Conservation of cofitness between HEPCGN_04695 and HEPCGN_15325 in Escherichia coli ECOR38

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04695 ruvB Holliday junction branch migration DNA helicase RuvB 1.0 HEPCGN_15325 prlC oligopeptidase A low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS10360 Holliday junction branch migration DNA helicase RuvB 1.00 ECOLIN_RS19985 oligopeptidase A — —
Escherichia coli ECRC99 1.00 KEDOAH_01820 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 KEDOAH_11730 prlC oligopeptidase A — —
Escherichia coli ECRC102 1.00 NIAGMN_01775 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 NIAGMN_14180 prlC oligopeptidase A — —
Escherichia coli ECOR27 1.00 NOLOHH_16730 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 NOLOHH_08350 prlC oligopeptidase A — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01868 Holliday junction ATP-dependent DNA helicase RuvB 1.00 OHPLBJKB_00205 Oligopeptidase A — —
Escherichia fergusonii Becca 1.00 EFB2_02082 Holliday junction ATP-dependent DNA helicase RuvB 1.00 EFB2_00317 Oligopeptidase A — —
Escherichia coli BW25113 1.00 b1860 ruvB Holliday junction DNA helicase B (NCBI) 1.00 b3498 prlC oligopeptidase A (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_01831 ATP-dependent DNA helicase, component of RuvABC resolvasome 1.00 ECD_03347 oligopeptidase A — —
Escherichia coli ECRC98 1.00 JDDGAC_00860 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 JDDGAC_20045 prlC oligopeptidase A — —
Escherichia coli ECRC100 1.00 OKFHMN_26285 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 OKFHMN_16415 prlC oligopeptidase A — —
Escherichia coli ECRC101 1.00 MCAODC_19120 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 MCAODC_06930 prlC oligopeptidase A — —
Escherichia coli ECRC62 1.00 BNILDI_15520 ruvB Holliday junction branch migration DNA helicase RuvB 1.00 BNILDI_03210 prlC oligopeptidase A low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF1639 Holliday junction DNA helicase RuvB 0.94 GFF517 Oligopeptidase A (EC 3.4.24.70) — —
Enterobacter sp. TBS_079 0.95 MPMX20_02766 Holliday junction ATP-dependent DNA helicase RuvB 0.94 MPMX20_04397 Oligopeptidase A low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0696 Holliday junction DNA helicase subunit RuvB 0.94 EX28DRAFT_4063 Zn-dependent oligopeptidases — —
Klebsiella michiganensis M5al 0.95 BWI76_RS18145 Holliday junction branch migration DNA helicase RuvB 0.92 BWI76_RS26610 oligopeptidase A — —
Dickeya dadantii 3937 0.87 DDA3937_RS10085 Holliday junction branch migration DNA helicase RuvB 0.83 DDA3937_RS21265 oligopeptidase A — —
Dickeya dianthicola ME23 0.87 DZA65_RS10530 Holliday junction branch migration DNA helicase RuvB 0.83 DZA65_RS00035 oligopeptidase A — —
Pantoea sp. MT58 0.87 IAI47_08450 Holliday junction branch migration DNA helicase RuvB 0.86 IAI47_01345 oligopeptidase A low > 76
Dickeya dianthicola 67-19 0.87 HGI48_RS10115 Holliday junction branch migration DNA helicase RuvB 0.82 HGI48_RS00045 oligopeptidase A — —
Pectobacterium carotovorum WPP14 0.86 HER17_RS11840 Holliday junction branch migration DNA helicase RuvB 0.85 HER17_RS21300 oligopeptidase A 0.62 21
Serratia liquefaciens MT49 0.86 IAI46_14620 Holliday junction branch migration DNA helicase RuvB 0.83 IAI46_24210 oligopeptidase A — —
Rahnella sp. WP5 0.86 EX31_RS11670 Holliday junction branch migration DNA helicase RuvB 0.82 EX31_RS05165 oligopeptidase A — —
Erwinia tracheiphila SCR3 0.85 LU632_RS13410 ruvB Holliday junction branch migration DNA helicase RuvB 0.85 LU632_RS19470 prlC oligopeptidase A — —
Alteromonas macleodii MIT1002 0.81 MIT1002_01333 Holliday junction ATP-dependent DNA helicase RuvB 0.64 MIT1002_03633 Oligopeptidase A — —
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.72 CSW01_01010 oligopeptidase A low > 62
Shewanella amazonensis SB2B 0.79 Sama_1839 ruvB Holliday junction DNA helicase RuvB (RefSeq) 0.64 Sama_3546 oligopeptidase A (RefSeq) low > 62
Shewanella sp. ANA-3 0.78 Shewana3_1957 ruvB Holliday junction DNA helicase RuvB (RefSeq) 0.65 Shewana3_4051 oligopeptidase A (RefSeq) — —
Shewanella oneidensis MR-1 0.77 SO2429 ruvB Holliday junction DNA helicase RuvB (NCBI ptt file) 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.77 Shew_2075 ruvB Holliday junction DNA helicase B (RefSeq) 0.66 Shew_3657 oligopeptidase A (RefSeq) low > 60
Marinobacter adhaerens HP15 0.76 HP15_2040 Holliday junction ATP-dependent DNA helicase RuvB 0.57 HP15_3759 oligopeptidase A-like protein — —
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_1136 Holliday junction DNA helicase subunit RuvB 0.60 B158DRAFT_0457 Zn-dependent oligopeptidases low > 40
Pseudomonas putida KT2440 0.74 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.57 PP_0096 oligopeptidase A low > 96
Pseudomonas sp. S08-1 0.74 OH686_19135 Holliday junction DNA helicase RuvB 0.56 OH686_12360 Oligopeptidase A low > 80
Paraburkholderia graminis OAS925 0.73 ABIE53_003495 Holliday junction DNA helicase RuvB 0.48 ABIE53_002798 oligopeptidase A low > 113
Pseudomonas simiae WCS417 0.73 PS417_22445 ATP-dependent DNA helicase RuvB 0.57 PS417_00245 oligopeptidase A low > 88
