Conservation of cofitness between IAI46_05085 and IAI46_25230 in Serratia liquefaciens MT49

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_05085 ammonium transporter AmtB 1.0 IAI46_25230 NAD(P)H-dependent oxidoreductase 0.50 12
Rahnella sp. WP5 0.83 EX31_RS22320 ammonium transporter AmtB 0.86 EX31_RS06025 NAD(P)H-dependent oxidoreductase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF4368 Ammonium transporter 0.83 GFF1741 FIG00553873: hypothetical protein low > 78
Escherichia fergusonii Becca 0.78 EFB2_03606 Ammonia channel 0.84 EFB2_04919 Quinone reductase low > 86
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02700 ammonium transporter AmtB 0.83 ECOLIN_RS21380 class I chromate reductase YieF low > 52
Escherichia coli BL21 0.78 ECD_00403 ammonium transporter 0.84 ECD_03597 chromate reductase, Class I, flavoprotein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03222 Ammonia channel 0.84 OHPLBJKB_04340 Quinone reductase low > 73
Escherichia coli ECRC62 0.78 BNILDI_22610 amtB ammonium transporter AmtB 0.84 BNILDI_04440 yieF class I chromate reductase YieF — —
Escherichia coli ECRC99 0.78 KEDOAH_19705 amtB ammonium transporter AmtB 0.84 KEDOAH_13210 yieF class I chromate reductase YieF — —
Escherichia coli ECRC101 0.78 MCAODC_27485 amtB ammonium transporter AmtB 0.84 MCAODC_05450 yieF class I chromate reductase YieF — —
Escherichia coli BW25113 0.78 b0451 amtB ammonium transporter (NCBI) 0.84 b3713 yieF chromate reductase, Class I, flavoprotein (NCBI) low > 76
Escherichia coli ECOR27 0.78 NOLOHH_01195 amtB ammonium transporter AmtB 0.84 NOLOHH_07090 yieF class I chromate reductase YieF low > 57
Escherichia coli ECOR38 0.78 HEPCGN_06875 amtB ammonium transporter AmtB 0.84 HEPCGN_13645 yieF class I chromate reductase YieF low > 85
Escherichia coli ECRC101 0.78 OKFHMN_08260 amtB ammonium transporter AmtB 0.84 OKFHMN_14940 yieF class I chromate reductase YieF — —
Escherichia coli ECRC102 0.78 NIAGMN_06315 amtB ammonium transporter AmtB 0.84 NIAGMN_12695 yieF class I chromate reductase YieF — —
Escherichia coli ECRC98 0.78 JDDGAC_11915 amtB ammonium transporter AmtB 0.84 JDDGAC_18560 yieF class I chromate reductase YieF — —
Dickeya dianthicola 67-19 0.77 HGI48_RS05745 ammonium transporter AmtB 0.30 HGI48_RS14075 NAD(P)H-dependent oxidoreductase low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS06070 ammonium transporter AmtB 0.30 DZA65_RS14735 NAD(P)H-dependent oxidoreductase low > 75
Klebsiella michiganensis M5al 0.76 BWI76_RS06605 ammonium transporter 0.83 BWI76_RS00105 NAD(P)H-dependent oxidoreductase low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2518 ammonium transporter 0.83 EX28DRAFT_3997 Predicted flavoprotein low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_01043 Ammonia channel 0.83 MPMX20_04646 Quinone reductase low > 85
Dickeya dadantii 3937 0.74 DDA3937_RS05700 ammonium transporter AmtB 0.29 DDA3937_RS14075 NAD(P)H-dependent oxidoreductase low > 74
Ralstonia solanacearum PSI07 0.59 RPSI07_RS22460 ammonia channel protein 0.27 RPSI07_RS06655 NAD(P)H-dependent oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.59 RS_RS01690 ammonium transporter 0.27 RS_RS24320 NAD(P)H-dependent oxidoreductase low > 80
Ralstonia solanacearum UW163 0.58 UW163_RS02730 ammonia channel protein 0.26 UW163_RS18165 NAD(P)H-dependent oxidoreductase — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS10850 ammonia channel protein 0.26 RALBFv3_RS16810 NAD(P)H-dependent oxidoreductase low > 76
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS06700 ammonium transporter 0.32 ABZR87_RS20940 NAD(P)H-dependent oxidoreductase low > 80
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS01760 ammonia channel protein 0.26 RR42_RS12790 ACP phosphodiesterase low > 128
Lysobacter sp. OAE881 0.54 ABIE51_RS01435 ammonium transporter 0.32 ABIE51_RS11315 NADPH-dependent FMN reductase low > 62
Variovorax sp. SCN45 0.54 GFF5119 Ammonium transporter 0.29 GFF1282 Chromate reductase (EC 1.6.5.2) low > 127
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3401 Ammonium transporter 0.19 Ac3H11_4961 NADPH:quinone oxidoreductase low > 79
Variovorax sp. OAS795 0.53 ABID97_RS03635 ammonium transporter 0.42 ABID97_RS19475 NADPH-dependent FMN reductase low > 91
Dechlorosoma suillum PS 0.53 Dsui_0763 ammonium transporter 0.65 Dsui_2815 putative flavoprotein low > 51
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.249.1 Ammonium transporter 0.29 Xcc-8004.3486.1 FIG00553873: hypothetical protein low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1922 Ammonium transporter 0.30 GFF1038 NADPH:quinone oxidoreductase low > 90
