Conservation of cofitness between HSERO_RS01325 and HSERO_RS10870 in Herbaspirillum seropedicae SmR1

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01325 cation/multidrug efflux protein 1.0 HSERO_RS10870 methionine aminopeptidase 0.36 15
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.71 H281DRAFT_00609 methionine aminopeptidase, type I low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_002354 multidrug efflux pump 0.71 ABIE53_002506 methionyl aminopeptidase low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS07190 efflux RND transporter permease subunit 0.79 QEN71_RS06415 type I methionyl aminopeptidase low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS11375 acriflavin resistance protein 0.70 BPHYT_RS12145 methionine aminopeptidase low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.62 PFLU_RS06270 type I methionyl aminopeptidase
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.62 PFLU_RS06270 type I methionyl aminopeptidase
Pseudomonas stutzeri RCH2 0.50 Psest_1566 Cation/multidrug efflux pump 0.63 Psest_2844 methionine aminopeptidase, type I
Pseudomonas simiae WCS417 0.50 PS417_06115 multidrug transporter AcrB 0.62 PS417_06205 methionine aminopeptidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16365 multidrug transporter AcrB 0.62 AO353_16455 methionine aminopeptidase
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4730 RND efflux transporter 0.62 PfGW456L13_4710 Methionine aminopeptidase (EC 3.4.11.18)
Pseudomonas sp. S08-1 0.49 OH686_06740 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.64 OH686_06490 methionine aminopeptidase, type I
Dechlorosoma suillum PS 0.49 Dsui_0408 cation/multidrug efflux pump 0.74 Dsui_2695 methionine aminopeptidase, type I 0.71 17
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3063 RND efflux transporter 0.62 Pf1N1B4_3082 Methionine aminopeptidase (EC 3.4.11.18)
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06130 multidrug transporter AcrB 0.63 AO356_06045 methionine aminopeptidase
Pseudomonas putida KT2440 0.49 PP_1517 RND efflux transporter 0.64 PP_1590 methionine aminopeptidase
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3091 RND efflux transporter 0.62 Pf6N2E2_3071 Methionine aminopeptidase (EC 3.4.11.18)
Acinetobacter radioresistens SK82 0.49 MPMX26_03010 Cobalt-zinc-cadmium resistance protein CzcA 0.57 MPMX26_02113 Methionine aminopeptidase low > 36
Pseudomonas sp. RS175 0.49 PFR28_00379 Cobalt-zinc-cadmium resistance protein CzcA 0.63 PFR28_00395 Methionine aminopeptidase
Azospirillum sp. SherDot2 0.48 MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA 0.53 MPMX19_00187 Methionine aminopeptidase low > 112
Ralstonia solanacearum UW163 0.46 UW163_RS14695 AcrB/AcrD/AcrF family protein 0.75 UW163_RS13700 type I methionyl aminopeptidase
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01385 AcrB/AcrD/AcrF family protein 0.75 RALBFv3_RS00370 type I methionyl aminopeptidase
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13180 efflux RND transporter permease subunit 0.75 ABZR87_RS11820 type I methionyl aminopeptidase
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07915 multidrug transporter AcrB 0.75 RR42_RS11880 methionine aminopeptidase
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16100 AcrB/AcrD/AcrF family protein 0.75 RPSI07_RS17105 type I methionyl aminopeptidase
Ralstonia solanacearum GMI1000 0.46 RS_RS08335 AcrB/AcrD/AcrF family protein 0.75 RS_RS07040 type I methionyl aminopeptidase
Rhodopseudomonas palustris CGA009 0.44 TX73_022880 efflux RND transporter permease subunit 0.45 TX73_002015 type I methionyl aminopeptidase
Acidovorax sp. GW101-3H11 0.43 Ac3H11_933 Probable transmembrane drug efflux protein 0.63 Ac3H11_538 Methionine aminopeptidase (EC 3.4.11.18)
Variovorax sp. SCN45 0.43 GFF493 RND efflux system, inner membrane transporter 0.64 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS17615 efflux RND transporter permease subunit 0.64 ABID97_RS15670 type I methionyl aminopeptidase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4033 Probable transmembrane drug efflux protein 0.65 GFF4564 Methionine aminopeptidase (EC 3.4.11.18) low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0346 Acriflavin resistance protein 0.62 Psyr_1342 methionine aminopeptidase, type I low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0346 Acriflavin resistance protein 0.62 Psyr_1342 methionine aminopeptidase, type I low > 86
