| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_2327 | | transcriptional dual regulator / CysB-O-acetyl-L-serine | 1.0 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.81 | 18 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_03180 | | CysB family transcriptional regulator | 0.89 | AO356_21400 | | isopropylmalate isomerase | 0.48 | 38 |
| Pseudomonas fluorescens FW300-N2E2 | 0.97 | Pf6N2E2_2465 | | Cys regulon transcriptional activator CysB | 0.89 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.73 | 15 |
| Pseudomonas fluorescens FW300-N2E3 | 0.97 | AO353_19060 | | CysB family transcriptional regulator | 0.89 | AO353_20620 | | isopropylmalate isomerase | 0.63 | 22 |
| Pseudomonas fluorescens GW456-L13 | 0.97 | PfGW456L13_2230 | | Cys regulon transcriptional activator CysB | 0.90 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.90 | 8 |
| Pseudomonas fluorescens FW300-N1B4 | 0.96 | Pf1N1B4_283 | | Cys regulon transcriptional activator CysB | 0.90 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | — | — |
| Pseudomonas sp. RS175 | 0.96 | PFR28_00966 | | HTH-type transcriptional regulator CysB | 0.89 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.96 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | 0.89 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.41 | 23 |
| Pseudomonas fluorescens SBW25 | 0.96 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | 0.89 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | low | > 109 |
| Pseudomonas simiae WCS417 | 0.96 | PS417_08460 | | CysB family transcriptional regulator | 0.89 | PS417_18600 | | isopropylmalate isomerase | — | — |
| Pseudomonas sp. S08-1 | 0.93 | OH686_01730 | | Cys regulon transcriptional activator CysB | 0.86 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_2077 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.87 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.81 | 15 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_2077 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.87 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.71 | 22 |
| Pseudomonas stutzeri RCH2 | 0.91 | Psest_2329 | | Transcriptional regulator | 0.88 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.70 | 22 |
| Marinobacter adhaerens HP15 | 0.80 | HP15_1854 | | transcriptional regulator, LysR family | 0.78 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.70 | CSW01_09545 | | HTH-type transcriptional regulator CysB | 0.58 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS10540 | | HTH-type transcriptional regulator CysB | 0.60 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | low | > 71 |
| Dickeya dadantii 3937 | 0.68 | DDA3937_RS10540 | | HTH-type transcriptional regulator CysB | 0.60 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.68 | MIT1002_02005 | | Cys regulon transcriptional activator | 0.58 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Dickeya dianthicola ME23 | 0.68 | DZA65_RS11020 | | HTH-type transcriptional regulator CysB | 0.60 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.62 | 43 |
| Rahnella sp. WP5 | 0.68 | EX31_RS09890 | | HTH-type transcriptional regulator CysB | 0.62 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.96 | 12 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS10870 | | HTH-type transcriptional regulator CysB | 0.61 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.96 | 3 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF2712 | | Cys regulon transcriptional activator CysB | 0.61 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | — | — |
| Serratia liquefaciens MT49 | 0.68 | IAI46_13965 | | HTH-type transcriptional regulator CysB | 0.59 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_0946 | | Transcriptional regulator | 0.61 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | — | — |
| Pantoea sp. MT58 | 0.67 | IAI47_09240 | | HTH-type transcriptional regulator CysB | 0.61 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.69 | 32 |
| Enterobacter sp. TBS_079 | 0.67 | MPMX20_02501 | | HTH-type transcriptional regulator CysB | 0.61 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Klebsiella michiganensis M5al | 0.67 | BWI76_RS11930 | | LysR family transcriptional regulator CysB | 0.60 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_25600 | cysB | HTH-type transcriptional regulator CysB | 0.61 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS12550 | cysB | HTH-type transcriptional regulator CysB | 0.56 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | — | — |
| Escherichia coli BW25113 | 0.67 | b1275 | cysB | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) | 0.61 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_02409 | | HTH-type transcriptional regulator CysB | 0.61 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | low | > 73 |
