Conservation of cofitness between IAI47_07110 and IAI47_13755 in Pantoea sp. MT58

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_07110 FAD-binding oxidoreductase 1.0 IAI47_13755 succinate dehydrogenase flavoprotein subunit 0.52 4
Serratia liquefaciens MT49 0.78 IAI46_17170 FAD-binding oxidoreductase 0.88 IAI46_06265 succinate dehydrogenase flavoprotein subunit low > 86
Rahnella sp. WP5 0.76 EX31_RS17910 FAD-binding oxidoreductase 0.88 EX31_RS23430 succinate dehydrogenase flavoprotein subunit low > 89
Escherichia coli ECOR38 0.73 HEPCGN_25775 puuB gamma-glutamylputrescine oxidase 0.87 HEPCGN_01295 sdhA succinate dehydrogenase flavoprotein subunit low > 85
Escherichia coli ECRC62 0.73 BNILDI_18260 puuB gamma-glutamylputrescine oxidase 0.87 BNILDI_21320 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli BL21 0.73 ECD_01278 gamma-glutamylputrescine oxidoreductase 0.87 ECD_00683 succinate dehydrogenase, flavoprotein subunit low > 60
Escherichia coli ECOR27 0.73 NOLOHH_20110 puuB gamma-glutamylputrescine oxidase 0.87 NOLOHH_23325 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_02381 Gamma-glutamylputrescine oxidoreductase 0.87 OHPLBJKB_02993 Succinate dehydrogenase flavoprotein subunit low > 73
Escherichia coli BW25113 0.73 b1301 puuB gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding (NCBI) 0.87 b0723 sdhA succinate dehydrogenase flavoprotein subunit (NCBI) low > 76
Escherichia coli ECRC99 0.73 KEDOAH_26350 puuB gamma-glutamylputrescine oxidase 0.87 KEDOAH_21025 sdhA succinate dehydrogenase flavoprotein subunit — —
Klebsiella michiganensis M5al 0.73 BWI76_RS10690 gamma-glutamylputrescine oxidoreductase 0.89 BWI76_RS08405 succinate dehydrogenase flavoprotein subunit low > 92
Escherichia coli ECRC98 0.73 JDDGAC_04970 puuB gamma-glutamylputrescine oxidase 0.87 JDDGAC_10595 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli ECRC101 0.73 MCAODC_15845 puuB gamma-glutamylputrescine oxidase 0.87 MCAODC_26160 sdhA succinate dehydrogenase flavoprotein subunit — —
Enterobacter asburiae PDN3 0.73 EX28DRAFT_1502 Glycine/D-amino acid oxidases (deaminating) 0.89 EX28DRAFT_2268 succinate dehydrogenase subunit A (EC 1.3.5.1) low > 76
Escherichia coli ECRC101 0.73 OKFHMN_02425 puuB gamma-glutamylputrescine oxidase 0.87 OKFHMN_06940 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli ECRC102 0.73 NIAGMN_26595 puuB gamma-glutamylputrescine oxidase 0.87 NIAGMN_04990 sdhA succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_4356 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) 0.67 Pf1N1B4_3679 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_29290 gamma-glutamylputrescine oxidoreductase 0.67 AO353_01845 succinate dehydrogenase — —
Shewanella amazonensis SB2B 0.64 Sama_2638 putative oxidoreductase (RefSeq) 0.77 Sama_1425 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Pseudomonas stutzeri RCH2 0.64 Psest_1966 Glycine/D-amino acid oxidases (deaminating) 0.67 Psest_2496 succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21495 gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) 0.66 AO356_19685 succinate dehydrogenase — —
Pseudomonas simiae WCS417 0.64 PS417_18505 gamma-glutamylputrescine oxidoreductase 0.67 PS417_08885 succinate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS20485 FAD-binding oxidoreductase 0.66 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit — —
