Conservation of cofitness between PP_5033 and PP_5030 in Pseudomonas putida KT2440

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5033 Urocanate hydratase 1.0 PP_5030 Imidazolonepropionase 0.49 4
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) 0.85 PfGW456L13_317 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.93 2
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) 0.84 Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.47 10
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) 0.84 AO353_12280 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.82 1
Pseudomonas sp. S08-1 0.93 OH686_16745 urocanate hydratase 0.48 OH686_16735 imidazolonepropionase low > 80
Pseudomonas sp. RS175 0.93 PFR28_04965 Urocanate hydratase 0.82 PFR28_04972 Imidazolonepropionase low > 88
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) 0.83 Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.85 2
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS01775 urocanate hydratase 0.83 PFLU_RS01815 imidazolonepropionase low > 109
Pseudomonas simiae WCS417 0.92 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) 0.84 PS417_01760 imidazolonepropionase 0.54 2
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) 0.83 AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.95 4
Pseudomonas fluorescens SBW25 0.92 PFLU_RS01775 urocanate hydratase 0.83 PFLU_RS01815 imidazolonepropionase low > 109
Cupriavidus basilensis FW507-4G11 0.92 RR42_RS14645 urocanate hydratase 0.56 RR42_RS16905 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 128
Serratia liquefaciens MT49 0.91 IAI46_03665 urocanate hydratase 0.60 IAI46_10610 imidazolonepropionase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4828 urocanate hydratase 0.82 Psyr_4835 imidazolonepropionase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4828 urocanate hydratase 0.82 Psyr_4835 imidazolonepropionase low > 86
Enterobacter asburiae PDN3 0.87 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) 0.48 EX28DRAFT_2223 imidazolonepropionase (EC 3.5.2.7) low > 76
Enterobacter sp. TBS_079 0.87 MPMX20_01399 Urocanate hydratase 0.49 MPMX20_01396 Imidazolonepropionase 0.64 2
Klebsiella michiganensis M5al 0.86 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) 0.52 BWI76_RS08720 imidazolonepropionase 0.22 9
Dyella japonica UNC79MFTsu3.2 0.84 ABZR86_RS07755 urocanate hydratase 0.57 ABZR86_RS07870 imidazolonepropionase low > 74
Rhodanobacter denitrificans MT42 0.83 LRK55_RS16070 urocanate hydratase 0.55 LRK55_RS15980 imidazolonepropionase low > 63
Rhodanobacter denitrificans FW104-10B01 0.83 LRK54_RS16320 urocanate hydratase 0.55 LRK54_RS16230 imidazolonepropionase 0.45 11
Rhodanobacter sp. FW510-T8 0.82 OKGIIK_08350 hutU urocanate hydratase 0.54 OKGIIK_08425 hutI imidazolonepropionase low > 52
Lysobacter sp. OAE881 0.81 ABIE51_RS06295 urocanate hydratase 0.53 ABIE51_RS06250 imidazolonepropionase 0.78 58
Kangiella aquimarina DSM 16071 0.80 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) 0.56 B158DRAFT_1437 imidazolonepropionase (EC 3.5.2.7) low > 40
Sinorhizobium meliloti 1021 0.77 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) 0.45 SM_b21166 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.83 2
Variovorax sp. SCN45 0.77 GFF6408 Urocanate hydratase (EC 4.2.1.49) 0.53 GFF6402 Imidazolonepropionase (EC 3.5.2.7) low > 127
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS01030 urocanate hydratase 0.56 ABZR87_RS01015 imidazolonepropionase low > 80
Ralstonia solanacearum PSI07 0.77 RPSI07_RS11910 urocanate hydratase 0.56 RPSI07_RS11925 imidazolonepropionase low > 81
Agrobacterium fabrum C58 0.77 Atu3931 urocanate hydratase 0.50 Atu3934 imidazolonepropionase 0.43 3
Rhizobium sp. OAE497 0.76 ABIE40_RS20360 urocanate hydratase 0.46 ABIE40_RS20350 imidazolonepropionase 0.90 2
Variovorax sp. OAS795 0.76 ABID97_RS03425 urocanate hydratase 0.54 ABID97_RS03435 imidazolonepropionase 0.93 5
Sphingomonas koreensis DSMZ 15582 0.76 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) 0.46 Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.72 1