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS16620 holliday junction ATP-dependent DNA helicase RuvB 0.48 BPHYT_RS12875 oligopeptidase A — —
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_04255 Holliday junction DNA helicase subunit RuvB 0.47 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A — —
Pseudomonas fluorescens SBW25 0.73 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB 0.56 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1853 Holliday junction DNA helicase RuvB 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) low > 87
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS26800 Holliday junction branch migration DNA helicase RuvB 0.48 QEN71_RS05695 M3 family metallopeptidase — —
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB 0.56 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_03580 ATP-dependent DNA helicase RuvB 0.56 AO353_10775 oligopeptidase A low > 101
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_637 Holliday junction DNA helicase RuvB 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5537 Holliday junction DNA helicase RuvB 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS11665 Holliday junction branch migration DNA helicase RuvB 0.47 RALBFv3_RS01690 oligopeptidase A — —
Ralstonia solanacearum PSI07 0.72 RPSI07_RS21555 Holliday junction branch migration DNA helicase RuvB 0.46 RPSI07_RS15795 oligopeptidase A — —
Ralstonia solanacearum UW163 0.72 UW163_RS01920 Holliday junction branch migration DNA helicase RuvB 0.47 UW163_RS15000 oligopeptidase A — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS07620 Holliday junction branch migration DNA helicase RuvB 0.46 ABZR87_RS13490 M3 family metallopeptidase low > 80
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_18025 ATP-dependent DNA helicase RuvB 0.57 AO356_11120 oligopeptidase A low > 104
Pseudomonas sp. RS175 0.72 PFR28_03412 Holliday junction ATP-dependent DNA helicase RuvB 0.57 PFR28_04699 Oligopeptidase A low > 88
Ralstonia solanacearum GMI1000 0.72 RS_RS02485 Holliday junction branch migration DNA helicase RuvB 0.47 RS_RS08035 oligopeptidase A — —
Dechlorosoma suillum PS 0.72 Dsui_0484 Holliday junction DNA helicase, RuvB subunit 0.49 Dsui_0046 Zn-dependent oligopeptidase — —
Pseudomonas stutzeri RCH2 0.72 Psest_1497 Holliday junction DNA helicase, RuvB subunit 0.57 Psest_4320 Zn-dependent oligopeptidases — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.72 GFF1665 Holliday junction DNA helicase RuvB 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) — —
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS02700 ATP-dependent DNA helicase RuvB 0.46 RR42_RS07340 oligopeptidase A — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_1410 Holliday junction DNA helicase RuvB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_1410 Holliday junction DNA helicase RuvB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS02095 Holliday junction DNA helicase RuvB 0.48 HSERO_RS07290 oligopeptidase A low > 78
Variovorax sp. SCN45 0.71 GFF2090 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) 0.44 GFF963 Oligopeptidase A (EC 3.4.24.70) low > 127
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10830 Holliday junction branch migration DNA helicase RuvB 0.50 ABZR86_RS14940 M3 family metallopeptidase low > 74
Acidovorax sp. GW101-3H11 0.70 Ac3H11_4685 Holliday junction DNA helicase RuvB 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) — —
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1439.1 Holliday junction DNA helicase RuvB 0.46 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) — —
Variovorax sp. OAS795 0.70 ABID97_RS24875 Holliday junction branch migration DNA helicase RuvB 0.45 ABID97_RS14080 M3 family metallopeptidase — —
Acinetobacter radioresistens SK82 0.70 MPMX26_02186 Holliday junction ATP-dependent DNA helicase RuvB 0.46 MPMX26_02685 Oligopeptidase A low > 36
Castellaniella sp019104865 MT123 0.70 ABCV34_RS07990 Holliday junction branch migration DNA helicase RuvB 0.43 ABCV34_RS04180 M3 family metallopeptidase — —
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_01850 ruvB Holliday junction branch migration DNA helicase RuvB 0.49 OKGIIK_15380 dcp oligopeptidase A — —
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04900 Holliday junction branch migration DNA helicase RuvB 0.48 LRK54_RS08615 M3 family metallopeptidase — —
Rhodanobacter denitrificans MT42 0.69 LRK55_RS04680 Holliday junction branch migration DNA helicase RuvB 0.48 LRK55_RS08380 M3 family metallopeptidase — —
Bacteroides stercoris CC31F 0.57 HMPREF1181_RS02130 Holliday junction branch migration DNA helicase RuvB 0.34 HMPREF1181_RS06150 M3 family metallopeptidase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.57 BT3285 Holliday junction DNA helicase ruvB (NCBI ptt file) 0.33 BT4262 peptidyl-dipeptidase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.57 BACOVA_00895 Holliday junction DNA helicase RuvB 0.33 BACOVA_05095 peptidase family M3 — —

Not shown: 29 genomes with orthologs for HEPCGN_04695 only; 0 genomes with orthologs for HEPCGN_15325 only