Conservation of cofitness between GFF2034 and GFF763 in Sphingobium sp. HT1-2

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2034 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 1.0 GFF763 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.69 20
Sinorhizobium meliloti 1021 0.61 SMc03924 glycogen synthase 0.25 SMc04026 glutamate synthase 0.46 16
Agrobacterium fabrum C58 0.57 Atu4075 glycogen synthase 0.25 Atu3783 glutamate synthase subunit beta 0.39 13
Rhodopseudomonas palustris CGA009 0.53 TX73_001985 glycogen synthase GlgA 0.30 TX73_004595 glutamate synthase subunit beta
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04861 starch synthase 0.28 H281DRAFT_05621 glutamate synthase (NADH) small subunit low > 103
Dickeya dadantii 3937 0.45 DDA3937_RS19730 glycogen synthase GlgA 0.41 DDA3937_RS01660 FAD-dependent oxidoreductase low > 74
Dickeya dianthicola 67-19 0.44 HGI48_RS19840 glycogen synthase GlgA 0.41 HGI48_RS01555 glutamate synthase small subunit low > 71
Azospirillum sp. SherDot2 0.44 MPMX19_02225 Glycogen synthase 0.67 MPMX19_02658 Glutamate synthase [NADPH] small chain
Pectobacterium carotovorum WPP14 0.44 HER17_RS01500 glycogen synthase GlgA 0.41 HER17_RS19915 glutamate synthase small subunit low > 75
Dickeya dianthicola ME23 0.43 DZA65_RS20915 glycogen synthase GlgA 0.41 DZA65_RS01630 FAD-dependent oxidoreductase 0.41 49
Klebsiella michiganensis M5al 0.43 BWI76_RS26200 starch synthase 0.40 BWI76_RS25320 glutamate synthase low > 92
Klebsiella pneumoniae MKP103 0.43 KDGMDA_07085 glycogen synthase GlgA 0.40 KDGMDA_06150 Glutamate synthase [NADPH] small chain low > 95
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07615 glycogen synthase 0.28 BPHYT_RS17850 dihydropyrimidine dehydrogenase subunit A
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS23430 glycogen synthase GlgA 0.28 QEN71_RS28005 glutamate synthase subunit beta low > 153
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.40 EX28DRAFT_3276 glutamate synthase small subunit family protein, proteobacterial low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.40 GFF2957 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 78
Enterobacter sp. TBS_079 0.42 MPMX20_04311 Glycogen synthase 0.40 MPMX20_04127 Glutamate synthase [NADPH] small chain low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00272 Glycogen synthase 0.40 OHPLBJKB_00487 Glutamate synthase [NADPH] small chain low > 74
Escherichia coli ECRC98 0.42 JDDGAC_20530 glgA glycogen synthase GlgA 0.40 JDDGAC_21505 gltD glutamate synthase subunit GltD 0.68 10
Escherichia fergusonii Becca 0.42 EFB2_00390 Glycogen synthase 0.40 EFB2_00610 Glutamate synthase [NADPH] small chain low > 86
Escherichia coli ECRC101 0.42 MCAODC_07430 glgA glycogen synthase GlgA 0.40 MCAODC_08400 gltD glutamate synthase subunit GltD 0.53 4
Escherichia coli ECOR27 0.42 NOLOHH_08690 glgA glycogen synthase GlgA 0.40 NOLOHH_09680 gltD glutamate synthase subunit GltD low > 76
Escherichia coli ECRC102 0.42 NIAGMN_14670 glgA glycogen synthase GlgA 0.40 NIAGMN_15640 gltD glutamate synthase subunit GltD low > 80
Escherichia coli ECRC100 0.42 OKFHMN_16900 glgA glycogen synthase GlgA 0.40 OKFHMN_17880 gltD glutamate synthase subunit GltD low > 79
Escherichia coli ECOR38 0.42 HEPCGN_15715 glgA glycogen synthase GlgA 0.40 HEPCGN_16755 gltD glutamate synthase subunit GltD 0.35 42
Escherichia coli Nissle 1917 0.42 ECOLIN_RS19625 glycogen synthase GlgA 0.40 ECOLIN_RS18480 glutamate synthase subunit GltD low > 55
Escherichia coli ECRC62 0.42 BNILDI_02825 glgA glycogen synthase GlgA 0.40 BNILDI_01855 gltD glutamate synthase subunit GltD low > 75
