Conservation of cofitness between PS417_28050 and PS417_03830 in Pseudomonas simiae WCS417

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_28050 hypothetical protein 1.0 PS417_03830 protein disaggregation chaperone 0.51 9
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29735 HlyC/CorC family transporter 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29735 HlyC/CorC family transporter 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_09865 hypothetical protein 0.95 AO353_14230 ATP-dependent chaperone ClpB low > 101
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains 0.97 Pf6N2E2_5129 ClpB protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_11010 hypothetical protein 0.97 AO356_15935 ATP-dependent chaperone ClpB low > 104
Pseudomonas sp. RS175 0.91 PFR28_04481 hypothetical protein 0.97 PFR28_03746 Chaperone protein ClpB 0.41 70
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains 0.96 PfGW456L13_1495 ClpB protein 0.32 31
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal low > 86
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains 0.96 Pf1N1B4_2824 ClpB protein low > 87
Pseudomonas putida KT2440 0.85 PP_5322 putative metal ion transporter 0.93 PP_0625 Chaperone protein ClpB low > 96
Pseudomonas stutzeri RCH2 0.81 Psest_3847 Hemolysins and related proteins containing CBS domains 0.90 Psest_0711 ATP-dependent chaperone ClpB low > 67
Pseudomonas sp. S08-1 0.78 OH686_13455 Phosphate regulon metal ion transporter containing CBS domains 0.89 OH686_16420 ATP-dependent chaperone protein ClpB low > 80
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_06055 Hemolysin, contains CBS domains 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB low > 103
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS05435 hemolysin protein 0.65 HSERO_RS10545 protein disaggregation chaperone low > 78
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS33815 hypothetical protein 0.67 BPHYT_RS08990 protein disaggregation chaperone low > 109
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS17705 hemolysin family protein 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_004821 CBS domain containing-hemolysin-like protein 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB low > 113
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3404.1 FIG01211089: hypothetical protein 0.71 Xcc-8004.1382.1 ClpB protein low > 74
Rhodopseudomonas palustris CGA009 0.27 TX73_002605 hemolysin family protein 0.56 TX73_023005 ATP-dependent chaperone ClpB low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS23615 hemolysin 0.51 CA265_RS12775 ATP-dependent chaperone ClpB low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS17090 hemolysin family protein 0.53 ABZR88_RS10630 ATP-dependent chaperone ClpB low > 71
Synechococcus elongatus PCC 7942 0.18 Synpcc7942_2595 hypothetical protein 0.57 Synpcc7942_1089 clpB ATPase low > 38
Shewanella oneidensis MR-1 0.17 SO2815 CBS domain protein (NCBI ptt file) 0.70 SO3577 clpB clpB protein (NCBI ptt file) 0.30 75
Mycobacterium tuberculosis H37Rv 0.17 Rv1842c Conserved hypothetical membrane protein 0.54 Rv0384c Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1)
Sinorhizobium meliloti 1021 0.16 SMc00240 hypothetical protein 0.57 SMc02433 ATP-dependent protease low > 103
Bifidobacterium breve UCC2003 0.16 BBR_RS10445 HlyC/CorC family transporter 0.52 BBR_RS19700 ATP-dependent chaperone ClpB 0.88 2
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS19900 hemolysin family protein 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB low > 74
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS05310 HlyC/CorC family transporter 0.52 HMPREF1181_RS11960 ATP-dependent chaperone ClpB low > 56
Rhodanobacter sp. FW510-T8 0.15 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family 0.70 OKGIIK_01800 clpB ATP-dependent chaperone ClpB low > 52
Bacteroides thetaiotaomicron VPI-5482 0.15 BT0148 putative hemolysin (NCBI ptt file) 0.52 BT4597 endopeptidase Clp ATP-binding chain B (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.15 BACOVA_01289 hypothetical protein 0.52 BACOVA_05393 ATP-dependent chaperone protein ClpB low > 94
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS00430 hemolysin family protein 0.51 HMPREF1078_RS00500 ATP-dependent chaperone ClpB low > 61
