Conservation of cofitness between GFF1593 and GFF4513 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1593 Multidrug resistance protein B 1.0 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.46 4
Klebsiella michiganensis M5al 0.93 BWI76_RS22100 multidrug effux MFS transporter subunit EmrB 0.99 BWI76_RS07940 alkyl hydroperoxide reductase subunit C low > 92
Escherichia coli Nissle 1917 0.92 ECOLIN_RS14970 multidrug efflux MFS transporter permease subunit EmrB 0.99 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C low > 55
Escherichia coli ECOR38 0.92 HEPCGN_19970 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C low > 87
Escherichia coli ECRC101 0.92 MCAODC_11300 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C low > 87
Escherichia coli BW25113 0.92 b2686 emrB multidrug efflux system protein (NCBI) 0.99 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Escherichia coli BL21 0.92 ECD_02541 multidrug efflux system protein 0.99 ECD_00574 alkyl hydroperoxide reductase, C22 subunit low > 61
Escherichia coli ECRC102 0.92 NIAGMN_18545 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC98 0.92 JDDGAC_24440 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C low > 86
Escherichia fergusonii Becca 0.92 EFB2_01242 Multidrug export protein EmrB 0.99 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Escherichia coli ECRC99 0.92 KEDOAH_07360 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECOR27 0.92 NOLOHH_12615 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C low > 75
Escherichia coli ECRC100 0.92 OKFHMN_20775 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_01047 Multidrug export protein EmrB 0.99 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 73
Escherichia coli ECRC62 0.92 BNILDI_11175 emrB multidrug efflux MFS transporter permease subunit EmrB 0.99 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C low > 75
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2769 drug resistance transporter, EmrB/QacA subfamily 0.99 EX28DRAFT_2350 peroxiredoxin low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_03564 Multidrug export protein EmrB 0.99 MPMX20_01271 Alkyl hydroperoxide reductase C low > 85
Pantoea sp. MT58 0.86 IAI47_04495 multidrug efflux MFS transporter permease subunit EmrB 0.93 IAI47_06790 alkyl hydroperoxide reductase subunit C low > 76
Pectobacterium carotovorum WPP14 0.83 HER17_RS04460 multidrug efflux MFS transporter permease subunit EmrB 0.90 HER17_RS02545 alkyl hydroperoxide reductase subunit C low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS16835 multidrug efflux MFS transporter permease subunit EmrB 0.90 HGI48_RS02460 alkyl hydroperoxide reductase subunit C low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS17910 multidrug efflux MFS transporter permease subunit EmrB 0.90 DZA65_RS02565 alkyl hydroperoxide reductase subunit C low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS16765 multidrug efflux MFS transporter permease subunit EmrB 0.90 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C low > 74
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS11225 DHA2 family efflux MFS transporter permease subunit 0.62 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C low > 80
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS15695 MFS transporter 0.61 RALBFv3_RS22270 peroxiredoxin low > 76
Ralstonia solanacearum GMI1000 0.54 RS_RS06475 MFS transporter 0.62 RS_RS18335 peroxiredoxin low > 80
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS19670 DSBA oxidoreductase 0.72 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C
Ralstonia solanacearum PSI07 0.53 RPSI07_RS17660 MFS transporter 0.61 RPSI07_RS00930 peroxiredoxin low > 81
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_02341 MFS transporter, DHA2 family, multidrug resistance protein 0.72 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF3757 Inner membrane component of tripartite multidrug resistance system 0.61 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.32 64
Paraburkholderia graminis OAS925 0.52 ABIE53_000311 DHA2 family multidrug resistance protein 0.73 ABIE53_005904 peroxiredoxin low > 113
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS23085 DHA2 family efflux MFS transporter permease subunit 0.72 QEN71_RS13380 alkyl hydroperoxide reductase subunit C low > 153
Rhodanobacter denitrificans MT42 0.51 LRK55_RS15865 DHA2 family efflux MFS transporter permease subunit 0.77 LRK55_RS00480 alkyl hydroperoxide reductase subunit C low > 63
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS16115 DHA2 family efflux MFS transporter permease subunit 0.77 LRK54_RS00705 alkyl hydroperoxide reductase subunit C low > 59
Variovorax sp. SCN45 0.51 GFF4771 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) 0.61 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS12830 multidrug resistance protein B 0.28 RR42_RS07870 alkyl hydroperoxide reductase low > 128
