| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pantoea sp. MT58 | 1.0 | IAI47_03795 | | hemolysin III family protein | 1.0 | IAI47_11975 | | transcription-repair coupling factor | 0.26 | 3 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.69 | GFF2997 | | COG1272: Predicted membrane protein hemolysin III homolog | 0.83 | GFF3397 | | Transcription-repair coupling factor | low | > 78 |
| Enterobacter sp. TBS_079 | 0.69 | MPMX20_03758 | | hypothetical protein | 0.82 | MPMX20_01795 | | Transcription-repair-coupling factor | low | > 85 |
| Klebsiella michiganensis M5al | 0.69 | BWI76_RS23840 | | hemolysin III family protein | 0.82 | BWI76_RS11205 | | transcription-repair coupling factor | 0.17 | 80 |
| Enterobacter asburiae PDN3 | 0.69 | EX28DRAFT_2950 | | channel protein, hemolysin III family | 0.83 | EX28DRAFT_1816 | | transcription-repair coupling factor (mfd) | low | > 76 |
| Escherichia coli ECRC101 | 0.69 | MCAODC_10065 | yqfA | hemolysin III family protein | 0.83 | MCAODC_22830 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECRC99 | 0.69 | KEDOAH_08595 | yqfA | hemolysin III family protein | 0.83 | KEDOAH_24285 | mfd | transcription-repair coupling factor | — | — |
| Escherichia fergusonii Becca | 0.69 | EFB2_01002 | | hypothetical protein | 0.83 | EFB2_02861 | | Transcription-repair-coupling factor | low | > 86 |
| Escherichia coli ECRC98 | 0.69 | JDDGAC_23185 | yqfA | hemolysin III family protein | 0.83 | JDDGAC_07130 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECOR27 | 0.69 | NOLOHH_11465 | yqfA | hemolysin III family protein | 0.83 | NOLOHH_20995 | mfd | transcription-repair coupling factor | low | > 57 |
| Escherichia coli ECRC102 | 0.69 | NIAGMN_17310 | yqfA | hemolysin III family protein | 0.83 | NIAGMN_24360 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECRC101 | 0.69 | OKFHMN_19545 | yqfA | hemolysin III family protein | 0.83 | OKFHMN_03470 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli BW25113 | 0.69 | b2899 | yqfA | predicted oxidoreductase, inner membrane subunit (NCBI) | 0.83 | b1114 | mfd | transcription-repair coupling factor (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.69 | BNILDI_10000 | yqfA | hemolysin III family protein | 0.83 | BNILDI_19160 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECOR38 | 0.69 | HEPCGN_18835 | yqfA | hemolysin III family protein | 0.83 | HEPCGN_24015 | mfd | transcription-repair coupling factor | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.69 | OHPLBJKB_00816 | | hypothetical protein | 0.83 | OHPLBJKB_02552 | | Transcription-repair-coupling factor | low | > 73 |
| Escherichia coli BL21 | 0.69 | ECD_02731 | | hemolysin III family HylIII inner membrane protein | 0.83 | ECD_01110 | | transcription-repair coupling factor | low | > 60 |
| Dickeya dadantii 3937 | 0.68 | DDA3937_RS03270 | | hemolysin III family protein | 0.80 | DDA3937_RS13000 | | transcription-repair coupling factor | low | > 74 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_20775 | | hemolysin III family protein | 0.80 | IAI46_10320 | | transcription-repair coupling factor | low | > 86 |
| Rahnella sp. WP5 | 0.66 | EX31_RS21610 | | hemolysin III family protein | 0.80 | EX31_RS24520 | | transcription-repair coupling factor | low | > 89 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS03410 | | hemolysin III family protein | 0.79 | HGI48_RS13065 | | transcription-repair coupling factor | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS17935 | | hemolysin III family protein | 0.81 | HER17_RS08775 | | transcription-repair coupling factor | low | > 75 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS03455 | | hemolysin III family protein | 0.79 | DZA65_RS13530 | | transcription-repair coupling factor | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.60 | CSW01_00205 | | hemolysin III family protein | 0.64 | CSW01_09445 | | transcription-repair coupling factor | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.50 | MIT1002_00886 | | hemolysin | 0.59 | MIT1002_01646 | | Transcription-repair-coupling factor | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.45 | B158DRAFT_1582 | | channel protein, hemolysin III family | 0.51 | B158DRAFT_1800 | | transcription-repair coupling factor | low | > 40 |