Lysobacter sp. OAE881 0.15 ABIE51_RS06575 hemolysin family protein 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.14 DVU2148 CBS/transporter associated domain protein (TIGR) 0.55 DVU1874 clpB ATP-dependent Clp protease, ATP-binding subunit ClpB (TIGR) low > 55
Pectobacterium carotovorum WPP14 0.14 HER17_RS03970 hemolysin family protein 0.70 HER17_RS05410 ATP-dependent chaperone ClpB low > 75
Rhodanobacter denitrificans FW104-10B01 0.14 LRK54_RS12975 hemolysin family protein 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB low > 59
Rhodanobacter denitrificans MT42 0.14 LRK55_RS12675 hemolysin family protein 0.70 LRK55_RS04735 ATP-dependent chaperone ClpB low > 63
Pantoea sp. MT58 0.13 IAI47_02710 HlyC/CorC family transporter 0.70 IAI47_04435 ATP-dependent chaperone ClpB low > 76
Variovorax sp. SCN45 0.13 GFF2520 UPF0053 inner membrane protein YtfL 0.64 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) low > 127
Serratia liquefaciens MT49 0.13 IAI46_01760 HlyC/CorC family transporter 0.69 IAI46_03995 ATP-dependent chaperone ClpB low > 86
Variovorax sp. OAS795 0.13 ABID97_RS07170 hemolysin family protein 0.64 ABID97_RS10930 ATP-dependent chaperone ClpB low > 91
Ralstonia solanacearum GMI1000 0.13 RS_RS11430 HlyC/CorC family transporter 0.64 RS_RS06695 chaperone protein ClpB low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF871 Putative membrane protein 0.70 GFF4184 ClpB protein low > 78
Klebsiella michiganensis M5al 0.12 BWI76_RS02765 membrane protein 0.70 BWI76_RS21440 ATP-dependent chaperone ClpB low > 92
Dickeya dadantii 3937 0.12 DDA3937_RS17170 HlyC/CorC family transporter 0.69 DDA3937_RS16100 ATP-dependent chaperone ClpB low > 74
Dickeya dianthicola ME23 0.12 DZA65_RS18310 HlyC/CorC family transporter 0.69 DZA65_RS17320 ATP-dependent chaperone ClpB low > 75
Dickeya dianthicola 67-19 0.12 HGI48_RS17225 HlyC/CorC family transporter 0.69 HGI48_RS16225 ATP-dependent chaperone ClpB low > 71
Escherichia coli Nissle 1917 0.12 ECOLIN_RS24495 hemolysin family protein 0.70 ECOLIN_RS14665 ATP-dependent chaperone ClpB
Enterobacter sp. TBS_079 0.12 MPMX20_00495 hypothetical protein 0.70 MPMX20_03461 Chaperone protein ClpB low > 85
Escherichia coli ECRC101 0.12 OKFHMN_12015 paeA Polyamine export protein 0.70 OKFHMN_21265 clpB ATP-dependent chaperone ClpB
Escherichia coli ECOR27 0.12 NOLOHH_04280 paeA Polyamine export protein 0.70 NOLOHH_12940 clpB ATP-dependent chaperone ClpB low > 57
Escherichia coli ECRC101 0.12 MCAODC_02530 paeA Polyamine export protein 0.70 MCAODC_11795 clpB ATP-dependent chaperone ClpB
Escherichia coli ECRC98 0.12 JDDGAC_15655 paeA Polyamine export protein 0.70 JDDGAC_24930 clpB ATP-dependent chaperone ClpB
Escherichia coli ECRC99 0.12 KEDOAH_16140 paeA Polyamine export protein 0.70 KEDOAH_06955 clpB ATP-dependent chaperone ClpB
Escherichia coli ECRC102 0.12 NIAGMN_09865 paeA Polyamine export protein 0.70 NIAGMN_19035 clpB ATP-dependent chaperone ClpB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.12 OHPLBJKB_03816 hypothetical protein 0.70 OHPLBJKB_01114 Chaperone protein ClpB low > 73
Escherichia coli ECOR38 0.12 HEPCGN_10215 paeA Polyamine export protein 0.70 HEPCGN_20390 clpB ATP-dependent chaperone ClpB low > 85
Escherichia coli BW25113 0.12 b4218 ytfL predicted inner membrane protein (NCBI) 0.70 b2592 clpB protein disaggregation chaperone (NCBI) low > 76
Escherichia coli BL21 0.12 ECD_04089 UPF0053 family inner membrane protein 0.70 ECD_02482 protein disaggregation chaperone low > 60
Escherichia coli ECRC62 0.12 BNILDI_07240 tlyC Polyamine export protein 0.70 BNILDI_11745 clpB ATP-dependent chaperone ClpB
Enterobacter asburiae PDN3 0.12 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains 0.70 EX28DRAFT_2693 ATP-dependent chaperone ClpB low > 76
Escherichia fergusonii Becca 0.12 EFB2_04311 hypothetical protein 0.70 EFB2_01298 Chaperone protein ClpB low > 86
Erwinia tracheiphila SCR3 0.12 LU632_RS02100 hemolysin family protein 0.70 LU632_RS16935 clpB ATP-dependent chaperone ClpB low > 74
Rahnella sp. WP5 0.12 EX31_RS08705 HlyC/CorC family transporter 0.69 EX31_RS07560 ATP-dependent chaperone ClpB low > 89
Shewanella amazonensis SB2B 0.12 Sama_3284 hemolysin, putative (RefSeq) 0.70 Sama_2603 clpB protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.11 Shewana3_0353 hypothetical protein (RefSeq) 0.70 Shewana3_3169 ATPase (RefSeq) low > 73

Not shown: 0 genomes with orthologs for PS417_28050 only; 34 genomes with orthologs for PS417_03830 only