| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF1294 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 1.0 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.67 | 15 |
| Acidovorax sp. GW101-3H11 | 0.82 | Ac3H11_4751 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 0.90 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Variovorax sp. OAS795 | 0.76 | ABID97_RS22980 | | cytochrome bc complex cytochrome b subunit | 0.89 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 91 |
| Variovorax sp. SCN45 | 0.75 | GFF6695 | | Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) | 0.89 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.75 | HSERO_RS20240 | | cytochrome B | 0.80 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_05670 | | ubiquinol-cytochrome c reductase cytochrome b subunit | 0.80 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.71 | RR42_RS18820 | | cytochrome B | 0.80 | RR42_RS17105 | | Clp protease ClpX | 0.39 | 119 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS27780 | | cytochrome bc complex cytochrome b subunit | 0.80 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum UW163 | 0.70 | UW163_RS06890 | | cytochrome b | 0.80 | UW163_RS08860 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.70 | RALBFv3_RS06725 | | cytochrome b | 0.80 | RALBFv3_RS04810 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS12630 | | cytochrome bc complex cytochrome b subunit | 0.72 | ABCV34_RS05305 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Burkholderia phytofirmans PsJN | 0.70 | BPHYT_RS17625 | | cytochrome B | 0.80 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.69 | ABZR87_RS02380 | | cytochrome bc complex cytochrome b subunit | 0.81 | ABZR87_RS00435 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.68 | RPSI07_RS10510 | | cytochrome b | 0.80 | RPSI07_RS12575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 81 |
| Dechlorosoma suillum PS | 0.68 | Dsui_1813 | | cytochrome b subunit of the bc complex | 0.75 | Dsui_0009 | | ATP-dependent Clp protease ATP-binding subunit clpA | — | — |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS14670 | | cytochrome b | 0.81 | RS_RS12370 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Marinobacter adhaerens HP15 | 0.57 | HP15_546 | | ubiquinol-cytochrome c reductase, cytochrome b | 0.62 | HP15_2080 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.57 | Pf6N2E2_5338 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 0.62 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.44 | 31 |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_17070 | | cytochrome B | 0.62 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 104 |
| Pseudomonas sp. RS175 | 0.57 | PFR28_03605 | | Cytochrome b | 0.63 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_15250 | | cytochrome B | 0.62 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_961 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 0.62 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_08385 | | Ubiquinol-cytochrome C reductase, cytochrome B subunit | 0.63 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1635 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 0.62 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS04200 | | cytochrome bc complex cytochrome b subunit | 0.62 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS04200 | | cytochrome bc complex cytochrome b subunit | 0.62 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas simiae WCS417 | 0.55 | PS417_04160 | | cytochrome B | 0.63 | PS417_16510 | | Clp protease ClpX | — | — |
| Pseudomonas putida KT2440 | 0.55 | PP_1318 | | Cytochrome b | 0.62 | PP_4008 | | ATP-dependent serine protease | 0.46 | 14 |
| Kangiella aquimarina DSM 16071 | 0.55 | B158DRAFT_2101 | | Cytochrome b subunit of the bc complex | 0.61 | B158DRAFT_1505 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 40 |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_3278 | | Cytochrome b subunit of the bc complex | 0.62 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | — | — |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_0602 | | cytochrome b/b6 domain-containing protein (RefSeq) | 0.61 | Shewana3_1753 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.52 | SO0609 | petB | ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) | 0.61 | SO2626 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.52 | Sama_3020 | | ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) | 0.62 | Sama_2056 | | ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.52 | Shew_0571 | | cytochrome b/b6 domain-containing protein (RefSeq) | 0.61 | Shew_1566 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_03050 | | cytochrome b | 0.60 | CSW01_05805 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 62 |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS15435 | | cytochrome bc complex cytochrome b subunit | 0.63 | ABIE51_RS11490 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.86 | 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.2229.1 | | Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) | 0.62 | Xcc-8004.2754.1 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS13770 | | cytochrome bc complex cytochrome b subunit | 0.62 | LRK54_RS00420 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS13485 | | cytochrome bc complex cytochrome b subunit | 0.62 | LRK55_RS00160 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_03010 | qcrB,petB | cytochrome b | 0.62 | OKGIIK_06890 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS01575 | | cytochrome bc complex cytochrome b subunit | 0.62 | ABZR86_RS02200 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.45 | MIT1002_00815 | | Cytochrome b/c1 | 0.62 | MIT1002_01834 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 70 |
| Sphingomonas koreensis DSMZ 15582 | 0.40 | Ga0059261_3220 | | Cytochrome b subunit of the bc complex | 0.58 | Ga0059261_1001 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 68 |
| Rhizobium sp. OAE497 | 0.39 | ABIE40_RS13125 | | cytochrome b N-terminal domain-containing protein | 0.58 | ABIE40_RS08865 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 107 |
| Agrobacterium fabrum C58 | 0.39 | Atu2238 | | ubiquinol-cytochrome c reductase cytochrome b subunit | 0.56 | Atu1364 | | ATP-dependent Clp protease, ATP-binding subunit | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.39 | SMc00188 | | cytochrome B transmembrane protein | 0.58 | SMc02109 | | ATP-dependent Clp protease ATP-binding subunit protein | — | — |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS11195 | | cytochrome b/b6 | 0.59 | ABIE41_RS18235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.44 | 60 |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_05013 | | Cytochrome b | 0.58 | MPMX19_00503 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 112 |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A0363 | | Cytochrome b/b6-like (NCBI) | 0.59 | Rru_A2109 | | ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) | — | — |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_00506 | | cytochrome b | 0.59 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_00506 | | cytochrome b | 0.59 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.37 | PGA1_c33990 | | cytochrome b | 0.57 | PGA1_c25150 | | ATP-dependent Clp protease ATP-binding subunit | — | — |
| Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS20750 | | cytochrome B | 0.58 | AZOBR_RS05175 | | ATP-dependent Clp protease ATP-binding protein | 0.42 | 42 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS02565 | | cytochrome b N-terminal domain-containing protein | 0.58 | A4249_RS08390 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.37 | Dshi_3277 | | Cytochrome b/b6 domain (RefSeq) | 0.58 | Dshi_2939 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | — | — |
Not shown: 1 genomes with orthologs for GFF1294 only; 35 genomes with orthologs for GFF4521 only