Conservation of cofitness between HSERO_RS23460 and HSERO_RS15435 in Herbaspirillum seropedicae SmR1

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23460 3-methylcrotonyl-CoA carboxylase subunit alpha 1.0 HSERO_RS15435 enoyl-CoA hydratase 0.64 10
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS26895 3-methylcrotonyl-CoA carboxylase 0.42 RR42_RS26900 enoyl-CoA hydratase 0.70 6
Ralstonia solanacearum GMI1000 0.62 RS_RS01300 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.41 RS_RS01310 enoyl-CoA hydratase low > 80
Ralstonia solanacearum PSI07 0.62 RPSI07_RS22860 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.41 RPSI07_RS22845 enoyl-CoA hydratase low > 81
Ralstonia solanacearum UW163 0.62 UW163_RS03120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.41 UW163_RS03110 enoyl-CoA hydratase
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS10460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.41 RALBFv3_RS10470 enoyl-CoA hydratase low > 76
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS06260 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.42 ABZR87_RS06270 enoyl-CoA hydratase/isomerase family protein 0.61 2
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS12855 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.41 QEN71_RS12860 enoyl-CoA hydratase/isomerase family protein 0.97 2
Dechlorosoma suillum PS 0.57 Dsui_0982 acetyl/propionyl-CoA carboxylase, alpha subunit 0.45 Dsui_0981 enoyl-CoA hydratase/carnithine racemase low > 51
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS23275 3-methylcrotonyl-CoA carboxylase subunit alpha 0.42 BPHYT_RS23270 enoyl-CoA hydratase low > 109
Paraburkholderia graminis OAS925 0.56 ABIE53_005468 3-methylcrotonyl-CoA carboxylase alpha subunit 0.42 ABIE53_005467 methylglutaconyl-CoA hydratase low > 113
Acidovorax sp. GW101-3H11 0.55 Ac3H11_3016 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.44 Ac3H11_3014 Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_01343 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.41 H281DRAFT_01344 methylglutaconyl-CoA hydratase
Variovorax sp. SCN45 0.55 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.42 GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) low > 127
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_2507 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.51 B158DRAFT_2508 Enoyl-CoA hydratase/carnithine racemase
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.318.1 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.35 Xcc-8004.2922.1 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.68 10
Variovorax sp. OAS795 0.54 ABID97_RS25115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.44 ABID97_RS25125 enoyl-CoA hydratase/isomerase family protein 0.95 2
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1711 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.43 GFF1713 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.71 47
Acinetobacter radioresistens SK82 0.52 MPMX26_00629 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.41 MPMX26_00630 2,3-dehydroadipyl-CoA hydratase
Azospirillum sp. SherDot2 0.51 MPMX19_03940 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.45 MPMX19_03939 Enoyl-CoA-hydratase low > 112
Marinobacter adhaerens HP15 0.50 HP15_4179 methylcrotonyl-CoA carboxylase, alpha subunit 0.44 HP15_1003 enoyl-CoA hydratase/isomerase
Azospirillum brasilense Sp245 0.50 AZOBR_RS22285 3-methylcrotonyl-CoA carboxylase subunit alpha 0.40 AZOBR_RS22290 enoyl-CoA hydratase
Magnetospirillum magneticum AMB-1 0.49 AMB_RS03465 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.46 AMB_RS03470 enoyl-CoA hydratase low > 64
Alteromonas macleodii MIT1002 0.47 MIT1002_01666 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.46 MIT1002_01667 putative enoyl-CoA hydratase echA8 0.76 24
Pseudomonas putida KT2440 0.47 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha 0.43 PP_4066 methylglutaconyl-CoA hydratase 0.77 3
Pseudomonas sp. RS175 0.46 PFR28_01257 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.42 PFR28_01258 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.68 4
Pseudomonas stutzeri RCH2 0.46 Psest_1080 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.43 Psest_1082 Enoyl-CoA hydratase/carnithine racemase 0.68 3