Acidovorax sp. GW101-3H11 0.76 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) 0.53 Ac3H11_2550 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.88 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF3590 Urocanate hydratase (EC 4.2.1.49) 0.55 GFF3588 Imidazolonepropionase (EC 3.5.2.7) low > 90
Bosea sp. OAE506 0.76 ABIE41_RS23655 urocanate hydratase 0.53 ABIE41_RS23640 imidazolonepropionase 0.72 2
Rhodospirillum rubrum S1H 0.76 Rru_A1304 Urocanate hydratase (NCBI) 0.51 Rru_A1303 Imidazolonepropionase (NCBI) low > 58
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_06085 urocanate hydratase 0.47 CSW01_06095 imidazolonepropionase low > 62
Ralstonia solanacearum GMI1000 0.75 RS_RS13255 urocanate hydratase 0.55 RS_RS13240 imidazolonepropionase low > 80
Azospirillum brasilense Sp245 0.75 AZOBR_RS21740 urocanate hydratase 0.60 AZOBR_RS21725 imidazolonepropionase low > 97
Alteromonas macleodii MIT1002 0.75 MIT1002_00904 Urocanate hydratase 0.47 MIT1002_00902 Imidazolonepropionase 0.44 20
Ralstonia solanacearum UW163 0.75 UW163_RS08230 urocanate hydratase 0.54 UW163_RS08245 imidazolonepropionase — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS05395 urocanate hydratase 0.54 RALBFv3_RS05380 imidazolonepropionase low > 76
Shewanella loihica PV-4 0.75 Shew_3757 urocanate hydratase (RefSeq) 0.52 Shew_3759 imidazolonepropionase (RefSeq) low > 60
Caulobacter crescentus NA1000 0.75 CCNA_01008 urocanate hydratase 0.47 CCNA_01011 imidazolonepropionase low > 66
Caulobacter crescentus NA1000 Δfur 0.75 CCNA_01008 urocanate hydratase 0.47 CCNA_01011 imidazolonepropionase 0.72 39
Azospirillum sp. SherDot2 0.75 MPMX19_04936 Urocanate hydratase 0.53 MPMX19_04938 Imidazolonepropionase low > 112
Escherichia coli ECOR38 0.75 HEPCGN_01335 hutU urocanate hydratase 0.50 HEPCGN_01350 hutI imidazolonepropionase low > 85
Rahnella sp. WP5 0.75 EX31_RS06760 urocanate hydratase 0.65 EX31_RS06720 imidazolonepropionase low > 89
Pantoea sp. MT58 0.74 IAI47_13280 urocanate hydratase 0.61 IAI47_13255 imidazolonepropionase 0.31 27
Dickeya dadantii 3937 0.74 DDA3937_RS14990 urocanate hydratase 0.62 DDA3937_RS15060 imidazolonepropionase low > 74
Phaeobacter inhibens DSM 17395 0.74 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) 0.50 PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.78 3
Shewanella oneidensis MR-1 0.74 SO0097 hutU urocanate hydratase (NCBI ptt file) 0.51 SO0095 hutI Imidazolonepropionase (EC 3.5.2.7) (from data) 0.29 29
Shewanella sp. ANA-3 0.74 Shewana3_0100 urocanate hydratase (RefSeq) 0.51 Shewana3_0098 imidazolonepropionase (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) 0.47 Xcc-8004.3295.1 Imidazolonepropionase (EC 3.5.2.7) low > 74
Castellaniella sp019104865 MT123 0.73 ABCV34_RS12785 urocanate hydratase 0.53 ABCV34_RS12775 imidazolonepropionase low > 48
Brevundimonas sp. GW460-12-10-14-LB2 0.73 A4249_RS06625 urocanate hydratase 0.53 A4249_RS06605 imidazolonepropionase low > 48
Dickeya dianthicola 67-19 0.73 HGI48_RS15085 urocanate hydratase 0.62 HGI48_RS15140 imidazolonepropionase low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS15830 urocanate hydratase 0.61 DZA65_RS15940 imidazolonepropionase low > 75
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS23505 urocanate hydratase 0.59 QEN71_RS23495 imidazolonepropionase 0.74 2
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS07565 urocanate hydratase 0.57 BPHYT_RS07575 imidazolonepropionase 0.40 4
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04871 urocanate hydratase 0.57 H281DRAFT_04869 imidazolonepropionase low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.58 CA264_08875 urocanate hydratase 0.24 CA264_08870 imidazolonepropionase low > 74
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS00360 urocanate hydratase 0.32 HMPREF1181_RS00350 imidazolonepropionase low > 56
Shewanella amazonensis SB2B 0.27 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) 0.49 Sama_0080 imidazolonepropionase (RefSeq) 0.61 5

Not shown: 1 genomes with orthologs for PP_5033 only; 7 genomes with orthologs for PP_5030 only