Conservation of cofitness between PP_4787 and PP_4653 in Pseudomonas putida KT2440

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4787 putative protein with nucleoside triphosphate hydrolase domain 1.0 PP_4653 adenine:H+ symporter 0.27 14
Pseudomonas sp. RS175 0.89 PFR28_03849 PhoH-like protein 0.93 PFR28_03808 Adenine permease AdeP low > 88
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15405 ATP-binding protein 0.92 AO356_15605 guanine permease low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_5017 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.93 Pf6N2E2_5064 Xanthine/uracil/thiamine/ascorbate permease family protein low > 103
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS26560 PhoH family protein 0.92 PFLU_RS26300 NCS2 family permease low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS26560 PhoH family protein 0.92 PFLU_RS26300 NCS2 family permease low > 109
Pseudomonas simiae WCS417 0.87 PS417_24630 ATP-binding protein 0.92 PS417_24380 guanine permease low > 88
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2711 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.93 Pf1N1B4_2755 Xanthine/uracil/thiamine/ascorbate permease family protein low > 87
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1379 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.92 PfGW456L13_1431 Xanthine/uracil/thiamine/ascorbate permease family protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_06380 ATP-binding protein 0.93 AO353_13910 guanine permease low > 101
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_4346 PhoH-like protein 0.93 Psyr_4286 Xanthine/uracil/vitamin C permease low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_4346 PhoH-like protein 0.93 Psyr_4286 Xanthine/uracil/vitamin C permease low > 86
Pseudomonas sp. S08-1 0.84 OH686_09220 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.85 OH686_16065 Xanthine/uracil/thiamine/ascorbate permease family protein low > 80
Pseudomonas stutzeri RCH2 0.84 Psest_0531 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.74 Psest_3450 Permeases low > 67
Marinobacter adhaerens HP15 0.64 HP15_2467 PhoH family protein 0.67 HP15_2548 xanthine/uracil permease family protein low > 73
Lysobacter sp. OAE881 0.61 ABIE51_RS15500 PhoH family protein 0.56 ABIE51_RS04590 NCS2 family permease low > 62
Erwinia tracheiphila SCR3 0.59 LU632_RS16310 PhoH family protein 0.30 LU632_RS23270 NCS2 family permease low > 74
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.2223.1 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.49 Xcc-8004.378.1 Xanthine/uracil/thiamine/ascorbate permease family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_04910 PhoH family protein 0.67 CSW01_11595 NCS2 family permease low > 62
Acinetobacter radioresistens SK82 0.58 MPMX26_02668 PhoH-like protein 0.63 MPMX26_01078 Adenine permease AdeP low > 36
Shewanella amazonensis SB2B 0.58 Sama_2576 PhoH family protein (RefSeq) 0.65 Sama_2517 xanthine/uracil permease family protein (RefSeq)
Escherichia coli ECRC98 0.57 JDDGAC_10875 ybeZ PhoH-like protein 0.52 JDDGAC_18555 adeP adenine permease AdeP
Escherichia coli ECOR38 0.57 HEPCGN_01000 ybeZ PhoH-like protein 0.53 HEPCGN_13930 adeQ adenine permease AdeQ low > 85
Shewanella sp. ANA-3 0.57 Shewana3_1007 PhoH family protein (RefSeq) 0.62 Shewana3_0953 xanthine/uracil/vitamin C permease (RefSeq) low > 73
Escherichia coli ECRC101 0.57 OKFHMN_07230 ybeZ PhoH-like protein 0.52 OKFHMN_14935 adeP adenine permease AdeP
Escherichia coli ECOR27 0.57 NOLOHH_23610 ybeZ PhoH-like protein 0.53 NOLOHH_07360 adeQ adenine permease AdeQ low > 57
Escherichia fergusonii Becca 0.57 EFB2_03439 PhoH-like protein 0.53 EFB2_00034 Adenine permease AdeQ low > 86
Escherichia coli ECRC62 0.57 BNILDI_21615 ybeZ PhoH-like protein 0.52 BNILDI_04445 adeP adenine permease AdeP
Escherichia coli ECRC99 0.57 KEDOAH_20740 ybeZ PhoH-like protein 0.52 KEDOAH_13215 adeP adenine permease AdeP
Escherichia coli BL21 0.57 ECD_00628 heat shock protein, putative NTPase; PhoH-like protein 0.53 ECD_03548 adenine permease, high affinity; adenine:H+ symporter low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03052 PhoH-like protein 0.52 OHPLBJKB_04339 Adenine permease AdeP low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS03550 PhoH family protein 0.53 ECOLIN_RS21135 adenine permease AdeQ low > 52
Escherichia coli ECRC101 0.57 MCAODC_26445 ybeZ PhoH-like protein 0.52 MCAODC_05445 adeP adenine permease AdeP
Escherichia coli BW25113 0.57 b0660 ybeZ predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) 0.52 b3714 yieG predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC102 0.57 NIAGMN_05285 ybeZ PhoH-like protein 0.52 NIAGMN_12690 adeP adenine permease AdeP