Shewanella sp. ANA-3 0.64 Shewana3_3093 FAD dependent oxidoreductase (RefSeq) 0.76 Shewana3_1708 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS20485 FAD-binding oxidoreductase 0.66 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas sp. S08-1 0.64 OH686_22830 Gamma-glutamyl-putrescine oxidase 0.67 OH686_01980 succinate dehydrogenase, flavoprotein subunit — —
Shewanella oneidensis MR-1 0.64 SO1274 conserved hypothetical protein (NCBI ptt file) 0.76 SO1928 sdhA succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) — —
Pseudomonas putida KT2440 0.63 PP_2448 Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) 0.65 PP_4191 succinate dehydrogenase flavoprotein subunit — —
Shewanella loihica PV-4 0.63 Shew_0977 FAD dependent oxidoreductase (RefSeq) 0.76 Shew_1653 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_2427 gamma-glutamylputrescine oxidase 0.69 Psyr_2007 succinate dehydrogenase subunit A — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_2427 gamma-glutamylputrescine oxidase 0.69 Psyr_2007 succinate dehydrogenase subunit A — —
Pseudomonas sp. RS175 0.62 PFR28_02805 Gamma-glutamylputrescine oxidoreductase 0.66 PFR28_03098 Succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3923 Nucleoside-diphosphate-sugar epimerases 0.66 PfGW456L13_4271 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_80 gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) 0.67 Pf6N2E2_5853 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Marinobacter adhaerens HP15 0.60 HP15_944 FAD dependent oxidoreductase 0.67 HP15_1519 succinate dehydrogenase flavoprotein subunit-like protein — —
Agrobacterium fabrum C58 0.54 Atu0194 oxidoreductase 0.47 Atu2643 succinate dehydrogenase flavoprotein subunit — —
Sinorhizobium meliloti 1021 0.50 SMc01972 oxidoreductase 0.46 SMc02465 succinate dehydrogenase flavoprotein subunit — —
Azospirillum sp. SherDot2 0.41 MPMX19_04887 Gamma-glutamylputrescine oxidoreductase 0.48 MPMX19_02409 Succinate dehydrogenase flavoprotein subunit — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS23125 FAD-dependent oxidoreductase 0.56 BPHYT_RS33935 succinate dehydrogenase flavoprotein subunit — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF2043 Glycine/D-amino acid oxidase (deaminating) in putrescine utilization cluster 0.54 GFF3368 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Paraburkholderia graminis OAS925 0.38 ABIE53_001806 gamma-glutamylputrescine oxidase 0.56 ABIE53_004880 succinate dehydrogenase / fumarate reductase flavoprotein subunit — —
Variovorax sp. OAS795 0.37 ABID97_RS12365 FAD-binding oxidoreductase 0.55 ABID97_RS08495 succinate dehydrogenase flavoprotein subunit — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c11510 gamma-glutamylputrescine oxidoreductase PuuB 0.46 PGA1_c03760 succinate dehydrogenase flavoprotein subunit — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS12970 FAD-binding oxidoreductase 0.56 QEN71_RS38670 succinate dehydrogenase flavoprotein subunit — —
Rhodospirillum rubrum S1H 0.36 Rru_A1019 FAD dependent oxidoreductase (NCBI) 0.51 Rru_A1204 Succinate dehydrogenase flavoprotein subunit (NCBI) — —
Dinoroseobacter shibae DFL-12 0.34 Dshi_2227 FAD dependent oxidoreductase (RefSeq) 0.47 Dshi_2865 succinate dehydrogenase, flavoprotein subunit (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.2201.1 glutamine synthetase family protein 0.49 Xcc-8004.2458.1 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1354 Glycine/D-amino acid oxidases (deaminating) 0.71 B158DRAFT_1422 succinate dehydrogenase subunit A (EC 1.3.5.1) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3084 FIG00553873: hypothetical protein 0.87 GFF4637 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) low > 78
