Conservation of cofitness between PP_2327 and PP_3511 in Pseudomonas putida KT2440

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 1.0 PP_3511 Branched-chain-amino-acid aminotransferase 0.82 9
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.85 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 103
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_19060 CysB family transcriptional regulator 0.85 AO353_26655 branched-chain amino acid aminotransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_03180 CysB family transcriptional regulator 0.85 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.85 PfGW456L13_3544 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.86 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas sp. RS175 0.96 PFR28_00966 HTH-type transcriptional regulator CysB 0.85 PFR28_02449 putative branched-chain-amino-acid aminotransferase low > 88
Pseudomonas fluorescens SBW25 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.87 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.87 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas simiae WCS417 0.96 PS417_08460 CysB family transcriptional regulator 0.87 PS417_17565 branched-chain amino acid aminotransferase — —
Pseudomonas sp. S08-1 0.93 OH686_01730 Cys regulon transcriptional activator CysB 0.11 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.83 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.69 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.83 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas stutzeri RCH2 0.91 Psest_2329 Transcriptional regulator 0.11 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 67
Marinobacter adhaerens HP15 0.80 HP15_1854 transcriptional regulator, LysR family 0.11 HP15_436 branched-chain-amino-acid aminotransferase — —
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_09545 HTH-type transcriptional regulator CysB 0.15 CSW01_00145 branched-chain-amino-acid transaminase — —
Dickeya dianthicola 67-19 0.69 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.16 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Dickeya dadantii 3937 0.68 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.16 DDA3937_RS20160 branched-chain-amino-acid transaminase low > 74
Alteromonas macleodii MIT1002 0.68 MIT1002_02005 Cys regulon transcriptional activator 0.24 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 — —
Rahnella sp. WP5 0.68 EX31_RS09890 HTH-type transcriptional regulator CysB 0.17 EX31_RS15000 branched-chain amino acid transaminase 0.89 64
Dickeya dianthicola ME23 0.68 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.16 DZA65_RS21340 branched-chain amino acid transaminase 0.62 38
Pectobacterium carotovorum WPP14 0.68 HER17_RS10870 HTH-type transcriptional regulator CysB 0.16 HER17_RS01070 branched-chain amino acid transaminase 0.89 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2712 Cys regulon transcriptional activator CysB 0.18 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Serratia liquefaciens MT49 0.68 IAI46_13965 HTH-type transcriptional regulator CysB 0.17 IAI46_24350 branched-chain-amino-acid transaminase — —
Enterobacter sp. TBS_079 0.67 MPMX20_02501 HTH-type transcriptional regulator CysB 0.17 MPMX20_04500 Branched-chain-amino-acid aminotransferase — —
Pantoea sp. MT58 0.67 IAI47_09240 HTH-type transcriptional regulator CysB 0.17 IAI47_01030 branched-chain amino acid transaminase 0.70 18
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0946 Transcriptional regulator 0.17 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I — —
Klebsiella michiganensis M5al 0.67 BWI76_RS11930 LysR family transcriptional regulator CysB 0.18 BWI76_RS00970 branched chain amino acid aminotransferase — —
Escherichia coli ECOR38 0.67 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.18 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase — —
Erwinia tracheiphila SCR3 0.67 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.17 LU632_RS24405 branched-chain amino acid transaminase — —
Escherichia coli ECRC99 0.67 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.18 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.18 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia coli ECRC62 0.67 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.18 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR27 0.67 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.18 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli BL21 0.67 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.18 ECD_03648 branched-chain amino acid aminotransferase — —
Escherichia coli ECRC98 0.67 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.18 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 0.67 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.18 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 0.67 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.18 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.18 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli BW25113 0.67 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.18 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) — —
Escherichia fergusonii Becca 0.67 EFB2_02652 HTH-type transcriptional regulator CysB 0.18 EFB2_04866 Branched-chain-amino-acid aminotransferase — —
Escherichia coli ECRC101 0.67 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.18 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Shewanella amazonensis SB2B 0.66 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.28 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.66 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.27 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.27 Shew_0278 branched-chain amino acid aminotransferase (RefSeq) — —
Shewanella sp. ANA-3 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.27 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) — —
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.14 Dsui_3339 branched-chain amino acid aminotransferase, group I — —
Paraburkholderia graminis OAS925 0.49 ABIE53_001994 LysR family cys regulon transcriptional activator 0.14 ABIE53_003432 branched-chain amino acid aminotransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00782 transcriptional regulator, LysR family 0.14 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS08810 CysB family transcriptional regulator 0.14 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS22570 CysB family HTH-type transcriptional regulator 0.15 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.11 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Variovorax sp. SCN45 0.47 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl 0.12 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator 0.31 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS08245 CysB family transcriptional regulator 0.14 HSERO_RS03330 branched-chain amino acid aminotransferase low > 78
Ralstonia solanacearum PSI07 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator 0.12 RPSI07_RS21175 branched-chain amino acid transaminase low > 81
Ralstonia solanacearum UW163 0.46 UW163_RS13430 CysB family HTH-type transcriptional regulator 0.29 UW163_RS18230 branched-chain amino acid aminotransferase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator 0.29 RALBFv3_RS16875 branched-chain amino acid aminotransferase low > 76
Ralstonia solanacearum GMI1000 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator 0.29 RS_RS23675 branched-chain amino acid aminotransferase — —
Variovorax sp. OAS795 0.46 ABID97_RS02980 CysB family HTH-type transcriptional regulator 0.13 ABID97_RS03790 branched-chain amino acid transaminase low > 91
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS12245 transcriptional regulator 0.33 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.11 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Acinetobacter radioresistens SK82 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR 0.10 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.93 5
Castellaniella sp019104865 MT123 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.11 ABCV34_RS07930 branched-chain amino acid transaminase low > 48
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.16 ABZR86_RS11580 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 74
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.16 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.15 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.15 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.14 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.33 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.59 51

Not shown: 1 genomes with orthologs for PP_2327 only; 25 genomes with orthologs for PP_3511 only