Conservation of cofitness between PP_2328 and PP_0966 in Pseudomonas putida KT2440

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2328 Phosphoadenosine phosphosulfate reductase 1.0 PP_0966 Histidinol dehydrogenase 0.70 6
Pseudomonas simiae WCS417 0.92 PS417_21125 phosphoadenosine phosphosulfate reductase 0.91 PS417_04420 histidinol dehydrogenase 0.48 39
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS22740 phosphoadenylyl-sulfate reductase 0.92 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.92 PFLU_RS22740 phosphoadenylyl-sulfate reductase 0.92 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas sp. RS175 0.91 PFR28_02935 Phosphoadenosine phosphosulfate reductase 0.90 PFR28_00187 Histidinol dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_00935 phosphoadenosine phosphosulfate reductase 0.92 AO353_05110 histidinol dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin) 0.89 Psyr_4133 histidinol dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin) 0.89 Psyr_4133 histidinol dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_6054 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.90 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_20830 phosphoadenosine phosphosulfate reductase 0.90 AO356_06965 histidinol dehydrogenase 0.62 24
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4125 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.91 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) 0.79 4
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_3812 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.92 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas stutzeri RCH2 0.85 Psest_2328 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase 0.85 Psest_3298 histidinol dehydrogenase — —
Marinobacter adhaerens HP15 0.68 HP15_1853 phosphoadenosine phosphosulfate reductase 0.70 HP15_2428 histidinol dehydrogenase — —
Acinetobacter radioresistens SK82 0.66 MPMX26_00649 Phosphoadenosine phosphosulfate reductase 0.57 MPMX26_02587 Histidinol dehydrogenase low > 36
Castellaniella sp019104865 MT123 0.40 ABCV34_RS14110 phosphoadenylyl-sulfate reductase 0.56 ABCV34_RS11230 histidinol dehydrogenase 0.68 6
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_02550 phosphoadenosine phosphosulfate reductase 0.29 CA264_05030 histidinol dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS15560 phosphoadenosine phosphosulfate reductase 0.63 HSERO_RS20345 histidinol dehydrogenase 0.83 24
Ralstonia solanacearum PSI07 0.35 RPSI07_RS12785 phosphoadenylyl-sulfate reductase 0.63 RPSI07_RS10390 histidinol dehydrogenase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS04945 phosphoadenylyl-sulfate reductase 0.32 ABZR88_RS06880 histidinol dehydrogenase — —
Ralstonia solanacearum GMI1000 0.34 RS_RS12160 phosphoadenylyl-sulfate reductase 0.62 RS_RS14790 histidinol dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS04110 phosphoadenosine phosphosulfate reductase 0.33 CA265_RS03635 histidinol dehydrogenase 0.90 43
Dechlorosoma suillum PS 0.33 Dsui_1984 thioredoxin-dependent adenylylsulfate APS reductase 0.63 Dsui_1411 histidinol dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_0984 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase 0.30 Echvi_2459 histidinol dehydrogenase — —
Bosea sp. OAE506 0.32 ABIE41_RS15375 phosphoadenylyl-sulfate reductase 0.45 ABIE41_RS24015 histidinol dehydrogenase — —
Rhizobium sp. OAE497 0.31 ABIE40_RS04475 phosphoadenylyl-sulfate reductase 0.45 ABIE40_RS02725 histidinol dehydrogenase 0.85 27