| Shewanella loihica PV-4 | 0.45 | Shew_2098 | | hemolysin III family channel protein (RefSeq) | 0.55 | Shew_1630 | | transcription-repair coupling factor (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.44 | SO2447 | | channel protein, hemolysin III family subfamily (NCBI ptt file) | 0.56 | SO2255 | mfd | transcription-repair coupling factor (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_1934 | | hemolysin III family channel protein (RefSeq) | 0.56 | Shewana3_2289 | | transcription-repair coupling factor (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.42 | Sama_1862 | | hemolysin III family channel protein (RefSeq) | 0.54 | Sama_1330 | | transcription-repair coupling factor (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_2974 | | channel protein, hemolysin III family | 0.53 | HP15_2257 | | transcription-repair-coupling factor | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_00606 | | hypothetical protein | 0.47 | MPMX26_01319 | | Transcription-repair-coupling factor | low | > 36 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_00475 | yqfA | putative membrane channel-forming protein YqfA, hemolysin III family | 0.49 | OKGIIK_09105 | mfd | transcription-repair coupling factor | low | > 52 |
| Burkholderia phytofirmans PsJN | 0.38 | BPHYT_RS16440 | | hemolysin D | 0.46 | BPHYT_RS09290 | | helicase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.38 | ABIE53_003461 | | hemolysin III | 0.46 | ABIE53_002095 | | transcription-repair coupling factor (superfamily II helicase) | low | > 113 |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS06145 | | hemolysin III family protein | 0.50 | LRK54_RS02040 | | transcription-repair coupling factor | low | > 59 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_04221 | | hemolysin III | 0.46 | H281DRAFT_00880 | | transcription-repair coupling factor | low | > 103 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.1589.1 | | COG1272: Predicted membrane protein hemolysin III homolog | 0.47 | Xcc-8004.1775.1 | | Transcription-repair coupling factor | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.38 | LRK55_RS05890 | | hemolysin III family protein | 0.50 | LRK55_RS01815 | | transcription-repair coupling factor | low | > 63 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS16230 | | hemolysin III family protein | 0.49 | ABIE51_RS14320 | | transcription-repair coupling factor | 0.36 | 16 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS18160 | | hemolysin III family protein | 0.50 | ABZR86_RS21210 | | transcription-repair coupling factor | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_4296 | | COG1272: Predicted membrane protein hemolysin III homolog | 0.44 | Ac3H11_328 | | Transcription-repair coupling factor | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS02270 | | hemolysin III family protein | 0.46 | QEN71_RS22060 | | transcription-repair coupling factor | low | > 153 |
| Pseudomonas putida KT2440 | 0.34 | PP_4986 | | Channel protein, hemolysin III family | 0.53 | PP_2148 | | transcription-repair coupling factor | low | > 96 |
| Pseudomonas simiae WCS417 | 0.34 | PS417_26570 | | hemolysin III | 0.53 | PS417_07635 | | transcription-repair coupling factor | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.33 | PFLU_RS28225 | | hemolysin III family protein | 0.53 | PFLU_RS07710 | | transcription-repair coupling factor | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.33 | PFLU_RS28225 | | hemolysin III family protein | 0.53 | PFLU_RS07710 | | transcription-repair coupling factor | 0.15 | 69 |
