Conservation of cofitness between PS417_02485 and PS417_28050 in Pseudomonas simiae WCS417

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 1.0 PS417_28050 hypothetical protein 0.36 8
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 1.00 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 1.00 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_13140 tRNA dimethylallyltransferase 0.92 AO353_09865 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_155 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.89 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.89 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains — —
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3615 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.91 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains — —
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_08660 tRNA dimethylallyltransferase 0.91 AO356_11010 hypothetical protein 0.39 14
Pseudomonas sp. RS175 0.86 PFR28_05120 tRNA dimethylallyltransferase 0.91 PFR28_04481 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_0571 tRNA isopentenyltransferase 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_0571 tRNA isopentenyltransferase 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas putida KT2440 0.77 PP_4895 tRNA dimethylallyltransferase 0.85 PP_5322 putative metal ion transporter low > 96
Pseudomonas stutzeri RCH2 0.75 Psest_0682 tRNA dimethylallyltransferase 0.81 Psest_3847 Hemolysins and related proteins containing CBS domains — —
Pseudomonas sp. S08-1 0.73 OH686_09475 tRNA dimethylallyltransferase 0.78 OH686_13455 Phosphate regulon metal ion transporter containing CBS domains low > 80
Escherichia coli BL21 0.59 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 0.12 ECD_04089 UPF0053 family inner membrane protein low > 60
Escherichia coli ECOR27 0.59 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 NOLOHH_04280 paeA Polyamine export protein — —
Escherichia coli BW25113 0.59 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) 0.12 b4218 ytfL predicted inner membrane protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03871 tRNA dimethylallyltransferase 0.12 OHPLBJKB_03816 hypothetical protein — —
Klebsiella michiganensis M5al 0.59 BWI76_RS02530 tRNA dimethylallyltransferase 0.12 BWI76_RS02765 membrane protein 0.25 62
Escherichia coli ECOR38 0.59 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 HEPCGN_10215 paeA Polyamine export protein low > 85
Escherichia coli Nissle 1917 0.59 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 ECOLIN_RS24495 hemolysin family protein low > 52
Escherichia coli ECRC101 0.59 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 OKFHMN_12015 paeA Polyamine export protein — —
Escherichia coli ECRC99 0.59 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 KEDOAH_16140 paeA Polyamine export protein — —
Escherichia coli ECRC98 0.59 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 JDDGAC_15655 paeA Polyamine export protein — —
Escherichia coli ECRC101 0.59 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 MCAODC_02530 paeA Polyamine export protein — —
Escherichia fergusonii Becca 0.59 EFB2_04364 tRNA dimethylallyltransferase 0.12 EFB2_04311 hypothetical protein 0.50 9
Escherichia coli ECRC62 0.59 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 BNILDI_07240 tlyC Polyamine export protein — —
Escherichia coli ECRC102 0.59 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 NIAGMN_09865 paeA Polyamine export protein — —
Enterobacter asburiae PDN3 0.59 EX28DRAFT_3368 tRNA dimethylallyltransferase 0.12 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Enterobacter sp. TBS_079 0.58 MPMX20_00452 tRNA dimethylallyltransferase 0.12 MPMX20_00495 hypothetical protein low > 85
Dickeya dadantii 3937 0.58 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 DZA65_RS18310 HlyC/CorC family transporter low > 75
Rahnella sp. WP5 0.58 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 EX31_RS08705 HlyC/CorC family transporter low > 89
Dickeya dianthicola 67-19 0.58 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 HGI48_RS17225 HlyC/CorC family transporter low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 HER17_RS03970 hemolysin family protein low > 75
Shewanella oneidensis MR-1 0.58 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) 0.17 SO2815 CBS domain protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.57 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.13 IAI46_01760 HlyC/CorC family transporter low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.13 GFF871 Putative membrane protein low > 78
Pantoea sp. MT58 0.57 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.13 IAI47_02710 HlyC/CorC family transporter low > 76
Shewanella amazonensis SB2B 0.56 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.12 Sama_3284 hemolysin, putative (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.11 Shewana3_0353 hypothetical protein (RefSeq) — —
Erwinia tracheiphila SCR3 0.54 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.12 LU632_RS02100 hemolysin family protein low > 74
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_06625 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.15 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.16 ABZR86_RS19900 hemolysin family protein — —
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS04185 tRNA delta(2)-isopentenylpyrophosphate transferase 0.43 HSERO_RS05435 hemolysin protein — —
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS00635 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 LRK54_RS12975 hemolysin family protein low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS00405 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 LRK55_RS12675 hemolysin family protein — —
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04711 tRNA dimethylallyltransferase 0.44 H281DRAFT_06055 Hemolysin, contains CBS domains — —
Paraburkholderia graminis OAS925 0.51 ABIE53_000875 tRNA dimethylallyltransferase 0.42 ABIE53_004821 CBS domain containing-hemolysin-like protein low > 113
Ralstonia solanacearum GMI1000 0.51 RS_RS12855 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.13 RS_RS11430 HlyC/CorC family transporter low > 80
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS26440 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.43 QEN71_RS17705 hemolysin family protein — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS03645 tRNA dimethylallyltransferase 0.43 BPHYT_RS33815 hypothetical protein low > 109
Lysobacter sp. OAE881 0.47 ABIE51_RS06535 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.15 ABIE51_RS06575 hemolysin family protein low > 62
Variovorax sp. OAS795 0.46 ABID97_RS20320 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.13 ABID97_RS07170 hemolysin family protein — —
Variovorax sp. SCN45 0.46 GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.13 GFF2520 UPF0053 inner membrane protein YtfL — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3121.1 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.42 Xcc-8004.3404.1 FIG01211089: hypothetical protein — —
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_2490 miaA tRNA delta(2)-isopentenylpyrophosphate transferase 0.18 Synpcc7942_2595 hypothetical protein low > 38
Sinorhizobium meliloti 1021 0.28 SMc01435 tRNA delta(2)-isopentenylpyrophosphate transferase 0.16 SMc00240 hypothetical protein — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS17470 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.21 ABZR88_RS17090 hemolysin family protein — —
Rhodopseudomonas palustris CGA009 0.26 TX73_010460 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.27 TX73_002605 hemolysin family protein low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS02960 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 CA265_RS23615 hemolysin low > 88
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU1533 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (TIGR) 0.14 DVU2148 CBS/transporter associated domain protein (TIGR) — —
Bifidobacterium breve UCC2003 0.24 BBR_RS16565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.16 BBR_RS10445 HlyC/CorC family transporter — —
Bacteroides ovatus ATCC 8483 0.24 BACOVA_05050 tRNA dimethylallyltransferase 0.15 BACOVA_01289 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.23 BT4203 tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) 0.15 BT0148 putative hemolysin (NCBI ptt file) — —
Mycobacterium tuberculosis H37Rv 0.23 Rv2727c Probable tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) (isopentenyl-diphosphate:tRNA isopentenyltransferase) (iptase) (IPPT) 0.17 Rv1842c Conserved hypothetical membrane protein — —
Bacteroides stercoris CC31F 0.22 HMPREF1181_RS06385 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.16 HMPREF1181_RS05310 HlyC/CorC family transporter low > 56
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS13930 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.15 HMPREF1078_RS00430 hemolysin family protein low > 61

Not shown: 34 genomes with orthologs for PS417_02485 only; 0 genomes with orthologs for PS417_28050 only