Pseudomonas sp. S08-1 0.46 OH686_00840 Methylcrotonyl-CoA carboxylase biotin-containing subunit 0.44 OH686_00845 Methylglutaconyl-CoA hydratase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.46 Psyr_2468 Enoyl-CoA hydratase/isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.46 Psyr_2468 Enoyl-CoA hydratase/isomerase low > 86
Shewanella sp. ANA-3 0.46 Shewana3_1669 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) 0.40 Shewana3_1670 methylglutaconyl-CoA hydratase (RefSeq) 0.80 3
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.44 PFLU_RS18975 gamma-carboxygeranoyl-CoA hydratase 0.76 3
Pseudomonas fluorescens SBW25 0.45 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.44 PFLU_RS18975 gamma-carboxygeranoyl-CoA hydratase low > 109
Shewanella loihica PV-4 0.45 Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) 0.39 Shew_2572 enoyl-CoA hydratase/isomerase (RefSeq) 0.72 5
Shewanella oneidensis MR-1 0.45 SO1894 acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) 0.41 SO1895 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) 0.81 2
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3984 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.44 Pf1N1B4_3985 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.42 5
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2194 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.43 Pf6N2E2_2193 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.75 3
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_01595 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.43 AO356_01590 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.68 3
Sinorhizobium meliloti 1021 0.45 SM_b21124 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.32 SM_b21126 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.74 7
Pseudomonas simiae WCS417 0.45 PS417_17030 3-methylcrotonyl-CoA carboxylase 0.44 PS417_17025 gamma-carboxygeranoyl-CoA hydratase
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_20335 3-methylcrotonyl-CoA carboxylase 0.43 AO353_20340 gamma-carboxygeranoyl-CoA hydratase 0.37 10
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2588 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.42 PfGW456L13_2589 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.53 24
Shewanella amazonensis SB2B 0.45 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.43 Sama_1360 enoyl-CoA hydratase/isomerase (RefSeq) 0.43 4
Rhizobium sp. OAE497 0.45 ABIE40_RS20775 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.35 ABIE40_RS20765 crotonase/enoyl-CoA hydratase family protein 0.80 6
Lysobacter sp. OAE881 0.43 ABIE51_RS13200 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.42 ABIE51_RS13190 enoyl-CoA hydratase-related protein
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.30 CCNA_02251 methylglutaconyl-CoA hydratase low > 67
Caulobacter crescentus NA1000 0.43 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.30 CCNA_02251 methylglutaconyl-CoA hydratase
Phaeobacter inhibens DSM 17395 0.43 PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha 0.35 PGA1_c10360 putative enoyl-CoA hydratase
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_09335 3-methylcrotonyl-CoA carboxylase 0.40 OKGIIK_09325 Enoyl-CoA hydratase
Rhodanobacter denitrificans MT42 0.42 LRK55_RS02035 biotin carboxylase N-terminal domain-containing protein 0.41 LRK55_RS02030 enoyl-CoA hydratase-related protein
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS02280 ATP-grasp domain-containing protein 0.41 LRK54_RS02275 enoyl-CoA hydratase-related protein low > 59
Rhodospirillum rubrum S1H 0.41 Rru_A1941 acyl-CoA carboxylase alpha chain (NCBI) 0.41 Rru_A1942 Enoyl-CoA hydratase/isomerase (NCBI) low > 58
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS20625 biotin carboxylase N-terminal domain-containing protein 0.44 ABZR86_RS20610 enoyl-CoA hydratase-related protein
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS03810 biotin carboxylase N-terminal domain-containing protein 0.35 A4249_RS03800 enoyl-CoA hydratase-related protein
Dinoroseobacter shibae DFL-12 0.39 Dshi_1301 Carbamoyl-phosphate synthase L chain ATP-binding (RefSeq) 0.28 Dshi_1304 Enoyl-CoA hydratase/isomerase (RefSeq) low > 64
Mycobacterium tuberculosis H37Rv 0.38 Rv2501c Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA1: biotin carboxylase + biotin carboxyl carrier protein (BCCP) 0.21 Rv0971c Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) low > 58

Not shown: 5 genomes with orthologs for HSERO_RS23460 only; 1 genomes with orthologs for HSERO_RS15435 only