Escherichia coli ECRC99 0.42 KEDOAH_11240 glgA glycogen synthase GlgA 0.40 KEDOAH_10270 gltD glutamate synthase subunit GltD
Escherichia coli BW25113 0.42 b3429 glgA glycogen synthase (NCBI) 0.40 b3213 gltD glutamate synthase, 4Fe-4S protein, small subunit (NCBI) low > 76
Escherichia coli BL21 0.42 ECD_03281 glycogen synthase 0.40 ECD_03078 glutamate synthase, 4Fe-4S protein, small subunit low > 61
Magnetospirillum magneticum AMB-1 0.41 AMB_RS10650 glycogen synthase 0.59 AMB_RS02690 dihydropyrimidine dehydrogenase subunit A
Variovorax sp. OAS795 0.41 ABID97_RS04535 glycogen synthase GlgA 0.26 ABID97_RS23220 glutamate synthase subunit beta low > 91
Methylophilus sp. DMC18 0.40 GFF1174 Glycogen synthase 0.26 GFF2800 Glutamate synthase [NADPH] small chain
Variovorax sp. SCN45 0.40 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.25 GFF5333 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 127
Rahnella sp. WP5 0.40 EX31_RS05010 glycogen synthase GlgA 0.40 EX31_RS12510 FAD-dependent oxidoreductase 0.48 75
Serratia liquefaciens MT49 0.40 IAI46_23925 glycogen synthase GlgA 0.41 IAI46_22350 glutamate synthase small subunit low > 87
Rhodospirillum rubrum S1H 0.39 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI) 0.63 Rru_A0018 Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI)
Paraburkholderia graminis OAS925 0.39 ABIE53_001742 starch synthase 0.28 ABIE53_003732 glutamate synthase (NADPH/NADH) small chain
Marinobacter adhaerens HP15 0.39 HP15_1713 glycogen/starch synthase, ADP-glucose type 0.39 HP15_483 oxidoreductase Fe-S binding subunit
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS17230 glycogen synthase GlgA 0.26 ABZR87_RS02565 glutamate synthase subunit beta low > 80
Pseudomonas sp. S08-1 0.36 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.40 OH686_10000 Glutamate synthase [NADPH] small chain low > 80
Ralstonia solanacearum UW163 0.36 UW163_RS22835 glycogen synthase GlgA 0.24 UW163_RS06705 glutamate synthase subunit beta
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS22290 glycogen synthase GlgA 0.24 RALBFv3_RS06910 glutamate synthase subunit beta low > 76
Ralstonia solanacearum PSI07 0.36 RPSI07_RS00900 glycogen synthase GlgA 0.25 RPSI07_RS10325 glutamate synthase subunit beta low > 81
Ralstonia solanacearum GMI1000 0.36 RS_RS18320 glycogen synthase 0.25 RS_RS14855 glutamate synthase subunit beta low > 80
Pseudomonas stutzeri RCH2 0.35 Psest_2172 glycogen/starch synthases, ADP-glucose type 0.41 Psest_3710 glutamate synthase small subunit family protein, proteobacterial low > 67
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS12515 glycogen synthase 0.26 HSERO_RS19590 dihydropyrimidine dehydrogenase subunit A low > 78
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS39345 glgA;go_function=glycogen glycogen synthase GlgA 0.41 DQ20_RS51080 FAD-dependent oxidoreductase low > 101
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS17085 glgA;go_function=glycogen glycogen synthase GlgA 0.41 DY961_RS10995 FAD-dependent oxidoreductase low > 100
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_2992 Starch (bacterial glycogen) synthase 0.40 Psyr_0412 glutamate synthase (NADPH) small subunit low > 86
Pseudomonas aeruginosa PA14 0.35 IKLFDK_10595 glycogen synthase GlgA 0.41 IKLFDK_28360 glutamate synthase small subunit low > 98
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_2992 Starch (bacterial glycogen) synthase 0.40 Psyr_0412 glutamate synthase (NADPH) small subunit low > 86
Pseudomonas sp. RS175 0.34 PFR28_02145 Glycogen synthase 0.41 PFR28_05016 Glutamate synthase [NADPH] small chain low > 88
