| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_4191 | | Transcriptional regulator | 1.0 | Psest_0654 | | Methylase of chemotaxis methyl-accepting proteins | 0.23 | 19 |
| Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | 0.44 | Pf6N2E2_415 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_0202 | | transcriptional regulator, LysR family | 0.44 | Psyr_0783 | | MCP methyltransferase, CheR-type | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_0202 | | transcriptional regulator, LysR family | 0.44 | Psyr_0783 | | MCP methyltransferase, CheR-type | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.87 | AO356_12385 | | LysR family transcriptional regulator | 0.44 | AO356_22655 | | SAM-dependent methyltransferase | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.87 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.43 | PFLU_RS24975 | | SAM-dependent methyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.87 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.43 | PFLU_RS24975 | | SAM-dependent methyltransferase | low | > 109 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | 0.44 | PFR28_01432 | | Chemotaxis protein methyltransferase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.86 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | 0.65 | OH686_21845 | | Chemotaxis protein methyltransferase CheR | low | > 80 |
| Dechlorosoma suillum PS | 0.54 | Dsui_0823 | | transcriptional regulator | 0.47 | Dsui_1434 | | methylase of chemotaxis methyl-accepting protein | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | 0.28 | ABCV34_RS05820 | | CheR family methyltransferase | low | > 48 |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | 0.31 | RALBFv3_RS17405 | | chemotaxis protein CheR | low | > 76 |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | 0.31 | UW163_RS21745 | | chemotaxis protein CheR | — | — |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | 0.31 | RPSI07_RS06240 | | chemotaxis protein CheR | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | 0.30 | RS_RS23905 | | chemotaxis protein CheR | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | 0.27 | QEN71_RS28995 | | CheR family methyltransferase | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | 0.27 | ABIE53_000121 | | chemotaxis protein methyltransferase CheR | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.31 | ABZR87_RS17980 | | CheR family methyltransferase | 0.54 | 42 |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS18935 | | LysR family transcriptional regulator | 0.39 | HSERO_RS03125 | | SAM-dependent methyltransferase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS17385 | | LysR family transcriptional regulator | 0.29 | RR42_RS35795 | | chemotaxis protein CheR | low | > 128 |
| Variovorax sp. SCN45 | 0.47 | GFF5549 | | Hydrogen peroxide-inducible genes activator => OxyR | 0.29 | GFF5765 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | 0.27 | Ac3H11_1423 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF2803 | | Hydrogen peroxide-inducible genes activator | 0.29 | GFF1477 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 90 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | 0.28 | MPMX19_06747 | | Chemotaxis protein methyltransferase | low | > 112 |
| Dickeya dianthicola ME23 | 0.37 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | 0.29 | DZA65_RS14060 | | protein-glutamate O-methyltransferase CheR | low | > 75 |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | 0.29 | HGI48_RS13575 | | protein-glutamate O-methyltransferase CheR | low | > 71 |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | 0.30 | DDA3937_RS13530 | | protein-glutamate O-methyltransferase CheR | low | > 74 |
| Escherichia coli ECRC62 | 0.37 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | BNILDI_15375 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli BW25113 | 0.37 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | 0.34 | b1884 | cheR | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | HEPCGN_04565 | cheR | protein-glutamate O-methyltransferase CheR | low | > 85 |
| Escherichia coli ECRC101 | 0.37 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | OKFHMN_26145 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | 0.34 | OHPLBJKB_01844 | | Chemotaxis protein methyltransferase | low | > 73 |
| Escherichia coli ECRC99 | 0.37 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | KEDOAH_01960 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia fergusonii Becca | 0.37 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | 0.35 | EFB2_02059 | | Chemotaxis protein methyltransferase | low | > 86 |