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_12705 ammonia channel protein 0.26 AO356_24510 ACP phosphodiesterase low > 104
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_14925 Ammonium transporter 0.30 OKGIIK_14860 ssuE ACP phosphodiesterase low > 52
Sinorhizobium meliloti 1021 0.49 SMc03807 ammonium transporter 0.32 SMc01960 oxidoreductase low > 103
Pseudomonas sp. RS175 0.48 PFR28_04382 Ammonia channel 0.24 PFR28_01559 Quinone reductase low > 88
Rhodospirillum rubrum S1H 0.48 Rru_A1129 Ammonium transporter (NCBI) 0.26 Rru_A3083 NADPH-dependent FMN reductase (NCBI) low > 58
Rhodanobacter denitrificans MT42 0.47 LRK55_RS07860 ammonium transporter 0.30 LRK55_RS07785 NADPH-dependent FMN reductase low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS08110 ammonium transporter 0.30 LRK54_RS08035 NAD(P)H-dependent oxidoreductase low > 59
Rhodopseudomonas palustris CGA009 0.47 TX73_001435 ammonium transporter 0.27 TX73_014865 NAD(P)H-dependent oxidoreductase low > 86
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS09495 ammonium transporter 0.31 ABZR86_RS07505 NAD(P)H-dependent oxidoreductase low > 74
Pseudomonas sp. S08-1 0.46 OH686_13760 Ammonium transporter 0.26 OH686_14895 Chromate reductase low > 80
Azospirillum brasilense Sp245 0.46 AZOBR_RS00845 ammonia channel protein 0.29 AZOBR_RS25610 NADPH-dependent FMN reductase low > 97
Pseudomonas fluorescens SBW25 0.46 PFLU_RS29300 ammonium transporter 0.26 PFLU_RS12955 NAD(P)H-dependent oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS29300 ammonium transporter 0.26 PFLU_RS12955 NAD(P)H-dependent oxidoreductase low > 109
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_09070 ammonia channel protein 0.25 AO353_23580 ACP phosphodiesterase low > 101
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_838 Ammonium transporter 0.27 PfGW456L13_3332 FMN reductase, NADPH-dependent low > 87
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_2167 Ammonium transporter 0.25 Pf1N1B4_4604 FMN reductase, NADPH-dependent low > 87
Bosea sp. OAE506 0.45 ABIE41_RS04755 ammonium transporter 0.27 ABIE41_RS11875 NADPH-dependent FMN reductase low > 77
Paraburkholderia graminis OAS925 0.45 ABIE53_000655 Amt family ammonium transporter 0.31 ABIE53_004655 chromate reductase low > 113
Azospirillum sp. SherDot2 0.44 MPMX19_02223 Ammonia channel 0.26 MPMX19_02391 2-hydroxy-1,4-benzoquinone reductase low > 112
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_02012 ammonium transporter 0.32 H281DRAFT_03602 NAD(P)H-dependent FMN reductase low > 103
Pseudomonas simiae WCS417 0.44 PS417_27615 ammonia channel protein 0.26 PS417_12265 ACP phosphodiesterase low > 88
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0189 ammonium transporter 0.28 Psyr_1767 NADPH-dependent FMN reductase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0189 ammonium transporter 0.28 Psyr_1767 NADPH-dependent FMN reductase low > 86
Pseudomonas putida KT2440 0.43 PP_5233 ammonium transporter AmtB 0.31 PP_4138 Chromate reductase low > 96
Castellaniella sp019104865 MT123 0.41 ABCV34_RS04770 ammonium transporter 0.45 ABCV34_RS00985 NAD(P)H-dependent oxidoreductase low > 48
Caulobacter crescentus NA1000 0.40 CCNA_01399 ammonium transporter/methylammonium transporter 0.25 CCNA_01605 NADPH-dependent FMN reductase family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_01399 ammonium transporter/methylammonium transporter 0.25 CCNA_01605 NADPH-dependent FMN reductase family protein low > 67
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_0866 ammonium transporter (RefSeq) 0.26 DvMF_0156 NADPH-dependent FMN reductase (RefSeq) low > 51
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS09990 ammonium transporter 0.29 A4249_RS00155 NAD(P)H-dependent oxidoreductase low > 48
Phaeobacter inhibens DSM 17395 0.34 PGA1_c14730 ammonia channel 0.30 PGA1_c28990 putative NADPH-dependent FMN reductase low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS18240 ammonium transporter 0.17 ABZR88_RS10355 NADPH-dependent FMN reductase low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS14975 ammonia channel protein 0.35 CA265_RS12800 NAD(P)H-dependent oxidoreductase low > 88
Marinobacter adhaerens HP15 0.18 HP15_274 ammonium/methylammonium permease 0.18 HP15_1678 FMN reductase, NADPH-dependent low > 73
Dinoroseobacter shibae DFL-12 0.17 Dshi_0144 ammonium transporter (RefSeq) 0.24 Dshi_0154 NADPH-dependent FMN reductase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_03200 ammonium transporter 0.14 CSW01_10540 NAD(P)H-dependent oxidoreductase low > 62

Not shown: 29 genomes with orthologs for IAI46_05085 only; 2 genomes with orthologs for IAI46_25230 only