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_26025 glycogen synthase 0.41 AO356_09370 glutamate synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.41 Pf6N2E2_3751 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 103
Pseudomonas putida KT2440 0.33 PP_4050 glycogen synthase 0.41 PP_5075 glutamate synthase (NADPH) beta subunit low > 96
Pseudomonas sp. BP01 0.33 JOY50_RS06710 glgA glycogen synthase GlgA 0.41 JOY50_RS09325 FAD-dependent oxidoreductase low > 84
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.41 PfGW456L13_271 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 87
Pseudomonas sp. SVBP6 0.33 COO64_RS24815 glgA glycogen synthase GlgA 0.41 COO64_RS13090 FAD-dependent oxidoreductase low > 93
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_23775 glycogen synthase 0.40 AO353_12520 glutamate synthase low > 101
Pseudomonas sp. DMC3 0.33 GFF3482 Glycogen synthase 0.41 GFF3103 Glutamate synthase [NADPH] small chain low > 89
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.40 Pf1N1B4_1533 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 87
Pseudomonas orientalis W4I3 0.32 QF045_RS15315 glycogen synthase GlgA 0.40 QF045_RS05065 FAD-dependent oxidoreductase low > 93
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_03185 Glycogen synthase 0.40 GEMAOFIL_00633 Glutamate synthase [NADPH] small chain low > 96
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS16410 glycogen synthase GlgA 0.40 PFLU_RS02050 NAD(P)-binding protein low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS16410 glycogen synthase GlgA 0.40 PFLU_RS02050 NAD(P)-binding protein low > 109
Pseudomonas simiae WCS417 0.32 PS417_14480 glycogen synthase 0.40 PS417_02005 glutamate synthase low > 88
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.38 Xcc-8004.43.1 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 74
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_0841 glycogen/starch synthase, ADP-glucose type (RefSeq) 0.28 DvMF_0938 putative oxidoreductase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU2244 glgA glycogen synthase (TIGR) 0.28 DVU2476 gltA glutamate synthase, small subunit (TIGR) low > 55
Synechocystis sp000284455 PCC 6803 0.29 SGL_RS12525 glycogen synthase GlgA 0.26 SGL_RS02895 glutamate synthase small subunit low > 52
Bosea sp. OAE506 0.29 ABIE41_RS13060 glycogen synthase GlgA 0.26 ABIE41_RS08570 glutamate synthase subunit beta
Alteromonas macleodii MIT1002 0.26 MIT1002_00235 Glycogen synthase 0.38 MIT1002_03140 Glutamate synthase [NADPH] small chain 0.68 15
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS04140 glycogen synthase 0.25 CA265_RS08705 glutamate synthase low > 88
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_08685 glycogen synthase 0.39 CSW01_12035 glutamate synthase small subunit low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS18980 glycogen synthase 0.25 ABZR88_RS06910 glutamate synthase subunit beta low > 71
Shewanella loihica PV-4 0.16 Shew_1172 starch synthase (RefSeq) 0.40 Shew_1031 gltD glutamate synthase subunit beta (RefSeq) 0.37 50
Shewanella amazonensis SB2B 0.16 Sama_2449 starch synthase (RefSeq) 0.41 Sama_0856 gltD glutamate synthase subunit beta (RefSeq) low > 62
Shewanella sp. ANA-3 0.13 Shewana3_2930 starch synthase catalytic subunit (RefSeq) 0.40 Shewana3_3051 gltD glutamate synthase subunit beta (RefSeq) low > 73
Shewanella oneidensis MR-1 0.13 SO1499 glgA glycogen synthase (NCBI ptt file) 0.40 SO1324 gltD glutamate synthase, small subunit (NCBI ptt file) low > 76
Cellulophaga baltica 18 0.11 M666_RS00870 glycogen/starch synthase 0.26 M666_RS01745 glutamate synthase subunit beta low > 67

Not shown: 8 genomes with orthologs for GFF2034 only; 29 genomes with orthologs for GFF763 only