Agrobacterium fabrum C58 0.31 Atu0818 phosphoadenosine phosphosulfate reductase 0.44 Atu0537 histidinol dehydrogenase 0.50 51
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_01179 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase 0.38 CCNA_02431 histidinol dehydrogenase low > 67
Caulobacter crescentus NA1000 0.23 CCNA_01179 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase 0.38 CCNA_02431 histidinol dehydrogenase 0.91 21
Phaeobacter inhibens DSM 17395 0.23 PGA1_c20770 phosphoadenosine phosphosulfate reductase CysH 0.46 PGA1_c31190 histidinol dehydrogenase HisD — —
Mycobacterium tuberculosis H37Rv 0.21 Rv2392 Probable 3'-phosphoadenosine 5'-phosphosulfate reductase CysH (PAPS reductase, thioredoxin DEP.) (padops reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) 0.28 Rv1599 Probable histidinol dehydrogenase HisD (HDH) — —
Dinoroseobacter shibae DFL-12 0.21 Dshi_1152 phosphoadenosine phosphosulfate reductase (RefSeq) 0.45 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —
Lysobacter sp. OAE881 0.21 ABIE51_RS15835 phosphoadenylyl-sulfate reductase 0.32 ABIE51_RS13325 histidinol dehydrogenase 0.97 20
Rhodopseudomonas palustris CGA009 0.20 TX73_003880 phosphoadenylyl-sulfate reductase 0.43 TX73_023540 histidinol dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.1256.1 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.35 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) low > 74
Pantoea sp. MT58 0.19 IAI47_04160 phosphoadenylyl-sulfate reductase 0.30 IAI47_07090 histidinol dehydrogenase 0.93 13
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS05895 phosphoadenylyl-sulfate reductase 0.31 ABZR86_RS06730 histidinol dehydrogenase 0.95 24
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS00920 phosphoadenylyl-sulfate reductase 0.31 LRK54_RS01605 histidinol dehydrogenase 0.49 27
Rhodanobacter denitrificans MT42 0.19 LRK55_RS00695 phosphoadenylyl-sulfate reductase 0.31 LRK55_RS01385 histidinol dehydrogenase low > 63
Dickeya dadantii 3937 0.18 DDA3937_RS16935 phosphoadenylyl-sulfate reductase 0.33 DDA3937_RS09735 histidinol dehydrogenase 0.66 44
Serratia liquefaciens MT49 0.18 IAI46_03695 phosphoadenylyl-sulfate reductase 0.30 IAI46_08210 histidinol dehydrogenase low > 86
Magnetospirillum magneticum AMB-1 0.18 AMB_RS11190 phosphoadenylyl-sulfate reductase 0.46 AMB_RS16905 histidinol dehydrogenase — —
Pectobacterium carotovorum WPP14 0.18 HER17_RS04245 phosphoadenylyl-sulfate reductase 0.31 HER17_RS12230 histidinol dehydrogenase 0.90 41
Dickeya dianthicola 67-19 0.18 HGI48_RS17005 phosphoadenylyl-sulfate reductase 0.32 HGI48_RS09745 histidinol dehydrogenase low > 71
Dickeya dianthicola ME23 0.18 DZA65_RS18080 phosphoadenylyl-sulfate reductase 0.32 DZA65_RS10055 histidinol dehydrogenase low > 75
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_05970 cysH phosphoadenylyl-sulfate reductase 0.32 OKGIIK_04950 hisD histidinol dehydrogenase low > 52
Shewanella oneidensis MR-1 0.17 SO3736 cysH phosphoadenosine phosphosulfate reductase (NCBI ptt file) 0.32 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.85 12
Shewanella amazonensis SB2B 0.17 Sama_2837 phosphoadenosine phosphosulfate reductase (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.94 26
Enterobacter sp. TBS_079 0.17 MPMX20_03641 Phosphoadenosine phosphosulfate reductase 0.31 MPMX20_03002 Histidinol dehydrogenase 0.71 16
Erwinia tracheiphila SCR3 0.17 LU632_RS06410 phosphoadenylyl-sulfate reductase 0.31 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Rhodospirillum rubrum S1H 0.17 Rru_A1929 Phosphoadenosine phosphosulfate reductase (NCBI) 0.47 Rru_A2771 Histidinol dehydrogenase (NCBI) — —
