Conservation of cofitness between HER17_RS01910 and HER17_RS20635 in Pectobacterium carotovorum WPP14

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS20635 acetylornithine deacetylase 0.96 2
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.86 DDA3937_RS20355 acetylornithine deacetylase 0.89 2
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.86 DZA65_RS00930 acetylornithine deacetylase 0.92 2
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.86 HGI48_RS00870 acetylornithine deacetylase low > 71
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.82 IAI46_24520 acetylornithine deacetylase low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.85 BWI76_RS00840 acetylornithine deacetylase low > 92
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.86 EX31_RS14195 acetylornithine deacetylase 0.75 89
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.86 ECD_03842 acetylornithine deacetylase 0.63 3
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.86 NOLOHH_05735 argE acetylornithine deacetylase low > 75
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.84 IAI47_00900 acetylornithine deacetylase 0.79 10
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.85 EFB2_04657 Acetylornithine deacetylase low > 86
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.86 MPMX20_04523 Acetylornithine deacetylase 0.62 14
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.86 b3957 argE acetylornithine deacetylase (NCBI) 0.50 6
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 BNILDI_05790 argE acetylornithine deacetylase low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 ECOLIN_RS22840 acetylornithine deacetylase low > 55
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.86 HEPCGN_12235 argE acetylornithine deacetylase 0.64 70
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 KEDOAH_14570 argE acetylornithine deacetylase — —
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 NIAGMN_11340 argE acetylornithine deacetylase — —
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 MCAODC_04090 argE acetylornithine deacetylase low > 87
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 JDDGAC_17215 argE acetylornithine deacetylase low > 86
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.85 OKFHMN_13590 argE acetylornithine deacetylase 0.85 41
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.85 GFF2343 Acetylornithine deacetylase (EC 3.5.1.16) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.86 OHPLBJKB_04093 Acetylornithine deacetylase low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.86 EX28DRAFT_4419 acetylornithine deacetylase (ArgE) 0.71 30
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.80 LU632_RS19620 argE acetylornithine deacetylase 0.85 27
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.46 Psyr_0253 acetylornithine deacetylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.46 Psyr_0253 acetylornithine deacetylase low > 86
Pseudomonas sp. S08-1 0.67 OH686_21290 Succinylornithine transaminase 0.46 OH686_11125 acetylornithine deacetylase (ArgE) low > 80
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.47 Pf6N2E2_4496 Acetylornithine deacetylase (EC 3.5.1.16) low > 103
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.47 PP_5186 acetylornithine deacetylase low > 96
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18725 acetylornithine aminotransferase 0.46 AO356_13080 acetylornithine deacetylase low > 104
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.46 PfGW456L13_912 Acetylornithine deacetylase (EC 3.5.1.16) low > 87
Pseudomonas simiae WCS417 0.66 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.47 PS417_27200 acetylornithine deacetylase low > 88
Pseudomonas stutzeri RCH2 0.66 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.47 Psest_4001 acetylornithine deacetylase (ArgE) low > 67
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.46 PFLU_RS28860 acetylornithine deacetylase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.46 PFLU_RS28860 acetylornithine deacetylase low > 109
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.46 Pf1N1B4_2242 Acetylornithine deacetylase (EC 3.5.1.16) low > 87
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.45 AO353_08690 acetylornithine deacetylase low > 101
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.59 Shew_0201 acetylornithine deacetylase (RefSeq) low > 60
Pseudomonas sp. RS175 0.65 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.47 PFR28_04309 Acetylornithine deacetylase low > 88