Rhizobium sp. OAE497 0.42 ABIE40_RS17045 efflux RND transporter permease subunit 0.46 ABIE40_RS08625 type I methionyl aminopeptidase low > 107
Sinorhizobium meliloti 1021 0.42 SM_b20345 efflux protein 0.47 SMc00298 methionine aminopeptidase low > 103
Agrobacterium fabrum C58 0.40 Atu5381 AcrB/AcrD/AcrF family protein 0.49 Atu1606 methionine aminopeptidase
Pectobacterium carotovorum WPP14 0.38 HER17_RS07500 efflux RND transporter permease subunit 0.55 HER17_RS16340 type I methionyl aminopeptidase
Bosea sp. OAE506 0.38 ABIE41_RS18635 efflux RND transporter permease subunit 0.46 ABIE41_RS13820 type I methionyl aminopeptidase low > 77
Dickeya dianthicola ME23 0.38 DZA65_RS08250 efflux RND transporter permease subunit 0.56 DZA65_RS05450 type I methionyl aminopeptidase
Rahnella sp. WP5 0.38 EX31_RS17700 efflux RND transporter permease subunit 0.55 EX31_RS13040 type I methionyl aminopeptidase low > 89
Dickeya dadantii 3937 0.37 DDA3937_RS04730 efflux RND transporter permease subunit 0.56 DDA3937_RS05110 type I methionyl aminopeptidase
Dickeya dianthicola 67-19 0.35 HGI48_RS07915 efflux RND transporter permease subunit 0.55 HGI48_RS05110 type I methionyl aminopeptidase
Klebsiella michiganensis M5al 0.35 BWI76_RS05720 cation/multidrug efflux pump 0.58 BWI76_RS05205 type I methionyl aminopeptidase low > 92
Enterobacter sp. TBS_079 0.35 MPMX20_02160 Nickel and cobalt resistance protein CnrA 0.56 MPMX20_00852 Methionine aminopeptidase
Pantoea sp. MT58 0.35 IAI47_21725 efflux RND transporter permease subunit 0.56 IAI47_15535 type I methionyl aminopeptidase low > 76
Enterobacter asburiae PDN3 0.35 EX28DRAFT_1393 Cation/multidrug efflux pump 0.56 EX28DRAFT_3755 methionine aminopeptidase, type I
Azospirillum brasilense Sp245 0.34 AZOBR_RS32765 multidrug transporter 0.56 AZOBR_RS04405 methionine aminopeptidase 0.34 31
Caulobacter crescentus NA1000 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.52 CCNA_02759 methionine aminopeptidase
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.52 CCNA_02759 methionine aminopeptidase
Marinobacter adhaerens HP15 0.33 HP15_1118 transporter, AcrB/D/F family 0.60 HP15_1164 methionine aminopeptidase, type I
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08410 AcrB/AcrD/AcrF family protein 0.51 CSW01_11515 type I methionyl aminopeptidase
Shewanella sp. ANA-3 0.26 Shewana3_3849 acriflavin resistance protein (RefSeq) 0.51 Shewana3_2816 methionine aminopeptidase (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_0466 acriflavin resistance protein (RefSeq) 0.49 Shew_2636 methionine aminopeptidase (RefSeq)
Alteromonas macleodii MIT1002 0.25 MIT1002_01561 Swarming motility protein SwrC 0.61 MIT1002_01002 Methionine aminopeptidase
Shewanella amazonensis SB2B 0.25 Sama_0675 AcrB/AcrD/AcrF family transporter (RefSeq) 0.50 Sama_1138 methionine aminopeptidase (RefSeq)
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS05555 efflux RND transporter permease subunit 0.42 HMPREF1181_RS16560 type I methionyl aminopeptidase low > 56
Bacteroides ovatus ATCC 8483 0.23 BACOVA_04448 putative ATP synthase F0, A subunit 0.45 BACOVA_02261 methionine aminopeptidase, type I low > 94
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS01920 efflux RND transporter permease subunit 0.46 HMPREF1078_RS10540 type I methionyl aminopeptidase low > 61
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS07120 efflux RND transporter permease subunit 0.42 HMPREF1058_RS04125 type I methionyl aminopeptidase low > 67
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS21010 efflux RND transporter permease subunit 0.42 ABI39_RS17095 type I methionyl aminopeptidase low > 72
Fusobacterium nucleatum SB010 0.21 HUW76_07495 efflux RND transporter permease subunit 0.38 HUW76_03750 type I methionyl aminopeptidase
Phaeobacter inhibens DSM 17395 0.21 PGA1_c24610 integral membrane protein, AcrB/AcrD/AcrF family 0.47 PGA1_c29230 methionine aminopeptidase Map
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_20140 acriflavin resistance protein 0.35 CA264_19450 type I methionyl aminopeptidase low > 74
Shewanella oneidensis MR-1 0.15 SO3279 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.51 SO1627 map methionine aminopeptidase, type I (NCBI ptt file)

Not shown: 5 genomes with orthologs for HSERO_RS01325 only; 28 genomes with orthologs for HSERO_RS10870 only