Klebsiella michiganensis M5al 0.17 BWI76_RS22755 phosphoadenosine phosphosulfate reductase 0.31 BWI76_RS18925 histidinol dehydrogenase 0.78 23
Rahnella sp. WP5 0.17 EX31_RS07895 phosphoadenylyl-sulfate reductase 0.32 EX31_RS11440 histidinol dehydrogenase 0.96 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF4818 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.32 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) — —
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2851 phosphoadenosine phosphosulfate reductase, thioredoxin dependent 0.31 EX28DRAFT_0539 histidinol dehydrogenase 0.70 27
Escherichia coli ECRC62 0.17 BNILDI_10745 cysH phosphoadenosine phosphosulfate reductase 0.31 BNILDI_14740 hisD Histidinol dehydrogenase — —
Escherichia coli ECOR38 0.17 HEPCGN_19085 cysH phosphoadenosine phosphosulfate reductase 0.32 HEPCGN_03220 hisD Histidinol dehydrogenase low > 85
Escherichia coli ECOR27 0.17 NOLOHH_12195 cysH phosphoadenosine phosphosulfate reductase 0.32 NOLOHH_15830 hisD Histidinol dehydrogenase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_00971 Phosphoadenosine phosphosulfate reductase 0.32 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia coli BL21 0.17 ECD_02607 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent 0.32 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase — —
Escherichia coli ECRC101 0.17 MCAODC_10905 cysH phosphoadenosine phosphosulfate reductase 0.32 MCAODC_20425 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC99 0.17 KEDOAH_07745 cysH phosphoadenosine phosphosulfate reductase 0.32 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC102 0.17 NIAGMN_18150 cysH phosphoadenosine phosphosulfate reductase 0.32 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC98 0.17 JDDGAC_24045 cysH phosphoadenosine phosphosulfate reductase 0.32 JDDGAC_28625 hisD Histidinol dehydrogenase — —
Escherichia coli Nissle 1917 0.17 ECOLIN_RS15400 phosphoadenosine phosphosulfate reductase 0.32 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia coli ECRC101 0.17 OKFHMN_20380 cysH phosphoadenosine phosphosulfate reductase 0.32 OKFHMN_24515 hisD Histidinol dehydrogenase — —
Escherichia coli BW25113 0.17 b2762 cysH phosphoadenosine phosphosulfate reductase (NCBI) 0.32 b2020 hisD histidinol dehydrogenase (NCBI) 0.93 14
Azospirillum sp. SherDot2 0.17 MPMX19_00649 Phosphoadenosine phosphosulfate reductase 0.44 MPMX19_05543 Histidinol dehydrogenase — —
Alteromonas macleodii MIT1002 0.17 MIT1002_03378 Phosphoadenosine phosphosulfate reductase 0.32 MIT1002_02633 Histidinol dehydrogenase — —
Shewanella loihica PV-4 0.17 Shew_0667 phosphoadenosine phosphosulfate reductase (RefSeq) 0.33 Shew_2198 histidinol dehydrogenase (RefSeq) 0.84 48
Synechococcus elongatus PCC 7942 0.16 Synpcc7942_2506 par phosphoadenosine phosphosulfate reductase 0.42 Synpcc7942_1519 hisD histidinol dehydrogenase — —
Escherichia fergusonii Becca 0.16 EFB2_01155 Phosphoadenosine phosphosulfate reductase 0.32 EFB2_01836 Histidinol dehydrogenase low > 86
Kangiella aquimarina DSM 16071 0.16 B158DRAFT_2162 phosphoadenosine phosphosulfate reductase, thioredoxin dependent 0.28 B158DRAFT_2293 histidinol dehydrogenase low > 40
Desulfovibrio vulgaris Hildenborough JW710 0.16 DVU1566 cysD phosphoadenosine phosphosulfate reductase, putative (TIGR) 0.41 DVU0796 hisD histidinol dehydrogenase (TIGR) low > 55

Not shown: 0 genomes with orthologs for PP_2328 only; 28 genomes with orthologs for PP_0966 only