Conservation of cofitness between GFF963 and GFF765 in Sphingobium sp. HT1-2

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF963 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 1.0 GFF765 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.95 1
Sphingomonas koreensis DSMZ 15582 0.67 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.82 Ga0059261_1800 Glutamate synthase domain 2 low > 68
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS18540 branched-chain amino acid aminotransferase 0.39 ABZR87_RS02570 glutamate synthase-related protein low > 80
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.40 RR42_RS18990 glutamate synthase low > 128
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS16875 branched-chain amino acid aminotransferase 0.39 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS18230 branched-chain amino acid aminotransferase 0.39 UW163_RS06700 glutamate synthase subunit alpha — —
Rhizobium sp. OAE497 0.64 ABIE40_RS11350 branched-chain amino acid aminotransferase 0.40 ABIE40_RS16275 glutamate synthase large subunit — —
Ralstonia solanacearum GMI1000 0.63 RS_RS23675 branched-chain amino acid aminotransferase 0.39 RS_RS14860 glutamate synthase subunit alpha — —
Sinorhizobium meliloti 1021 0.61 SMc02896 branched-chain amino acid aminotransferase 0.39 SMc04028 glutamate synthase low > 103
Rhodopseudomonas palustris CGA009 0.59 TX73_022650 branched-chain amino acid aminotransferase 0.40 TX73_004590 glutamate synthase large subunit — —
Mycobacterium tuberculosis H37Rv 0.52 Rv2210c Branched-chain amino acid transaminase IlvE 0.38 Rv3859c Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT) — —
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.37 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.70 8
Bifidobacterium breve UCC2003 0.50 BBR_RS15210 branched-chain amino acid aminotransferase 0.37 BBR_RS15255 glutamate synthase large subunit 0.41 16
Shewanella amazonensis SB2B 0.37 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.39 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS22095 branched-chain amino acid aminotransferase 0.42 ABZR88_RS06905 glutamate synthase large subunit — —
Shewanella oneidensis MR-1 0.37 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.39 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.37 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.39 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) low > 73
Shewanella loihica PV-4 0.37 Shew_0278 branched-chain amino acid aminotransferase (RefSeq) 0.39 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) low > 60
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_2202 branched-chain amino acid aminotransferase, group II 0.39 Echvi_1244 Glutamate synthase domain 2 0.32 53
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS22650 branched chain amino acid aminotransferase 0.41 CA265_RS08700 glutamate synthase large subunit 0.82 55
Cellulophaga baltica 18 0.34 M666_RS19255 branched-chain amino acid aminotransferase 0.41 M666_RS01740 glutamate synthase large subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.39 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.39 Psyr_0411 glutamate synthase (NADPH) large subunit 0.62 24
Pseudomonas sp. SVBP6 0.31 COO64_RS09990 branched-chain amino acid aminotransferase 0.39 COO64_RS13085 gltB glutamate synthase large subunit low > 93
Pseudomonas putida KT2440 0.30 PP_3511 Branched-chain-amino-acid aminotransferase 0.39 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Pseudomonas sp. BP01 0.30 JOY50_RS06005 branched-chain amino acid aminotransferase 0.40 JOY50_RS09320 gltB glutamate synthase large subunit 0.81 67
Pseudomonas simiae WCS417 0.30 PS417_17565 branched-chain amino acid aminotransferase 0.40 PS417_02000 glutamate synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS19375 branched-chain amino acid aminotransferase 0.39 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas sp. DMC3 0.30 GFF1604 putative branched-chain-amino-acid aminotransferase 0.39 GFF3102 Glutamate synthase [NADPH] large chain 0.99 1
Pseudomonas fluorescens SBW25 0.30 PFLU_RS19375 branched-chain amino acid aminotransferase 0.39 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_3544 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.40 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas orientalis W4I3 0.30 QF045_RS19115 branched-chain amino acid aminotransferase 0.40 QF045_RS05060 glutamate synthase large subunit 0.97 13
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_03807 Branched-chain-amino-acid aminotransferase 0.39 GEMAOFIL_00632 Glutamate synthase [NADPH] large chain low > 96
