Conservation of cofitness between HER17_RS02810 and HER17_RS21300 in Pectobacterium carotovorum WPP14

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02810 peroxide stress protein YaaA 1.0 HER17_RS21300 oligopeptidase A 0.85 11
Dickeya dadantii 3937 0.84 DDA3937_RS18400 peroxide stress protein YaaA 0.85 DDA3937_RS21265 oligopeptidase A low > 74
Escherichia fergusonii Becca 0.82 EFB2_04037 Peroxide stress resistance protein YaaA 0.85 EFB2_00317 Oligopeptidase A low > 86
Escherichia coli Nissle 1917 0.82 ECOLIN_RS00035 peroxide stress protein YaaA 0.84 ECOLIN_RS19985 oligopeptidase A low > 55
Enterobacter sp. TBS_079 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA 0.85 MPMX20_04397 Oligopeptidase A low > 85
Dickeya dianthicola ME23 0.82 DZA65_RS19470 peroxide stress protein YaaA 0.85 DZA65_RS00035 oligopeptidase A low > 75
Escherichia coli ECOR38 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA 0.85 HEPCGN_15325 prlC oligopeptidase A low > 87
Escherichia coli ECRC99 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA 0.85 KEDOAH_11730 prlC oligopeptidase A — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03654 hypothetical protein 0.85 OHPLBJKB_00205 Oligopeptidase A low > 73
Escherichia coli ECRC98 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA 0.85 JDDGAC_20045 prlC oligopeptidase A low > 86
Escherichia coli ECRC101 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA 0.85 MCAODC_06930 prlC oligopeptidase A low > 87
Escherichia coli ECRC102 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA 0.85 NIAGMN_14180 prlC oligopeptidase A — —
Escherichia coli ECRC100 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA 0.85 OKFHMN_16415 prlC oligopeptidase A low > 80
Dickeya dianthicola 67-19 0.82 HGI48_RS18330 peroxide stress protein YaaA 0.85 HGI48_RS00045 oligopeptidase A low > 71
Escherichia coli BL21 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.85 ECD_03347 oligopeptidase A low > 61
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria 0.84 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Escherichia coli ECRC62 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA 0.85 BNILDI_03210 prlC oligopeptidase A low > 75
Escherichia coli BW25113 0.81 b0006 yaaA hypothetical protein (NCBI) 0.85 b3498 prlC oligopeptidase A (NCBI) low > 76
Escherichia coli ECOR27 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA 0.85 NOLOHH_08350 prlC oligopeptidase A low > 75
Serratia liquefaciens MT49 0.80 IAI46_03045 peroxide stress protein YaaA 0.86 IAI46_24210 oligopeptidase A low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS04260 peroxide stress protein YaaA 0.84 BWI76_RS26610 oligopeptidase A 0.12 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1081 UPF0246 protein YaaA 0.85 GFF517 Oligopeptidase A (EC 3.4.24.70) low > 78
Pantoea sp. MT58 0.79 IAI47_16200 peroxide stress protein YaaA 0.84 IAI47_01345 oligopeptidase A low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS02625 yaaA peroxide stress protein YaaA 0.84 LU632_RS19470 prlC oligopeptidase A low > 74
Rahnella sp. WP5 0.76 EX31_RS03930 peroxide stress protein YaaA 0.83 EX31_RS05165 oligopeptidase A low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11930 peroxide stress protein YaaA 0.71 CSW01_01010 oligopeptidase A 0.53 5
Marinobacter adhaerens HP15 0.69 HP15_1223 protein YaaA 0.57 HP15_3759 oligopeptidase A-like protein low > 73
Acinetobacter radioresistens SK82 0.68 MPMX26_02017 Peroxide stress resistance protein YaaA 0.45 MPMX26_02685 Oligopeptidase A low > 36
Pseudomonas putida KT2440 0.67 PP_1289 conserved protein of unknown function, DUF328 family 0.56 PP_0096 oligopeptidase A low > 96
Pseudomonas sp. RS175 0.67 PFR28_03554 Peroxide stress resistance protein YaaA 0.56 PFR28_04699 Oligopeptidase A low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17320 hypothetical protein 0.55 AO356_11120 oligopeptidase A low > 104
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04675 hypothetical protein 0.55 AO353_10775 oligopeptidase A low > 101
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_1686 UPF0246 protein YaaA 0.55 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5389 UPF0246 protein YaaA 0.56 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) low > 103
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_981 UPF0246 protein YaaA 0.55 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1064 Protein of unknown function DUF328 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1064 Protein of unknown function DUF328 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas simiae WCS417 0.65 PS417_04850 hypothetical protein 0.55 PS417_00245 oligopeptidase A low > 88