| Escherichia coli ECRC98 | 0.37 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | JDDGAC_00720 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli ECRC101 | 0.37 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | MCAODC_19260 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | NOLOHH_16585 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli BL21 | 0.37 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | 0.34 | ECD_01855 | | chemotaxis regulator, protein-glutamate methyltransferase | — | — |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | 0.35 | ECOLIN_RS10760 | | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | 0.35 | NIAGMN_01915 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | 0.30 | HER17_RS08115 | | protein-glutamate O-methyltransferase CheR | low | > 75 |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | 0.34 | MPMX20_02788 | | Chemotaxis protein methyltransferase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_4424 | | Transcriptional regulator | 0.34 | EX28DRAFT_0672 | | Methylase of chemotaxis methyl-accepting proteins | — | — |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS31340 | | LysR family transcriptional regulator | 0.25 | AZOBR_RS14250 | | chemotaxis protein | low | > 97 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF2347 | | Hydrogen peroxide-inducible genes activator | 0.35 | GFF1665 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 78 |
| Rahnella sp. WP5 | 0.35 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | 0.31 | EX31_RS11365 | | protein-glutamate O-methyltransferase CheR | low | > 89 |
| Serratia liquefaciens MT49 | 0.35 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | 0.27 | IAI46_16020 | | protein-glutamate O-methyltransferase CheR | low | > 86 |
| Pantoea sp. MT58 | 0.35 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | 0.31 | IAI47_08325 | | protein-glutamate O-methyltransferase CheR | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.35 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | 0.30 | LU632_RS13530 | cheR | protein-glutamate O-methyltransferase CheR | low | > 74 |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A2782 | | Transcriptional Regulator, LysR family (NCBI) | 0.36 | Rru_A1405 | | MCP methyltransferase, CheR-type (NCBI) | low | > 58 |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | 0.29 | OKGIIK_02905 | | Chemotaxis protein methyltransferase | low | > 52 |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | 0.36 | CSW01_19530 | | Chemotaxis protein methyltransferase 3 | low | > 62 |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_03811 | | LysR-family transcriptional regulator | 0.26 | CCNA_00444 | | chemotaxis protein methyltransferase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_03811 | | LysR-family transcriptional regulator | 0.26 | CCNA_00444 | | chemotaxis protein methyltransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.32 | Ga0059261_0159 | | Transcriptional regulator | 0.33 | Ga0059261_1083 | | Methylase of chemotaxis methyl-accepting proteins | low | > 68 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | 0.40 | Xcc-8004.1769.1 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | 0.33 | LRK54_RS13660 | | protein-glutamate O-methyltransferase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | 0.33 | LRK55_RS13400 | | protein-glutamate O-methyltransferase | low | > 63 |
| Lysobacter sp. OAE881 | 0.31 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | 0.24 | ABIE51_RS16950 | | CheR family methyltransferase | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | 0.29 | PGA1_262p02100 | | methyltransferase, cheR type | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | 0.28 | ABZR86_RS22215 | | protein-glutamate O-methyltransferase CheR | low | > 74 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | 0.33 | ABIE41_RS01670 | | protein-glutamate O-methyltransferase | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.26 | TX73_002235 | | LysR substrate-binding domain-containing protein | 0.32 | TX73_000710 | | methyltransferase domain-containing protein | low | > 86 |
| Shewanella oneidensis MR-1 | 0.25 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.39 | SO2325 | cheR-3 | chemotaxis protein methyltransferase CheR (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | 0.31 | Shewana3_2215 | | MCP methyltransferase, CheR-type (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.24 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | 0.26 | Sama_3498 | | protein-glutamate O-methyltransferase (RefSeq) | low | > 62 |
| Rhizobium sp. OAE497 | 0.23 | ABIE40_RS15045 | | hydrogen peroxide-inducible genes activator | 0.30 | ABIE40_RS15980 | | CheR family methyltransferase | low | > 107 |
| Shewanella loihica PV-4 | 0.23 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | 0.30 | Shew_0110 | | MCP methyltransferase, CheR-type (RefSeq) | low | > 60 |
Not shown: 27 genomes with orthologs for Psest_4191 only; 2 genomes with orthologs for Psest_0654 only