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.40 AO356_09375 glutamate synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.40 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.39 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas sp. RS175 0.29 PFR28_02449 putative branched-chain-amino-acid aminotransferase 0.39 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_26655 branched-chain amino acid aminotransferase 0.39 AO353_12515 glutamate synthase low > 101
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS06865 branched-chain amino acid aminotransferase 0.38 HMPREF1181_RS16055 glutamate synthase large subunit low > 56
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) 0.38 BT0553 glutamate synthase, large subunit (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.28 BACOVA_01113 branched-chain-amino-acid transaminase 0.39 BACOVA_03756 class II glutamine amidotransferase low > 96
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS02220 branched-chain amino acid aminotransferase 0.39 HMPREF1058_RS06920 glutamate synthase large subunit low > 67
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS01415 branched-chain amino acid aminotransferase 0.39 ABI39_RS20685 glutamate synthase large subunit low > 72
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS07855 branched-chain amino acid aminotransferase 0.38 HMPREF1078_RS01270 glutamate synthase large subunit low > 61
Alteromonas macleodii MIT1002 0.23 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.39 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor 0.97 7
Pectobacterium carotovorum WPP14 0.19 HER17_RS01070 branched-chain amino acid transaminase 0.39 HER17_RS19910 glutamate synthase large subunit low > 75
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.40 BPHYT_RS17855 glutamate synthase low > 109
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS02410 branched-chain amino acid transaminase 0.40 QEN71_RS28010 glutamate synthase-related protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme 0.40 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Ralstonia solanacearum PSI07 0.14 RPSI07_RS21175 branched-chain amino acid transaminase 0.39 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS11580 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.37 ABZR86_RS16795 glutamate synthase large subunit low > 74
Rhodanobacter denitrificans MT42 0.14 LRK55_RS09980 branched-chain amino acid transaminase 0.38 LRK55_RS10665 glutamate synthase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.14 OKGIIK_11840 ilvE branched-chain amino acid transaminase 0.39 OKGIIK_15200 Glutamate synthase subunit alpha low > 53
Pseudomonas aeruginosa PA14 0.14 IKLFDK_28470 branched-chain-amino-acid transaminase 0.39 IKLFDK_28355 glutamate synthase large subunit low > 98
Pseudomonas aeruginosa MRSN321 0.14 DY961_RS10870 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.39 DY961_RS11000 gltB;go_function=catalytic glutamate synthase large subunit low > 100
Rhodanobacter denitrificans FW104-10B01 0.14 LRK54_RS12020 branched-chain amino acid transaminase 0.38 LRK54_RS10960 glutamate synthase large subunit low > 59
Pseudomonas aeruginosa PUPa3 0.14 DQ20_RS51190 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.39 DQ20_RS51075 gltB;go_function=catalytic glutamate synthase large subunit low > 101
Rhodanobacter sp000427505 FW510-R12 0.14 LRK53_RS03115 branched-chain amino acid transaminase 0.38 LRK53_RS00070 glutamate synthase-related protein 0.74 31
Pseudomonas segetis P6 0.14 ACVTMO_RS20880 branched-chain amino acid transaminase 0.39 ACVTMO_RS20985 gltB glutamate synthase large subunit low > 75
Pseudomonas stutzeri RCH2 0.14 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.40 Psest_3711 Glutamate synthase domain 2 low > 67
Pseudomonas sp. S08-1 0.14 OH686_09695 branched-chain amino acid aminotransferase 0.40 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Synechococcus elongatus PCC 7942 0.13 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase 0.40 Synpcc7942_0890 glsF glutamate synthase (ferredoxin) — —
Synechocystis sp000284455 PCC 6803 0.12 SGL_RS16510 branched-chain amino acid transaminase 0.40 SGL_RS17380 glutamate synthase large subunit — —
Bosea sp. OAE506 0.10 ABIE41_RS11405 branched-chain amino acid aminotransferase 0.40 ABIE41_RS08565 glutamate synthase large subunit low > 77
Xanthobacter sp. DMC5 0.09 GFF1936 Branched-chain-amino-acid aminotransferase 0.40 GFF2524 Ferredoxin-dependent glutamate synthase 1 — —

Not shown: 6 genomes with orthologs for GFF963 only; 46 genomes with orthologs for GFF765 only