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_03229 FAD dependent oxidoreductase 0.48 CCNA_03642 succinate dehydrogenase flavoprotein subunit — —
Caulobacter crescentus NA1000 0.28 CCNA_03229 FAD dependent oxidoreductase 0.48 CCNA_03642 succinate dehydrogenase flavoprotein subunit — —
Rhizobium sp. OAE497 0.27 ABIE40_RS03205 FAD-binding oxidoreductase 0.47 ABIE40_RS18020 succinate dehydrogenase flavoprotein subunit — —
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS05520 FAD-binding oxidoreductase 0.50 ABZR86_RS06335 succinate dehydrogenase flavoprotein subunit — —
Rhodanobacter denitrificans MT42 0.25 LRK55_RS17925 FAD-binding oxidoreductase 0.50 LRK55_RS07215 succinate dehydrogenase flavoprotein subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS18070 FAD-binding oxidoreductase 0.50 LRK54_RS07475 succinate dehydrogenase flavoprotein subunit low > 59
Lysobacter sp. OAE881 0.25 ABIE51_RS09380 FAD-binding oxidoreductase 0.50 ABIE51_RS12520 succinate dehydrogenase flavoprotein subunit — —
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_07230 FAD-dependent oxidoreductase 0.48 OKGIIK_08480 sdhA succinate dehydrogenase flavoprotein subunit — —
Rhodopseudomonas palustris CGA009 0.23 TX73_013660 FAD-dependent oxidoreductase 0.50 TX73_001125 succinate dehydrogenase flavoprotein subunit — —
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS05840 FAD-dependent oxidoreductase 0.55 HSERO_RS14905 succinate dehydrogenase flavoprotein subunit — —
Ralstonia solanacearum GMI1000 0.22 RS_RS17075 FAD-binding oxidoreductase 0.55 RS_RS10020 succinate dehydrogenase flavoprotein subunit — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS08030 FAD-binding oxidoreductase 0.56 RPSI07_RS14675 succinate dehydrogenase flavoprotein subunit — —
Variovorax sp. SCN45 0.22 GFF1857 FIG00553873: hypothetical protein 0.55 GFF3897 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS04700 FAD-binding oxidoreductase 0.56 ABZR87_RS14560 succinate dehydrogenase flavoprotein subunit — —
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS09245 FAD-binding oxidoreductase 0.56 RALBFv3_RS02640 succinate dehydrogenase flavoprotein subunit — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS34300 FAD-dependent oxidoreductase 0.56 RR42_RS14445 fumarate reductase — —
Ralstonia solanacearum UW163 0.22 UW163_RS04345 FAD-binding oxidoreductase 0.56 UW163_RS11085 succinate dehydrogenase flavoprotein subunit — —
Acinetobacter radioresistens SK82 0.21 MPMX26_02004 Gamma-glutamylputrescine oxidoreductase 0.52 MPMX26_00749 Succinate dehydrogenase flavoprotein subunit — —
Alteromonas macleodii MIT1002 0.18 MIT1002_03149 Gamma-glutamylputrescine oxidoreductase 0.80 MIT1002_01946 Succinate dehydrogenase flavoprotein subunit — —
Dickeya dianthicola ME23 0.12 DZA65_RS10240 FAD-dependent oxidoreductase 0.88 DZA65_RS06835 succinate dehydrogenase flavoprotein subunit low > 75
Dickeya dianthicola 67-19 0.12 HGI48_RS09905 FAD-dependent oxidoreductase 0.88 HGI48_RS06490 succinate dehydrogenase flavoprotein subunit low > 71
Castellaniella sp019104865 MT123 0.09 ABCV34_RS06250 FAD-binding oxidoreductase 0.55 ABCV34_RS01695 succinate dehydrogenase flavoprotein subunit — —

Not shown: 2 genomes with orthologs for IAI47_07110 only; 17 genomes with orthologs for IAI47_13755 only