Conservation of cofitness between PP_1985 and PP_0289 in Pseudomonas putida KT2440

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1985 3-isopropylmalate dehydratase large subunit 1.0 PP_0289 Imidazoleglycerol-phosphate dehydratase 0.87 17
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.88 Pf1N1B4_1627 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.81 34
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.85 PfGW456L13_362 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.91 21
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.85 Pf6N2E2_3842 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.76 24
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_20620 isopropylmalate isomerase 0.86 AO353_12070 imidazoleglycerol-phosphate dehydratase 0.90 18
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_21400 isopropylmalate isomerase 0.85 AO356_09815 imidazoleglycerol-phosphate dehydratase 0.86 34
Pseudomonas sp. RS175 0.89 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.85 PFR28_04929 Histidine biosynthesis bifunctional protein HisB 0.61 14
Pseudomonas simiae WCS417 0.89 PS417_18600 isopropylmalate isomerase 0.85 PS417_01560 imidazoleglycerol-phosphate dehydratase 0.64 41
Pseudomonas fluorescens SBW25 0.89 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.85 PFLU_RS01605 imidazoleglycerol-phosphate dehydratase HisB 0.75 12
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.85 PFLU_RS01605 imidazoleglycerol-phosphate dehydratase HisB 0.83 16
Pseudomonas stutzeri RCH2 0.88 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.82 Psest_0152 Imidazoleglycerol-phosphate dehydratase 0.89 15
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.86 Psyr_4897 imidazoleglycerol-phosphate dehydratase 0.85 22
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.86 Psyr_4897 imidazoleglycerol-phosphate dehydratase 0.74 46
Pseudomonas sp. S08-1 0.86 OH686_04480 3-isopropylmalate dehydratase large subunit 0.85 OH686_14575 Imidazoleglycerol-phosphate dehydratase low > 80
Marinobacter adhaerens HP15 0.78 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.77 HP15_3012 imidazoleglycerol-phosphate dehydratase
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit 0.33 B158DRAFT_2289 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 40
Acinetobacter radioresistens SK82 0.72 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.65 MPMX26_02845 Histidine biosynthesis bifunctional protein HisB 0.93 14
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.72 ABZR87_RS02490 imidazoleglycerol-phosphate dehydratase HisB
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS14400 isopropylmalate isomerase 0.69 RR42_RS18905 imidazoleglycerol-phosphate dehydratase
Castellaniella sp019104865 MT123 0.72 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.68 ABCV34_RS11235 imidazoleglycerol-phosphate dehydratase HisB 0.44 30
Ralstonia solanacearum PSI07 0.72 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.71 RPSI07_RS10400 imidazoleglycerol-phosphate dehydratase HisB
Ralstonia solanacearum GMI1000 0.72 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.72 RS_RS14780 imidazoleglycerol-phosphate dehydratase
Ralstonia solanacearum UW163 0.71 UW163_RS11105 3-isopropylmalate dehydratase large subunit 0.72 UW163_RS06780 imidazoleglycerol-phosphate dehydratase
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.72 RALBFv3_RS06835 imidazoleglycerol-phosphate dehydratase
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.73 QEN71_RS27855 imidazoleglycerol-phosphate dehydratase HisB 0.78 37
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.71 H281DRAFT_05655 imidazoleglycerol-phosphate dehydratase
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS33915 isopropylmalate isomerase 0.71 BPHYT_RS17700 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) 0.81 44
Paraburkholderia graminis OAS925 0.71 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.71 ABIE53_003699 imidazoleglycerol-phosphate dehydratase
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS16515 isopropylmalate isomerase 0.73 HSERO_RS20330 imidazoleglycerol-phosphate dehydratase 0.89 22
Variovorax sp. OAS795 0.69 ABID97_RS08465 3-isopropylmalate dehydratase large subunit 0.67 ABID97_RS23140 imidazoleglycerol-phosphate dehydratase HisB
Variovorax sp. SCN45 0.68 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.68 GFF5349 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.66 GFF1312 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
Acidovorax sp. GW101-3H11 0.67 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.66 Ac3H11_4730 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
Azospirillum brasilense Sp245 0.66 AZOBR_RS03545 isopropylmalate isomerase 0.52 AZOBR_RS01665 imidazoleglycerol-phosphate dehydratase 0.90 8
Azospirillum sp. SherDot2 0.66 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.53 MPMX19_02546 Histidine biosynthesis bifunctional protein HisB
Rhodospirillum rubrum S1H 0.66 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) 0.48 Rru_A3597 Imidazoleglycerol-phosphate dehydratase (NCBI)
Dechlorosoma suillum PS 0.66 Dsui_3201 3-isopropylmalate dehydratase, large subunit 0.67 Dsui_1415 imidazoleglycerol-phosphate dehydratase
Sinorhizobium meliloti 1021 0.65 SMc03823 isopropylmalate isomerase large subunit 0.50 SMc02574 imidazoleglycerol-phosphate dehydratase 0.74 75
Agrobacterium fabrum C58 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit 0.49 Atu0043 imidazoleglycerol-phosphate dehydratase 0.83 54
Rhizobium sp. OAE497 0.63 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.49 ABIE40_RS19460 imidazoleglycerol-phosphate dehydratase HisB 0.95 15
Bosea sp. OAE506 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit 0.48 ABIE41_RS03965 imidazoleglycerol-phosphate dehydratase HisB
Magnetospirillum magneticum AMB-1 0.63 AMB_RS20560 3-isopropylmalate dehydratase large subunit 0.50 AMB_RS22940 imidazoleglycerol-phosphate dehydratase
Rhodopseudomonas palustris CGA009 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit 0.42 TX73_001605 imidazoleglycerol-phosphate dehydratase HisB
Caulobacter crescentus NA1000 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.45 CCNA_03850 imidazoleglycerol-phosphate dehydratase 0.97 4
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.45 CCNA_03850 imidazoleglycerol-phosphate dehydratase low > 67
Phaeobacter inhibens DSM 17395 0.59 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.48 PGA1_c09330 imidazoleglycerol-phosphate dehydratase HisB
Dinoroseobacter shibae DFL-12 0.59 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) 0.49 Dshi_0794 Imidazoleglycerol-phosphate dehydratase (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.47 Ga0059261_1044 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.98 25
Mycobacterium tuberculosis H37Rv 0.56 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) 0.34 Rv1601 Probable imidazole glycerol-phosphate dehydratase HisB
Bifidobacterium breve UCC2003 0.54 BBR_RS19630 3-isopropylmalate dehydratase large subunit 0.38 BBR_RS17045 imidazoleglycerol-phosphate dehydratase low > 34
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit 0.52 Synpcc7942_0125 hisB imidazoleglycerol-phosphate dehydratase
Methanococcus maripaludis JJ 0.22 MMJJ_RS06750 homoaconitase large subunit 0.38 MMJJ_RS02175 imidazoleglycerol-phosphate dehydratase HisB
Methanococcus maripaludis S2 0.22 MMP_RS07610 homoaconitase large subunit 0.38 MMP_RS02900 imidazoleglycerol-phosphate dehydratase HisB
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) 0.34 DvMF_3122 Imidazoleglycerol-phosphate dehydratase (RefSeq) 0.88 26
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) 0.38 DVU1040 hisB imidazoleglycerol-phosphate dehydratase (TIGR) 0.82 37

Not shown: 48 genomes with orthologs for PP_1985 only; 0 genomes with orthologs for PP_0289 only