Rhodospirillum rubrum S1H 0.50 Rru_A0858 Drug resistance transporter EmrB/QacA subfamily (NCBI) 0.75 Rru_A1418 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI)
Castellaniella sp019104865 MT123 0.50 ABCV34_RS05950 DHA2 family efflux MFS transporter permease subunit 0.74 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit 0.75 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit 0.75 PFLU_RS14570 peroxiredoxin low > 109
Variovorax sp. OAS795 0.50 ABID97_RS20390 DHA2 family efflux MFS transporter permease subunit 0.61 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Pseudomonas simiae WCS417 0.50 PS417_16910 multidrug resistance protein B 0.75 PS417_14045 alkyl hydroperoxide reductase low > 88
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS13575 DSBA oxidoreductase 0.72 HSERO_RS21540 alkyl hydroperoxide reductase subunit C low > 78
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14765 DHA2 family efflux MFS transporter permease subunit 0.76 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C low > 74
Acidovorax sp. GW101-3H11 0.49 Ac3H11_2352 Inner membrane component of tripartite multidrug resistance system 0.60 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas sp. RS175 0.49 PFR28_02747 Multidrug export protein EmrB 0.74 PFR28_02482 Alkyl hydroperoxide reductase C low > 88
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_08535 emrB MFS transporter 0.78 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C 0.52 35
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_27840 multidrug resistance protein B 0.74 AO353_26965 alkyl hydroperoxide reductase low > 101
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2606 Inner membrane component of tripartite multidrug resistance system 0.75 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 87
Pseudomonas putida KT2440 0.49 PP_3548 multidrug efflux transport system - permease subunit 0.75 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit low > 96
Lysobacter sp. OAE881 0.48 ABIE51_RS07705 DHA2 family efflux MFS transporter permease subunit 0.77 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C low > 62
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_4002 Inner membrane component of tripartite multidrug resistance system 0.75 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_01025 multidrug resistance protein B 0.75 AO356_22805 alkyl hydroperoxide reductase low > 104
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily 0.75 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily 0.75 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_149 Inner membrane component of tripartite multidrug resistance system 0.75 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3524.1 Inner membrane component of tripartite multidrug resistance system 0.61 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 74
Acinetobacter radioresistens SK82 0.38 MPMX26_02394 Multidrug export protein EmrB 0.78 MPMX26_02009 Alkyl hydroperoxide reductase C low > 36
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_1099 drug resistance transporter, EmrB/QacA subfamily (RefSeq) 0.46 DvMF_0219 Peroxiredoxin (RefSeq) low > 51
Azospirillum sp. SherDot2 0.29 MPMX19_04034 Multidrug export protein EmrB 0.76 MPMX19_05835 Alkyl hydroperoxide reductase C low > 112
Shewanella sp. ANA-3 0.29 Shewana3_2224 EmrB/QacA family drug resistance transporter (RefSeq) 0.71 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) low > 73
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_4005 drug resistance transporter, EmrB/QacA subfamily 0.74 Ga0059261_0155 peroxiredoxin low > 68
Shewanella loihica PV-4 0.23 Shew_3405 EmrB/QacA family drug resistance transporter (RefSeq) 0.72 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) low > 60
Shewanella oneidensis MR-1 0.23 SO0525 drug resistance transporter, EmrB/QacA family protein (NCBI ptt file) 0.71 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.22 Sama_0403 drug resistance transporter, EmrB/QacA family protein (RefSeq) 0.71 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq) low > 62
Pseudomonas sp. S08-1 0.22 OH686_04570 Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system 0.65 OH686_18680 peroxiredoxin low > 80
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS14985 DHA2 family efflux MFS transporter permease subunit 0.77 A4249_RS04540 alkyl hydroperoxide reductase subunit C low > 48
Caulobacter crescentus NA1000 0.21 CCNA_03831 major facilitator superfamily transporter 0.77 CCNA_03012 peroxiredoxin low > 66
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03831 major facilitator superfamily transporter 0.77 CCNA_03012 peroxiredoxin
Ralstonia solanacearum UW163 0.18 UW163_RS07870 MFS transporter 0.61 UW163_RS22815 peroxiredoxin
Dechlorosoma suillum PS 0.12 Dsui_1523 drug resistance transporter, EmrB/QacA subfamily 0.61 Dsui_1901 peroxiredoxin low > 51

Not shown: 13 genomes with orthologs for GFF1593 only; 13 genomes with orthologs for GFF4513 only