Conservation of cofitness between PS417_03830 and PS417_28050 in Pseudomonas simiae WCS417

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03830 protein disaggregation chaperone 1.0 PS417_28050 hypothetical protein 0.51 11
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 1.00 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 1.00 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_5129 ClpB protein 0.91 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15935 ATP-dependent chaperone ClpB 0.91 AO356_11010 hypothetical protein low > 104
Pseudomonas sp. RS175 0.97 PFR28_03746 Chaperone protein ClpB 0.91 PFR28_04481 hypothetical protein 0.41 68
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1495 ClpB protein 0.89 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2824 ClpB protein 0.89 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14230 ATP-dependent chaperone ClpB 0.92 AO353_09865 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas putida KT2440 0.93 PP_0625 Chaperone protein ClpB 0.85 PP_5322 putative metal ion transporter low > 96
Pseudomonas stutzeri RCH2 0.90 Psest_0711 ATP-dependent chaperone ClpB 0.81 Psest_3847 Hemolysins and related proteins containing CBS domains low > 67
Pseudomonas sp. S08-1 0.89 OH686_16420 ATP-dependent chaperone protein ClpB 0.78 OH686_13455 Phosphate regulon metal ion transporter containing CBS domains low > 80
Lysobacter sp. OAE881 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB 0.15 ABIE51_RS06575 hemolysin family protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.1382.1 ClpB protein 0.42 Xcc-8004.3404.1 FIG01211089: hypothetical protein low > 74
Enterobacter sp. TBS_079 0.70 MPMX20_03461 Chaperone protein ClpB 0.12 MPMX20_00495 hypothetical protein low > 85
Erwinia tracheiphila SCR3 0.70 LU632_RS16935 clpB ATP-dependent chaperone ClpB 0.12 LU632_RS02100 hemolysin family protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4184 ClpB protein 0.13 GFF871 Putative membrane protein low > 78
Escherichia coli Nissle 1917 0.70 ECOLIN_RS14665 ATP-dependent chaperone ClpB 0.12 ECOLIN_RS24495 hemolysin family protein
Escherichia coli ECOR38 0.70 HEPCGN_20390 clpB ATP-dependent chaperone ClpB 0.12 HEPCGN_10215 paeA Polyamine export protein low > 85
Escherichia coli BW25113 0.70 b2592 clpB protein disaggregation chaperone (NCBI) 0.12 b4218 ytfL predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC102 0.70 NIAGMN_19035 clpB ATP-dependent chaperone ClpB 0.12 NIAGMN_09865 paeA Polyamine export protein
Escherichia coli ECRC98 0.70 JDDGAC_24930 clpB ATP-dependent chaperone ClpB 0.12 JDDGAC_15655 paeA Polyamine export protein
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01114 Chaperone protein ClpB 0.12 OHPLBJKB_03816 hypothetical protein low > 73
Escherichia fergusonii Becca 0.70 EFB2_01298 Chaperone protein ClpB 0.12 EFB2_04311 hypothetical protein low > 86
Escherichia coli ECRC101 0.70 MCAODC_11795 clpB ATP-dependent chaperone ClpB 0.12 MCAODC_02530 paeA Polyamine export protein
Escherichia coli BL21 0.70 ECD_02482 protein disaggregation chaperone 0.12 ECD_04089 UPF0053 family inner membrane protein low > 60
Escherichia coli ECRC62 0.70 BNILDI_11745 clpB ATP-dependent chaperone ClpB 0.12 BNILDI_07240 tlyC Polyamine export protein
Pantoea sp. MT58 0.70 IAI47_04435 ATP-dependent chaperone ClpB 0.13 IAI47_02710 HlyC/CorC family transporter low > 76
Escherichia coli ECRC101 0.70 OKFHMN_21265 clpB ATP-dependent chaperone ClpB 0.12 OKFHMN_12015 paeA Polyamine export protein
Escherichia coli ECOR27 0.70 NOLOHH_12940 clpB ATP-dependent chaperone ClpB 0.12 NOLOHH_04280 paeA Polyamine export protein low > 57
Escherichia coli ECRC99 0.70 KEDOAH_06955 clpB ATP-dependent chaperone ClpB 0.12 KEDOAH_16140 paeA Polyamine export protein
Shewanella amazonensis SB2B 0.70 Sama_2603 clpB protein (RefSeq) 0.12 Sama_3284 hemolysin, putative (RefSeq) low > 62
Klebsiella michiganensis M5al 0.70 BWI76_RS21440 ATP-dependent chaperone ClpB 0.12 BWI76_RS02765 membrane protein low > 92