Pseudomonas stutzeri RCH2 0.64 Psest_3173 Uncharacterized protein conserved in bacteria 0.55 Psest_4320 Zn-dependent oligopeptidases low > 67
Shewanella loihica PV-4 0.64 Shew_1093 hypothetical protein (RefSeq) 0.66 Shew_3657 oligopeptidase A (RefSeq) low > 60
Pseudomonas sp. S08-1 0.64 OH686_07085 UPF0246 protein YaaA 0.54 OH686_12360 Oligopeptidase A low > 80
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.55 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.55 PFLU_RS00240 oligopeptidase A 0.12 92
Shewanella amazonensis SB2B 0.63 Sama_0917 hypothetical protein (RefSeq) 0.64 Sama_3546 oligopeptidase A (RefSeq) low > 62
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14635 peroxide stress protein YaaA 0.45 ABZR87_RS13490 M3 family metallopeptidase low > 80
Alteromonas macleodii MIT1002 0.60 MIT1002_03077 hypothetical protein 0.63 MIT1002_03633 Oligopeptidase A low > 70
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14595 peroxide stress protein YaaA 0.45 RPSI07_RS15795 oligopeptidase A low > 81
Ralstonia solanacearum UW163 0.59 UW163_RS11005 peroxide stress protein YaaA 0.46 UW163_RS15000 oligopeptidase A — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02720 peroxide stress protein YaaA 0.46 RALBFv3_RS01690 oligopeptidase A low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS10095 peroxide stress protein YaaA 0.45 RS_RS08035 oligopeptidase A low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) 0.47 ABIE53_002798 oligopeptidase A low > 113
Shewanella sp. ANA-3 0.58 Shewana3_3143 hypothetical protein (RefSeq) 0.65 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Dechlorosoma suillum PS 0.58 Dsui_2322 hypothetical protein 0.47 Dsui_0046 Zn-dependent oligopeptidase low > 51
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04599 hypothetical protein 0.46 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A low > 103
Shewanella oneidensis MR-1 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06780 hypothetical protein 0.47 BPHYT_RS12875 oligopeptidase A low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24000 peroxide stress protein YaaA 0.47 QEN71_RS05695 M3 family metallopeptidase low > 153
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS05780 hypothetical protein 0.45 RR42_RS07340 oligopeptidase A low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF720 UPF0246 protein YaaA 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) low > 90
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1593 UPF0246 protein YaaA 0.43 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) low > 79
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_03496 hypothetical protein 0.21 CCNA_03816 peptidyl-dipeptidase DCP low > 67
Caulobacter crescentus NA1000 0.48 CCNA_03496 hypothetical protein 0.21 CCNA_03816 peptidyl-dipeptidase DCP low > 66
Variovorax sp. SCN45 0.48 GFF6020 UPF0246 protein YaaA 0.43 GFF963 Oligopeptidase A (EC 3.4.24.70) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS07905 peroxide stress protein YaaA 0.44 ABID97_RS14080 M3 family metallopeptidase low > 91
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_0335 Uncharacterized protein conserved in bacteria 0.33 Echvi_2572 Zn-dependent oligopeptidases low > 79
Castellaniella sp019104865 MT123 0.47 ABCV34_RS01170 peroxide stress protein YaaA 0.42 ABCV34_RS04180 M3 family metallopeptidase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS06085 peroxide stress protein YaaA 0.19 A4249_RS12525 M3 family metallopeptidase low > 48
Dinoroseobacter shibae DFL-12 0.43 Dshi_3333 protein of unknown function DUF328 (RefSeq) 0.24 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.43 PGA1_c31890 Uncharacterized protein conserved in bacteria 0.25 PGA1_c26590 peptidyl-dipeptidase Dcp low > 62
Bacteroides thetaiotaomicron VPI-5482 0.31 BT3869 conserved hypothetical protein (NCBI ptt file) 0.33 BT4262 peptidyl-dipeptidase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.30 BACOVA_00355 hypothetical protein 0.33 BACOVA_05095 peptidase family M3 low > 94
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS09820 peroxide stress protein YaaA 0.30 HMPREF1078_RS14650 M3 family metallopeptidase low > 61
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS02925 peroxide stress protein YaaA 0.33 HMPREF1058_RS17165 M3 family metallopeptidase low > 67
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS02240 peroxide stress protein YaaA 0.33 ABI39_RS13165 M3 family metallopeptidase low > 72
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS06535 peroxide stress protein YaaA 0.33 HMPREF1181_RS06150 M3 family metallopeptidase low > 56

Not shown: 0 genomes with orthologs for HER17_RS02810 only; 17 genomes with orthologs for HER17_RS21300 only