| Pseudomonas fluorescens FW300-N2E2 | 0.33 | Pf6N2E2_4629 | | COG1272: Predicted membrane protein hemolysin III homolog | 0.53 | Pf6N2E2_2278 | | Transcription-repair coupling factor | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS02015 | | hemolysin III family protein | 0.46 | ABZR87_RS13240 | | transcription-repair coupling factor | low | > 80 |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS07605 | | hemolysin III family protein | 0.45 | ABID97_RS17285 | | transcription-repair coupling factor | low | > 91 |
| Pseudomonas sp. RS175 | 0.33 | PFR28_04213 | | hypothetical protein | 0.53 | PFR28_01123 | | Transcription-repair-coupling factor | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.33 | AO356_13560 | | hemolysin III | 0.53 | AO356_02270 | | transcription-repair coupling factor | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_2371 | | COG1272: Predicted membrane protein hemolysin III homolog | 0.53 | Pf1N1B4_3916 | | Transcription-repair coupling factor | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_0452 | | HylII | 0.54 | Psyr_1896 | | transcription-repair coupling factor | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_0452 | | HylII | 0.54 | Psyr_1896 | | transcription-repair coupling factor | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_08075 | | hemolysin III | 0.53 | AO353_00435 | | transcription-repair coupling factor | low | > 101 |
| Sinorhizobium meliloti 1021 | 0.32 | SMc00455 | | hypothetical protein | 0.31 | SMc04450 | | transcription-repair coupling factor | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.32 | RR42_RS36990 | | hemolysin III | 0.45 | RR42_RS07845 | | transcription-repair coupling factor | low | > 128 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_1038 | | COG1272: Predicted membrane protein hemolysin III homolog | 0.53 | PfGW456L13_4027 | | Transcription-repair coupling factor | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.31 | Psest_3779 | | channel protein, hemolysin III family | 0.55 | Psest_1653 | | transcription-repair coupling factor (mfd) | low | > 67 |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_008140 | | hemolysin III family protein | 0.32 | TX73_013805 | | transcription-repair coupling factor | low | > 86 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU3295 | | hemolysin III (TIGR) | 0.26 | DVU1903 | mfd | transcription-repair coupling factor (TIGR) | low | > 55 |
| Agrobacterium fabrum C58 | 0.30 | Atu0906 | | Hemolysin III | 0.31 | Atu1778 | | transcription-repair coupling factor | low | > 89 |
| Variovorax sp. SCN45 | 0.29 | GFF5671 | | FIG01964566: Predicted membrane protein, hemolysin III homolog | 0.45 | GFF412 | | Transcription-repair coupling factor | low | > 127 |
| Pseudomonas sp. S08-1 | 0.29 | OH686_06045 | | Predicted membrane protein, hemolysin III-related | 0.55 | OH686_21990 | | transcription-repair coupling factor | low | > 80 |
| Desulfovibrio vulgaris Miyazaki F | 0.29 | DvMF_2247 | | channel protein, hemolysin III family (RefSeq) | 0.26 | DvMF_0285 | | transcription-repair coupling factor (RefSeq) | — | — |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_02364 | | hypothetical protein | 0.31 | MPMX19_00876 | | Transcription-repair-coupling factor | low | > 112 |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS04960 | | hemolysin III family protein | 0.31 | ABIE40_RS09310 | | transcription-repair coupling factor | low | > 107 |
| Rhodospirillum rubrum S1H | 0.26 | Rru_A0661 | | Hly-III related proteins (NCBI) | 0.32 | Rru_A1726 | | Transcription-repair coupling factor (NCBI) | low | > 58 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.21 | A4249_RS14635 | | hemolysin III family protein | 0.31 | A4249_RS04775 | | transcription-repair coupling factor | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.21 | Dshi_2910 | | Hly-III family protein (RefSeq) | 0.31 | Dshi_1561 | | transcription-repair coupling factor (RefSeq) | low | > 64 |
Not shown: 10 genomes with orthologs for IAI47_03795 only; 17 genomes with orthologs for IAI47_11975 only