Shewanella oneidensis MR-1 0.70 SO3577 clpB clpB protein (NCBI ptt file) 0.17 SO2815 CBS domain protein (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2693 ATP-dependent chaperone ClpB 0.12 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Shewanella sp. ANA-3 0.70 Shewana3_3169 ATPase (RefSeq) 0.11 Shewana3_0353 hypothetical protein (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB 0.16 ABZR86_RS19900 hemolysin family protein low > 74
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_01800 clpB ATP-dependent chaperone ClpB 0.15 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family low > 52
Pectobacterium carotovorum WPP14 0.70 HER17_RS05410 ATP-dependent chaperone ClpB 0.14 HER17_RS03970 hemolysin family protein low > 75
Rhodanobacter denitrificans MT42 0.70 LRK55_RS04735 ATP-dependent chaperone ClpB 0.14 LRK55_RS12675 hemolysin family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB 0.14 LRK54_RS12975 hemolysin family protein low > 59
Dickeya dianthicola 67-19 0.69 HGI48_RS16225 ATP-dependent chaperone ClpB 0.12 HGI48_RS17225 HlyC/CorC family transporter low > 71
Dickeya dianthicola ME23 0.69 DZA65_RS17320 ATP-dependent chaperone ClpB 0.12 DZA65_RS18310 HlyC/CorC family transporter low > 75
Rahnella sp. WP5 0.69 EX31_RS07560 ATP-dependent chaperone ClpB 0.12 EX31_RS08705 HlyC/CorC family transporter low > 89
Dickeya dadantii 3937 0.69 DDA3937_RS16100 ATP-dependent chaperone ClpB 0.12 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Serratia liquefaciens MT49 0.69 IAI46_03995 ATP-dependent chaperone ClpB 0.13 IAI46_01760 HlyC/CorC family transporter low > 86
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB 0.43 QEN71_RS17705 hemolysin family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB 0.44 H281DRAFT_06055 Hemolysin, contains CBS domains low > 103
Paraburkholderia graminis OAS925 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB 0.42 ABIE53_004821 CBS domain containing-hemolysin-like protein low > 113
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS08990 protein disaggregation chaperone 0.43 BPHYT_RS33815 hypothetical protein low > 109
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10545 protein disaggregation chaperone 0.43 HSERO_RS05435 hemolysin protein low > 78
Ralstonia solanacearum GMI1000 0.64 RS_RS06695 chaperone protein ClpB 0.13 RS_RS11430 HlyC/CorC family transporter 0.41 54
Variovorax sp. SCN45 0.64 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.13 GFF2520 UPF0053 inner membrane protein YtfL low > 127
Variovorax sp. OAS795 0.64 ABID97_RS10930 ATP-dependent chaperone ClpB 0.13 ABID97_RS07170 hemolysin family protein low > 91
Sinorhizobium meliloti 1021 0.57 SMc02433 ATP-dependent protease 0.16 SMc00240 hypothetical protein low > 103
Synechococcus elongatus PCC 7942 0.57 Synpcc7942_1089 clpB ATPase 0.18 Synpcc7942_2595 hypothetical protein low > 38
Rhodopseudomonas palustris CGA009 0.56 TX73_023005 ATP-dependent chaperone ClpB 0.27 TX73_002605 hemolysin family protein low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU1874 clpB ATP-dependent Clp protease, ATP-binding subunit ClpB (TIGR) 0.14 DVU2148 CBS/transporter associated domain protein (TIGR) low > 55
Mycobacterium tuberculosis H37Rv 0.54 Rv0384c Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) 0.17 Rv1842c Conserved hypothetical membrane protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.53 ABZR88_RS10630 ATP-dependent chaperone ClpB 0.21 ABZR88_RS17090 hemolysin family protein low > 71
Bifidobacterium breve UCC2003 0.52 BBR_RS19700 ATP-dependent chaperone ClpB 0.16 BBR_RS10445 HlyC/CorC family transporter 0.88 19
Bacteroides ovatus ATCC 8483 0.52 BACOVA_05393 ATP-dependent chaperone protein ClpB 0.15 BACOVA_01289 hypothetical protein 0.42 43
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS11960 ATP-dependent chaperone ClpB 0.16 HMPREF1181_RS05310 HlyC/CorC family transporter low > 56
Bacteroides thetaiotaomicron VPI-5482 0.52 BT4597 endopeptidase Clp ATP-binding chain B (NCBI ptt file) 0.15 BT0148 putative hemolysin (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS12775 ATP-dependent chaperone ClpB 0.24 CA265_RS23615 hemolysin low > 88
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS00500 ATP-dependent chaperone ClpB 0.15 HMPREF1078_RS00430 hemolysin family protein low > 61

Not shown: 34 genomes with orthologs for PS417_03830 only; 0 genomes with orthologs for PS417_28050 only