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.58 Sama_0255 acetylornithine deacetylase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.56 CSW01_13385 acetylornithine deacetylase 0.36 38
Paraburkholderia graminis OAS925 0.61 ABIE53_001769 succinylornithine aminotransferase 0.23 ABIE53_001520 acetylornithine deacetylase low > 113
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS07695 acetylornithine aminotransferase 0.22 BPHYT_RS11720 acetylornithine deacetylase — —
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS23375 aspartate aminotransferase family protein 0.22 QEN71_RS11205 acetylornithine deacetylase — —
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.22 H281DRAFT_04940 acetylornithine deacetylase low > 103
Marinobacter adhaerens HP15 0.60 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.48 HP15_3315 acetylornithine deacetylase (ArgE) low > 73
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.11 ABZR86_RS08710 N-acetylcitrulline deacetylase (EC 3.5.1.-) (from data) low > 74
Bosea sp. OAE506 0.44 ABIE41_RS04340 aspartate aminotransferase family protein 0.23 ABIE41_RS04320 acetylornithine deacetylase — —
Agrobacterium fabrum C58 0.42 Atu0428 acetylornithine aminotransferase 0.22 Atu3398 acetylornithine deacetylase — —
Rhizobium sp. OAE497 0.42 ABIE40_RS02320 aspartate aminotransferase family protein 0.21 ABIE40_RS24525 acetylornithine deacetylase low > 107
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.20 CCNA_03746 acetylornithine deacetylase low > 67
Caulobacter crescentus NA1000 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.20 CCNA_03746 acetylornithine deacetylase low > 66
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.23 Ga0059261_1675 acetylornithine deacetylase (ArgE) low > 68
Azospirillum brasilense Sp245 0.40 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.21 AZOBR_RS31030 acetylornithine deacetylase — —
Magnetospirillum magneticum AMB-1 0.40 AMB_RS01605 aspartate aminotransferase family protein 0.23 AMB_RS11990 acetylornithine deacetylase low > 64
Sinorhizobium meliloti 1021 0.39 SMc02138 acetylornithine transaminase 0.21 SMa1836 acetylornithine deacetylase low > 103
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24230 acetylornithine aminotransferase ArgD 0.24 PGA1_c07830 acetylornithine deacetylase ArgE low > 62
Ralstonia solanacearum UW163 0.34 UW163_RS09005 acetylornithine transaminase 0.22 UW163_RS14760 acetylornithine deacetylase — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS04665 acetylornithine transaminase 0.22 RALBFv3_RS01450 acetylornithine deacetylase — —
Mycobacterium tuberculosis H37Rv 0.34 Rv1655 Probable acetylornithine aminotransferase ArgD 0.07 Rv1202 Probable succinyl-diaminopimelate desuccinylase DapE — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12095 acetylornithine transaminase 0.11 ABCV34_RS06085 M20/M25/M40 family metallo-hydrolase — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS00285 acetylornithine transaminase 0.22 ABZR87_RS13245 acetylornithine deacetylase low > 80
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS16955 acetylornithine aminotransferase 0.21 RR42_RS07840 acetylornithine deacetylase — —
Acidovorax sp. GW101-3H11 0.33 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.19 Ac3H11_4519 Acetylornithine deacetylase (EC 3.5.1.16) — —
Ralstonia solanacearum GMI1000 0.32 RS_RS12225 aspartate aminotransferase family protein 0.22 RS_RS08270 acetylornithine deacetylase — —
Variovorax sp. OAS795 0.31 ABID97_RS08635 aspartate aminotransferase family protein 0.20 ABID97_RS04175 acetylornithine deacetylase — —
Variovorax sp. SCN45 0.31 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11) 0.21 GFF543 Uncharacterized deacetylase PA5390 — —
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS12615 ornithine--oxo-acid transaminase 0.11 HMPREF1078_RS05835 M20 family metallo-hydrolase low > 61
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS03445 aspartate aminotransferase family protein 0.11 HMPREF1181_RS02880 M20 family metallo-hydrolase 0.99 1
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.09 BT3549 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) 0.90 4
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03588 aminotransferase, class III 0.10 BACOVA_03358 peptidase dimerization domain protein 0.96 7

Not shown: 29 genomes with orthologs for HER17_RS01910 only; 2 genomes with orthologs for HER17_RS20635 only