0.50 Dsui_1197 putative Mg2+ and Co2+ transporter CorC 0.14 Dsui_1442 putative efflux protein, MATE family low > 51
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS13710 CBS domain-containing protein 0.22 LRK54_RS11085 MATE family efflux transporter low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS13450 transporter associated domain-containing protein 0.22 LRK55_RS10790 MATE family efflux transporter low > 63
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS03595 cation transporter 0.14 HSERO_RS04300 multidrug transporter MatE low > 78
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02840 cation transporter 0.14 RR42_RS13335 multidrug transporter MatE low > 128
Rahnella sp. WP5 0.49 EX31_RS23185 CNNM family magnesium/cobalt transport protein CorC 0.21 EX31_RS13855 MATE family efflux transporter low > 89
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2219.1 Magnesium and cobalt efflux protein CorC 0.17 Xcc-8004.4760.1 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM low > 74
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_04900 magnesium and cobalt efflux protein CorC 0.20 CSW01_07735 multidrug resistance protein NorM low > 62
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02955 CBS domain-containing protein 0.22 OKGIIK_12790 norM MATE family efflux transporter low > 52
Pantoea sp. MT58 0.48 IAI47_13960 CNNM family magnesium/cobalt transport protein CorC 0.20 IAI47_10820 MATE family efflux transporter
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2313 Putative Mg2+ and Co2+ transporter CorC 0.21 EX28DRAFT_1660 putative efflux protein, MATE family low > 76
Serratia liquefaciens MT49 0.47 IAI46_06005 CNNM family magnesium/cobalt transport protein CorC 0.23 IAI46_11210 MATE family efflux transporter low > 86
Enterobacter sp. TBS_079 0.47 MPMX20_01308 Magnesium and cobalt efflux protein CorC 0.21 MPMX20_01973 Multidrug resistance protein MdtK low > 85
Klebsiella michiganensis M5al 0.47 BWI76_RS08120 cobalt transporter 0.23 BWI76_RS16535 MATE family efflux transporter low > 92
Escherichia coli ECOR27 0.47 NOLOHH_23620 corC CNNM family magnesium/cobalt transport protein CorC 0.21 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK
Escherichia coli ECRC101 0.47 MCAODC_26455 corC CNNM family magnesium/cobalt transport protein CorC 0.21 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_03054 Magnesium and cobalt efflux protein CorC 0.21 OHPLBJKB_02061 Multidrug resistance protein MdtK
Escherichia coli ECRC98 0.47 JDDGAC_10885 corC CNNM family magnesium/cobalt transport protein CorC 0.21 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK
Escherichia fergusonii Becca 0.47 EFB2_03441 Magnesium and cobalt efflux protein CorC 0.21 EFB2_02329 Multidrug resistance protein MdtK low > 86
Escherichia coli BL21 0.47 ECD_00626 putative ion transport 0.21 ECD_01634 multidrug efflux system transporter low > 60
Escherichia coli ECRC101 0.47 OKFHMN_07240 corC CNNM family magnesium/cobalt transport protein CorC 0.21 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK
Escherichia coli BW25113 0.47 b0658 ybeX predicteed ion transport (NCBI) 0.21 b1663 mdtK multidrug efflux protein NorM (NCBI) low > 76
Escherichia coli Nissle 1917 0.47 ECOLIN_RS03540 CNNM family magnesium/cobalt transport protein CorC 0.21 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK
Escherichia coli ECRC102 0.47 NIAGMN_05295 corC CNNM family magnesium/cobalt transport protein CorC 0.21 NIAGMN_00705 mdtK multidrug efflux MATE transporter MdtK
Escherichia coli ECRC99 0.47 KEDOAH_20730 corC CNNM family magnesium/cobalt transport protein CorC 0.21 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK
Escherichia coli ECOR38 0.47 HEPCGN_00990 corC CNNM family magnesium/cobalt transport protein CorC 0.21 HEPCGN_05745 mdtK multidrug efflux MATE transporter MdtK
Escherichia coli ECRC62 0.46 BNILDI_21625 corC CNNM family magnesium/cobalt transport protein CorC 0.21 BNILDI_16670 mdtK multidrug efflux MATE transporter MdtK
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4575 Magnesium and cobalt efflux protein CorC 0.21 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps low > 78
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS09930 transporter associated domain-containing protein 0.23 ABZR86_RS12525 MATE family efflux transporter low > 74
Erwinia tracheiphila SCR3 0.46 LU632_RS16320 corC CNNM family magnesium/cobalt transport protein CorC 0.19 LU632_RS11170 MATE family efflux transporter low > 74
Pectobacterium carotovorum WPP14 0.46 HER17_RS15180 CNNM family magnesium/cobalt transport protein CorC 0.22 HER17_RS09220 MATE family efflux transporter low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS06235 CNNM family magnesium/cobalt transport protein CorC 0.07 DDA3937_RS13645 MATE family efflux transporter low > 74
Dickeya dianthicola ME23 0.44 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC 0.22 DZA65_RS13155 MATE family efflux transporter low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS06280 CNNM family magnesium/cobalt transport protein CorC 0.23 HGI48_RS12700 MATE family efflux transporter low > 71
Variovorax sp. OAS795 0.39 ABID97_RS25345 transporter associated domain-containing protein 0.13 ABID97_RS14630 MATE family efflux transporter low > 91
Variovorax sp. SCN45 0.39 GFF1965 Magnesium and cobalt efflux protein CorC 0.13 GFF1099 Na+-driven multidrug efflux pump low > 127
Acidovorax sp. GW101-3H11 0.37 Ac3H11_1857 Magnesium and cobalt efflux protein CorC 0.13 Ac3H11_463 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog low > 79
Acinetobacter radioresistens SK82 0.36 MPMX26_00287 Magnesium and cobalt efflux protein CorC 0.22 MPMX26_00306 Multidrug resistance protein NorM low > 36
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15330 transporter associated domain-containing protein 0.14 ABCV34_RS00895 MATE family efflux transporter low > 48
Bosea sp. OAE506 0.24 ABIE41_RS04510 hemolysin family protein 0.21 ABIE41_RS08515 MATE family efflux transporter low > 77
Rhodospirillum rubrum S1H 0.24 Rru_A3773 CBS domain protein (NCBI) 0.26 Rru_A0697 Multi antimicrobial extrusion protein MatE (NCBI) low > 58

Not shown: 4 genomes with orthologs for PP_4789 only; 25 genomes with orthologs for PP_5262 only