Conservation of cofitness between HER17_RS01910 and HER17_RS04240 in Pectobacterium carotovorum WPP14

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.77 18
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.87 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.78 25
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.87 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.78 25
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.87 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.84 16
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.87 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.67 74
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.84 BWI76_RS22760 sulfite reductase subunit beta 0.68 37
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.85 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.85 54
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.84 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.62 76
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.84 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component low > 86
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.84 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 0.41 53
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.75 18
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.85 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.55 47
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.84 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 0.44 57
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.52 48
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.63 76
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.88 19
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 86
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.84 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.82 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.84 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.85 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.85 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component 0.68 47
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.83 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 74
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.06 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region 0.40 18
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.06 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region low > 86
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.06 Pf6N2E2_2073 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18725 acetylornithine aminotransferase 0.06 AO356_00555 sulfite reductase 0.30 43
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.06 PP_2371 Sulphite reductase hemoprotein, beta subunit 0.25 45
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.06 PfGW456L13_2843 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 87
Pseudomonas simiae WCS417 0.66 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.06 PS417_12290 sulfite reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.06 PFLU_RS12980 nitrite/sulfite reductase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.06 PFLU_RS12980 nitrite/sulfite reductase low > 109
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.06 Pf1N1B4_5665 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.06 AO353_22800 sulfite reductase 0.29 56
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.57 Shew_0666 sulfite reductase subunit beta (RefSeq) low > 60
Pseudomonas sp. RS175 0.65 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.06 PFR28_01366 Sulfite reductase [ferredoxin] low > 88
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.58 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) 0.72 46
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.71 Sama_2838 sulfite reductase subunit beta (RefSeq) 0.60 26
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.76 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.59 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.91 4
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.74 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 62
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.48 B158DRAFT_2161 sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) low > 40
Paraburkholderia graminis OAS925 0.61 ABIE53_001769 succinylornithine aminotransferase 0.06 ABIE53_001226 sulfite reductase (NADPH) hemoprotein beta-component low > 113
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS07695 acetylornithine aminotransferase 0.06 BPHYT_RS22415 nitrite reductase
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.06 H281DRAFT_00114 sulfite reductase (NADPH) beta subunit low > 103
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.47 ABIE51_RS15830 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.82 39
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.49 ABZR86_RS05900 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 74
Bosea sp. OAE506 0.44 ABIE41_RS04340 aspartate aminotransferase family protein 0.07 ABIE41_RS21305 NirA family protein
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_17070 astC acetylornithine transaminase 0.45 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 52
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1117.1 hypothetical protein 0.45 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.60 22
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.45 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 59
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.08 CCNA_01177 sulfite reductase, beta subunit low > 67
Caulobacter crescentus NA1000 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.08 CCNA_01177 sulfite reductase, beta subunit low > 66
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.08 Ga0059261_1498 Sulfite reductase, beta subunit (hemoprotein) 0.86 65
Azospirillum sp. SherDot2 0.39 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase 0.08 MPMX19_00652 Sulfite reductase [ferredoxin] low > 112
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24230 acetylornithine aminotransferase ArgD 0.08 PGA1_c20760 putative nitrite/sulfite reductase
Rhodospirillum rubrum S1H 0.38 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) 0.07 Rru_A1931 Ferredoxin--nitrite reductase (NCBI)
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0943 argD acetylornithine aminotransferase 0.30 Synpcc7942_0019 sir Sulfite reductase, ferredoxin dependent
Dechlorosoma suillum PS 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase 0.07 Dsui_1986 sulfite reductase, beta subunit (hemoprotein)
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS04665 acetylornithine transaminase 0.07 RALBFv3_RS04600 sulfite reductase
Ralstonia solanacearum UW163 0.34 UW163_RS09005 acetylornithine transaminase 0.07 UW163_RS09070 sulfite reductase
Mycobacterium tuberculosis H37Rv 0.34 Rv1655 Probable acetylornithine aminotransferase ArgD 0.10 Rv2391 Ferredoxin-dependent sulfite reductase SirA
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS00285 acetylornithine transaminase 0.07 ABZR87_RS00210 nitrite/sulfite reductase 0.72 10
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12095 acetylornithine transaminase 0.46 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS16670 acetylornithine aminotransferase 0.09 HSERO_RS15550 sulfite reductase
Ralstonia solanacearum PSI07 0.33 RPSI07_RS12720 acetylornithine transaminase 0.07 RPSI07_RS12775 nitrite/sulfite reductase

Not shown: 33 genomes with orthologs for HER17_RS01910 only; 0 genomes with orthologs for HER17_RS04240 only