| Escherichia coli ECRC101 | 0.67 | MCAODC_15665 | cysB | HTH-type transcriptional regulator CysB | 0.61 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli BL21 | 0.67 | ECD_01251 | | N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor | 0.61 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_05145 | cysB | HTH-type transcriptional regulator CysB | 0.61 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_26165 | cysB | HTH-type transcriptional regulator CysB | 0.61 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC62 | 0.67 | BNILDI_18415 | cysB | HTH-type transcriptional regulator CysB | 0.61 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC101 | 0.67 | OKFHMN_02600 | cysB | HTH-type transcriptional regulator CysB | 0.61 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_20265 | cysB | HTH-type transcriptional regulator CysB | 0.61 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia fergusonii Becca | 0.67 | EFB2_02652 | | HTH-type transcriptional regulator CysB | 0.60 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_26770 | cysB | HTH-type transcriptional regulator CysB | 0.61 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS07680 | | HTH-type transcriptional regulator CysB | 0.61 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | low | > 52 |
| Shewanella amazonensis SB2B | 0.66 | Sama_1324 | cysB | transcriptional regulator CysB (RefSeq) | 0.59 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.66 | Shew_1624 | cysB | transcriptional regulator CysB (RefSeq) | 0.59 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.66 | SO2649 | cysB | cys regulon transcriptional activator (NCBI ptt file) | 0.59 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.84 | 21 |
| Shewanella sp. ANA-3 | 0.65 | Shewana3_1731 | cysB | transcriptional regulator CysB (RefSeq) | 0.59 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | — | — |
| Dechlorosoma suillum PS | 0.52 | Dsui_1988 | | transcriptional regulator | 0.66 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_00782 | | transcriptional regulator, LysR family | 0.71 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_001994 | | LysR family cys regulon transcriptional activator | 0.71 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS08810 | | CysB family transcriptional regulator | 0.71 | BPHYT_RS33915 | | isopropylmalate isomerase | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS22570 | | CysB family HTH-type transcriptional regulator | 0.71 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF5044 | | Alkanesulfonate utilization operon LysR-family regulator CbI | 0.67 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 90 |
| Variovorax sp. SCN45 | 0.47 | GFF3358 | | Alkanesulfonate utilization operon LysR-family regulator Cbl | 0.68 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS11555 | | CysB family HTH-type transcriptional regulator | 0.72 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.34 | 54 |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS08245 | | CysB family transcriptional regulator | 0.71 | HSERO_RS16515 | | isopropylmalate isomerase | low | > 78 |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS00100 | | CysB family HTH-type transcriptional regulator | 0.71 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS17385 | | CysB family HTH-type transcriptional regulator | 0.72 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | low | > 81 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS13430 | | CysB family HTH-type transcriptional regulator | 0.71 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS06760 | | CysB family HTH-type transcriptional regulator | 0.72 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | low | > 80 |
| Variovorax sp. OAS795 | 0.46 | ABID97_RS02980 | | CysB family HTH-type transcriptional regulator | 0.69 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS12245 | | transcriptional regulator | 0.72 | RR42_RS14400 | | isopropylmalate isomerase | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_2403 | | Alkanesulfonate utilization operon LysR-family regulator CbI | 0.67 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.67 | 24 |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_2455 | | Transcriptional regulator | 0.76 | B158DRAFT_1319 | | 3-isopropylmalate dehydratase, large subunit | low | > 40 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02171 | | HTH-type transcriptional regulator SsuR | 0.72 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.92 | 7 |
| Castellaniella sp019104865 MT123 | 0.37 | ABCV34_RS08230 | | CysB family HTH-type transcriptional regulator | 0.72 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.55 | 20 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS05885 | | LysR substrate-binding domain-containing protein | 0.48 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.97 | 5 |
| Rhodanobacter sp. FW510-T8 | 0.37 | OKGIIK_05975 | lysR | CysB family transcriptional regulator | 0.47 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.35 | LRK55_RS00690 | | LysR substrate-binding domain-containing protein | 0.60 | LRK55_RS07105 | | 3-isopropylmalate dehydratase large subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.35 | LRK54_RS00915 | | LysR substrate-binding domain-containing protein | 0.60 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | low | > 59 |
| Lysobacter sp. OAE881 | 0.34 | ABIE51_RS15850 | | LysR family transcriptional regulator | 0.48 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.94 | 41 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.30 | Xcc-8004.1249.1 | | Transcriptional regulator | 0.84 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 74 |
Not shown: 0 genomes with orthologs for PP_2327 only; 32 genomes with orthologs for PP_1985 only