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4577 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.54 GFF1740 Xanthine/uracil/thiamine/ascorbate permease family protein low > 78
Enterobacter sp. TBS_079 0.57 MPMX20_01310 PhoH-like protein 0.54 MPMX20_04645 Adenine permease AdeP low > 85
Pectobacterium carotovorum WPP14 0.57 HER17_RS15170 PhoH family protein 0.53 HER17_RS21740 NCS2 family permease low > 75
Dickeya dianthicola ME23 0.56 DZA65_RS06635 PhoH family protein 0.55 DZA65_RS22590 NCS2 family permease low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS06245 PhoH family protein 0.55 DDA3937_RS21425 NCS2 family permease low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS06290 PhoH family protein 0.55 HGI48_RS21605 NCS2 family permease low > 71
Pantoea sp. MT58 0.56 IAI47_13950 PhoH family protein 0.80 IAI47_07860 NCS2 family permease low > 76
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2311 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.54 EX28DRAFT_3998 Permeases low > 76
Shewanella oneidensis MR-1 0.56 SO1180 PhoH family protein (NCBI ptt file) 0.63 SO1120 xanthine/uracil permease family protein (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.56 BWI76_RS08130 nucleoside triphosphate hydrolase 0.53 BWI76_RS00110 adenine permease PurP
Serratia liquefaciens MT49 0.56 IAI46_06015 PhoH family protein 0.54 IAI46_25220 NCS2 family permease low > 86
Shewanella loihica PV-4 0.56 Shew_2924 PhoH family protein (RefSeq) 0.63 Shew_2849 xanthine/uracil/vitamin C permease (RefSeq)
Rahnella sp. WP5 0.55 EX31_RS23195 PhoH family protein 0.83 EX31_RS07080 NCS2 family permease low > 89
Ralstonia solanacearum GMI1000 0.53 RS_RS02640 PhoH family protein 0.63 RS_RS25155 NCS2 family permease low > 80
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS16540 phosphate starvation protein PhoH 0.60 BPHYT_RS28070 adenine permease low > 109
Ralstonia solanacearum UW163 0.52 UW163_RS01765 PhoH family protein 0.62 UW163_RS16520 NCS2 family permease
Paraburkholderia graminis OAS925 0.52 ABIE53_003480 phosphate starvation-inducible PhoH-like protein 0.61 ABIE53_005727 AGZA family xanthine/uracil permease-like MFS transporter low > 113
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS11820 PhoH family protein 0.62 RALBFv3_RS23270 NCS2 family permease low > 76
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04240 phosphate starvation-inducible protein PhoH 0.61 H281DRAFT_01209 putative MFS transporter, AGZA family, xanthine/uracil permease low > 103
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS07775 PhoH family protein 0.64 ABZR87_RS23585 NCS2 family permease low > 80
Castellaniella sp019104865 MT123 0.52 ABCV34_RS15340 PhoH family protein 0.61 ABCV34_RS03015 NCS2 family permease low > 48
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS03610 phosphate starvation protein PhoH 0.62 HSERO_RS16315 adenine permease low > 78
Ralstonia solanacearum PSI07 0.51 RPSI07_RS21385 PhoH family protein 0.35 RPSI07_RS20205 NCS2 family permease low > 81
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS02190 PhoH family protein 0.59 QEN71_RS12430 NCS2 family permease low > 153
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS02850 phoH-like protein 0.34 RR42_RS31605 permease low > 128
Variovorax sp. OAS795 0.51 ABID97_RS24925 PhoH family protein 0.62 ABID97_RS22110 NCS2 family permease low > 91
Dechlorosoma suillum PS 0.50 Dsui_1195 phosphate starvation-inducible protein PhoH, predicted ATPase 0.60 Dsui_2705 permease low > 51
Variovorax sp. SCN45 0.50 GFF2072 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.62 GFF1843 Xanthine/uracil/thiamine/ascorbate permease family protein low > 127
Sinorhizobium meliloti 1021 0.44 SMc01114 phoH-like protein 0.62 SM_b21281 xanthine uracil permease low > 103
Rhizobium sp. OAE497 0.44 ABIE40_RS01700 PhoH family protein 0.62 ABIE40_RS25255 NCS2 family permease low > 107
Magnetospirillum magneticum AMB-1 0.40 AMB_RS22590 PhoH family protein 0.60 AMB_RS22050 NCS2 family permease low > 64
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU1881 phoH phoH family protein (TIGR) 0.50 DVU2113 xanthine/uracil permease family protein (TIGR) low > 55
Bifidobacterium breve UCC2003 0.38 BBR_RS15160 PhoH family protein 0.37 BBR_RS19145 NCS2 family permease low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_01950 PhoH family protein 0.39 CA264_08610 NCS2 family permease low > 74
Caulobacter crescentus NA1000 0.36 CCNA_00053 phosphate starvation-inducible protein PhoH 0.47 CCNA_00186 guanine-hypoxanthine permease low > 66
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_00053 phosphate starvation-inducible protein PhoH 0.47 CCNA_00186 guanine-hypoxanthine permease low > 67

Not shown: 29 genomes with orthologs for PP_4787 only; 3 genomes with orthologs for PP_4653 only